FFCP PHASE1:Hg19::chr11:1874342..1874372,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4046 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6707 | |||
|TSSclassifier=strong | |||
|UniProt=P33241 | |||
|association_with_transcript=142bp_to_ENST00000311604,NM_002339,uc001lui.2_5end | |||
|cluster_id=chr11:1874342..1874372,+ | |||
|description=CAGE_peak_2_at_LSP1_5end | |||
|id=chr11:1874342..1874372,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.70e-76!172;CL:0000566!4.70e-76!172;CL:0000738!1.62e-75!140;CL:0000988!3.84e-73!182;CL:0002032!1.86e-72!165;CL:0000837!1.86e-72!165;CL:0002087!5.79e-65!119;CL:0002031!1.59e-62!124;CL:0000763!1.85e-41!112;CL:0000049!1.85e-41!112;CL:0000766!5.53e-38!76;CL:0002009!1.72e-35!65;CL:0000557!1.08e-34!71;CL:0002194!6.43e-34!63;CL:0000576!6.43e-34!63;CL:0000040!6.43e-34!63;CL:0000559!6.43e-34!63;CL:0002057!3.08e-33!42;CL:0000839!2.41e-32!70;CL:0000860!1.53e-29!45;CL:0000542!7.58e-27!53;CL:0000051!7.58e-27!53;CL:0000838!3.15e-26!52;CL:0000945!7.26e-15!24;CL:0000826!7.26e-15!24;CL:0000134!3.41e-12!358;CL:0000084!2.89e-11!25;CL:0000827!2.89e-11!25;CL:0002320!4.49e-11!365;CL:0000451!1.22e-10!10;CL:0000791!2.07e-09!18;CL:0000789!2.07e-09!18;CL:0002420!2.07e-09!18;CL:0002419!2.07e-09!18;CL:0000790!2.07e-09!18;CL:0000236!2.80e-09!14;CL:0000990!3.55e-09!8;CL:0002393!2.50e-08!9;CL:0002397!2.50e-08!9;CL:0000219!1.19e-07!390;CL:0000625!8.51e-07!11;CL:0000094!8.93e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.05e-26;33!CL:0002057;4.05e-26;33!CL:0000473;7.53e-26;39!CL:0000234;7.53e-26;39!CL:0000576;1.67e-21;48!CL:0002087;3.10e-19;104!CL:0000766;3.83e-18;69!CL:0000738;1.29e-17;136!CL:0000542;4.34e-17;53!CL:0000945;3.44e-16;24!CL:0000988;4.77e-13;177!CL:0000763;5.29e-12;100!CL:0000451;1.60e-11;10!CL:0000084;1.64e-11;25!CL:0000791;3.56e-10;18!CL:0000789;3.56e-10;18!CL:0002419;3.56e-10;18!CL:0000990;6.44e-10;8!CL:0000236;1.38e-09;13!CL:0000625;2.64e-07;11!CL:0000094;2.74e-07;8!CL:0000219;3.02e-07;193!CL:0000840;5.67e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.02e-85,136;CL:0000037,3.50e-81,168;CL:0000988,2.76e-79,177;CL:0002032,3.42e-77,161;CL:0000837,3.42e-77,161;CL:0002087,4.68e-73,115;CL:0002031,1.61e-68,120;CL:0000766,2.37e-44,72;CL:0000763,3.86e-44,108;CL:0000049,3.86e-44,108;CL:0002009,1.07e-41,61;CL:0000473,3.11e-41,48;CL:0000234,3.11e-41,48;CL:0000557,1.09e-40,67;CL:0002194,6.12e-40,59;CL:0000576,6.12e-40,59;CL:0000040,6.12e-40,59;CL:0000559,6.12e-40,59;CL:0000860,2.43e-36,42;CL:0002057,2.43e-36,42;CL:0000839,3.10e-36,66;CL:0000542,1.48e-28,53;CL:0000051,1.48e-28,53;CL:0000838,7.02e-28,52;CL:0000945,3.67e-16,24;CL:0000826,3.67e-16,24;CL:0000134,1.24e-15,354;CL:0002320,1.90e-14,361;CL:0000084,1.55e-11,25;CL:0000827,1.55e-11,25;CL:0000451,1.60e-11,10;CL:0000219,9.28e-11,386;CL:0000791,3.56e-10,18;CL:0000789,3.56e-10,18;CL:0002420,3.56e-10,18;CL:0002419,3.56e-10,18;CL:0000790,3.56e-10,18;CL:0000236,4.96e-10,14;CL:0000990,6.42e-10,8;CL:0002393,5.46e-09,9;CL:0002397,5.46e-09,9;CL:0000625,2.61e-07,11;CL:0000094,2.75e-07,8;CL:0000840,5.65e-07,5;CL:0001029,5.65e-07,5;CL:0000048,7.22e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;4.02e-26;42!CL:0000051;4.34e-17;53!CL:0000049;4.24e-12;108!CL:0000790;3.56e-10;18 | |||
