FFCP PHASE1:Hg19::chr10:73588807..73588828,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:73588807..73588828,- | |||
|coexpression_cluster_id=C143 | |||
|description=CAGE_peak_at_chr10:73588807..73588828,- | |||
|id=chr10:73588807..73588828,- | |||
|ontology_enrichment_celltype=CL:0000766!3.50e-26!76;CL:0002194!3.68e-26!63;CL:0000576!3.68e-26!63;CL:0000040!3.68e-26!63;CL:0000559!3.68e-26!63;CL:0002057!1.12e-25!42;CL:0002009!2.87e-25!65;CL:0000860!6.68e-24!45;CL:0000839!1.41e-23!70;CL:0000557!1.76e-23!71;CL:0000763!2.00e-10!112;CL:0000049!2.00e-10!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.44e-21;33!CL:0002057;3.44e-21;33!CL:0000473;4.15e-21;39!CL:0000234;4.15e-21;39!CL:0000576;5.11e-17;48!CL:0000766;3.46e-13;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.12e-30,48;CL:0000234,1.12e-30,48;CL:0002194,3.15e-29,59;CL:0000576,3.15e-29,59;CL:0000040,3.15e-29,59;CL:0000559,3.15e-29,59;CL:0000766,8.11e-29,72;CL:0002009,5.85e-28,61;CL:0000860,1.15e-26,42;CL:0002057,1.15e-26,42;CL:0000839,8.08e-26,66;CL:0000557,9.47e-26,67;CL:0000763,8.82e-12,108;CL:0000049,8.82e-12,108 | |||
|ontology_enrichment_development_v019=CL:0002057;7.32e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.88e-19!80;UBERON:0001474!1.87e-16!86;UBERON:0004765!8.60e-16!101;UBERON:0001434!8.60e-16!101;UBERON:0003081!4.94e-15!216;UBERON:0002390!1.18e-14!102;UBERON:0003061!1.18e-14!102;UBERON:0002193!4.79e-14!112;UBERON:0002405!6.29e-13!115;UBERON:0002204!4.65e-12!167;UBERON:0000926!9.28e-10!448;UBERON:0004120!9.28e-10!448;UBERON:0006603!9.28e-10!448;UBERON:0000468!5.86e-09!659;UBERON:0000467!4.34e-08!625;UBERON:0000480!5.24e-08!626;UBERON:0000062!1.27e-07!511;UBERON:0000922!3.12e-07!612;UBERON:0000923!7.84e-07!604;UBERON:0005291!7.84e-07!604;UBERON:0006598!7.84e-07!604;UBERON:0002532!7.84e-07!604;UBERON:0002050!8.58e-07!605;UBERON:0005423!8.58e-07!605 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.31e-21,76;UBERON:0001474,1.73e-18,82;UBERON:0004765,2.22e-18,90;UBERON:0001434,6.83e-18,100;UBERON:0003081,1.02e-17,203;UBERON:0000926,1.10e-17,315;UBERON:0004120,1.10e-17,315;UBERON:0006603,1.10e-17,315;UBERON:0002405,1.60e-16,93;UBERON:0002390,2.30e-16,98;UBERON:0003061,2.30e-16,98;UBERON:0002193,9.02e-16,108;UBERON:0002204,6.13e-13,167;UBERON:0000923,2.37e-07,560;UBERON:0010316,2.37e-07,560;UBERON:0005291,2.37e-07,560;UBERON:0006598,2.37e-07,560;UBERON:0010317,2.37e-07,560;UBERON:0002532,2.37e-07,560;UBERON:0002050,2.88e-07,564 | |||
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| |||
|short_description=p@chr10:73588807..73588828,- | |||
}} |
Latest revision as of 15:20, 23 July 2015
Short description: | p@chr10:73588807..73588828, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:73588807..73588828, - |
Coexpression cluster: | C143_Monocytederived_CD14_Macrophage_Dendritic_Basophils_CD14CD16_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.12e-30 | 48 |
phagocyte | 1.12e-30 | 48 |
monopoietic cell | 3.15e-29 | 59 |
monocyte | 3.15e-29 | 59 |
monoblast | 3.15e-29 | 59 |
promonocyte | 3.15e-29 | 59 |
myeloid leukocyte | 8.11e-29 | 72 |
macrophage dendritic cell progenitor | 5.85e-28 | 61 |
classical monocyte | 1.15e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.15e-26 | 42 |
myeloid lineage restricted progenitor cell | 8.08e-26 | 66 |
granulocyte monocyte progenitor cell | 9.47e-26 | 67 |
myeloid cell | 8.82e-12 | 108 |
common myeloid progenitor | 8.82e-12 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.31e-21 | 76 |
bone element | 1.73e-18 | 82 |
skeletal element | 2.22e-18 | 90 |
skeletal system | 6.83e-18 | 100 |
lateral plate mesoderm | 1.02e-17 | 203 |
mesoderm | 1.10e-17 | 315 |
mesoderm-derived structure | 1.10e-17 | 315 |
presumptive mesoderm | 1.10e-17 | 315 |
immune system | 1.60e-16 | 93 |
hematopoietic system | 2.30e-16 | 98 |
blood island | 2.30e-16 | 98 |
hemolymphoid system | 9.02e-16 | 108 |
musculoskeletal system | 6.13e-13 | 167 |
germ layer | 2.37e-07 | 560 |
germ layer / neural crest | 2.37e-07 | 560 |
embryonic tissue | 2.37e-07 | 560 |
presumptive structure | 2.37e-07 | 560 |
germ layer / neural crest derived structure | 2.37e-07 | 560 |
epiblast (generic) | 2.37e-07 | 560 |
embryonic structure | 2.88e-07 | 564 |