|ontology_enrichment_disease=DOID:2531!7.54e-07!51;DOID:0060083!7.54e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.30e-42!102;UBERON:0003061!1.30e-42!102;UBERON:0002193!1.25e-37!112;UBERON:0002371!8.81e-30!80;UBERON:0001474!1.10e-25!86;UBERON:0002405!1.64e-22!115;UBERON:0004765!1.51e-19!101;UBERON:0001434!1.51e-19!101;UBERON:0007023!1.28e-16!115;UBERON:0000178!3.25e-10!15;UBERON:0000179!3.25e-10!15;UBERON:0000463!3.25e-10!15;UBERON:0002384!5.65e-10!375;UBERON:0003081!4.78e-09!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.64e-11;15!UBERON:0000179;4.64e-11;15!UBERON:0000463;4.64e-11;15!UBERON:0002390;5.76e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.62e-49,98;UBERON:0003061,1.62e-49,98;UBERON:0002193,4.01e-44,108;UBERON:0002371,3.41e-35,76;UBERON:0002405,5.63e-34,93;UBERON:0001474,1.21e-30,82;UBERON:0004765,1.35e-25,90;UBERON:0001434,3.80e-21,100;UBERON:0003081,1.15e-13,203;UBERON:0002384,2.62e-13,371;UBERON:0000178,4.67e-11,15;UBERON:0000179,4.67e-11,15;UBERON:0000463,4.67e-11,15;UBERON:0007023,2.97e-08,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.0679017574213,0,0,0,0,0,0,0,0,0,183.468587200831,164.447480668241,161.671944818297,177.013924582007,126.279871973983,152.803513712967,0,0,0,93.5029111004241,83.4533394701164,30.2408452514893,135.174879681778,140.782202124039,148.652446440358,6.94137970143765,22.9964502873475,7.98484259665978,207.337888499659,191.205227506538,274.605157264608,205.699697661531,197.771754138498,226.705063495216,229.003144288432,188.02195859236,280.704406877751,218.22401590628,183.96313482139,285.749886714061,231.914562316489,200.040207992401,255.510601814061,252.213127313624,262.519944148245,333.0946425413,215.392899021926,167.549472402171,231.866264289786,256.25475770904,230.358401224603,264.699455823119,178.386552332288,171.046397241826,296.679961867189,228.23561249278,244.536350295743,256.334533827116,293.222337400975,288.929243652494,308.617526188329,138.950516728214,172.553249874891,146.903186241131,230.005284199188,293.203182191459,349.801854459274,165.436469793643,158.380197266018,160.11166569544,139.540782779248,170.168294490305,153.458901467847,159.972859213937,140.245901916699,82.53588052087,132.715604797832,128.061531421952,9.25199300053181,40.3566165346706,51.0965124463649,32.0636925285548,35.3709686474248,40.2978938039038,35.6107235182144,22.1627141310841,24.6192858982061,27.2757419771076,111.633277798944,68.6431764416371,87.5058883605303,88.8236673149251,32.4071038905958,38.7576855728437,150.460682712364,159.453960262434,165.18775886898,36.3302079747048,29.4294910898684,37.6327885697916,114.442436124542,46.3696797258325,46.389705140155,58.1945291644857,67.5358678367085,75.5256806473445,85.5406840003537,78.4496370395196,83.7032436949896,106.191117569494,82.8720382154059,97.7142316336045,63.1029106293413,87.1855038254234,54.1643270521668,0,0,0,0,0,0,0,0,0,0,0.966182642624386,9.03755620934217,0,0.741568885568859,441.709002764024,462.314452529555,366.166223268955,253.515533636579,258.541699672618,176.813770632873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,254.336205651602,252.057171696411,0,0,0,0,0,3.54668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.269662616320329,0,0,0,0,0,0,2.53510069643662,1.96565443335525,0.590789906681404,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,116.706860885426,488.600905610728,214.772029507212,0,0,0,0,0,0,0,0,2.69526550203004,1.29707958075265,2.39860623510122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,237.166372250321,76.3430778976832,343.659321357342,0,0,0,0,0,0,10.423918391398,71.3251351930977,69.6477066796241,80.8561128562415,0,0,0,0,0,165.530552292327,143.597500417932,98.2164766843404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,99.4554205651088,125.545664876435,101.177724797665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,3.40035338437484,0,0,0,0,0,0,0,0,0,0,0,2.47157219506693,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9420574144888,0,0,0,0,0,1.05553817648832,0,0,0,0.0962221127255121,4.02181365321472,0,2.44773882019626,0,3.36942951335251,0,0,106.056550329523,84.1100927856613,99.1186105683043,95.0544784076578,107.776915548583,103.107256479642,98.825753014575,111.830649857492,0,0,0,138.051759118409,1.298422916788,0,0.159426272728822,108.371598688019,102.646878390949,47.2032089474259,0.324621940274555,9.26630687774414,51.3528027824683,17.5481483265786,10.0253790836027,21.6693475586052,28.1029131431474,8.0719882876419,109.442483086414,59.0829192979915,0.307240764308458,0.447352215784832,0,42.7899928930468,0,0,0,0.99921590399346,4.22961015263549,0,44.3919783193839,0,132.840514058754,0,0.47748896947538,4.75143489332222,0,0,2.2507106625682,0,2.96646973608167,0,4.98119970627674,85.3717298991246,0,0,90.9596712357303,0,0,0,14.8355987365793,4.73488347057281,136.505362637756,0,0,1.57705766875147,0,0,0,0,0,0,0,0,0,0,0,1.5677537021303,0,0.221158519862449,1.18219047581419,0.87754158861589,0,0,4.61701551022782,0,0,0,0,4.46601623624687,1.64875668123352,6.39641731222362,59.2721129535272,0.156980256395025,0,0,0,0,0,0,0,0,0,0,6.96683351754953,9.11112914384393,13.4426631885398,142.92318402406,296.306325593714,288.413424534068,1.95463285643963,3.21031058919516,0,150.890110681356,0,0,3.94584402849391,12.0990716048664,0.61214552326098,12.1318232886697,0.60129367765797,0,0,0,0,0,0,0,0,0.685946781900644,0,5.94070672022902,0,0,0,0,6.30428607174726,0,3.38971111170799,0,0,0.253243183823515,0,0,11.526461715925,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,2.87501295673185,166.070564487064,0.429765441419957,623.568804350534,3.0721064139948,1.3749625440701,0,0.998395002494955,0.429226048136571,0.89268582976749,1.74677028465488,0,0,0,0,0,0,69.8554989542722,0,1.63444087333891,0,0,0,283.242129463339,177.974449548328,0.607495566580247,0,1.97014268247995,1.78345599658994,0,0,0,5.00286728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| |||
|short_description=p2@LSP1 | |||
}} |
Latest revision as of 03:48, 17 September 2015
Short description: | p2@LSP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LSP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 142bp_to_ENST00000311604, NM_002339, uc001lui.2_5end |
EntrezGene: | LSP1 |
HGNC: | 6707 |
UniProt: | P33241 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.62e-49 | 98 |
blood island | 1.62e-49 | 98 |
hemolymphoid system | 4.01e-44 | 108 |
bone marrow | 3.41e-35 | 76 |
immune system | 5.63e-34 | 93 |
bone element | 1.21e-30 | 82 |
skeletal element | 1.35e-25 | 90 |
skeletal system | 3.80e-21 | 100 |
lateral plate mesoderm | 1.15e-13 | 203 |
connective tissue | 2.62e-13 | 371 |
blood | 4.67e-11 | 15 |
haemolymphatic fluid | 4.67e-11 | 15 |
organism substance | 4.67e-11 | 15 |
adult organism | 2.97e-08 | 114 |