FFCP PHASE1:Hg19::chr12:68726052..68726117,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56890 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29917 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TC05,E7EPQ3,F5H804 | |||
|association_with_transcript=0bp_to_ENST00000303145,ENST00000393543,ENST00000411698,ENST00000540418_5end | |||
|cluster_id=chr12:68726052..68726117,- | |||
|coexpression_cluster_id=C153 | |||
|description=CAGE_peak_1_at_MDM1_5end | |||
|id=chr12:68726052..68726117,- | |||
|ontology_enrichment_celltype=CL:0000037!1.84e-13!172;CL:0000566!1.84e-13!172;CL:0002032!3.06e-12!165;CL:0000837!3.06e-12!165;CL:0000988!5.57e-12!182;CL:0000542!3.10e-10!53;CL:0000051!3.10e-10!53;CL:0000838!6.12e-10!52;CL:0000738!9.10e-08!140 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.42e-14,168;CL:0000988,4.44e-13,177;CL:0002032,6.06e-13,161;CL:0000837,6.06e-13,161;CL:0000542,3.09e-10,53;CL:0000051,3.09e-10,53;CL:0000838,6.10e-10,52;CL:0000738,2.50e-08,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!1.16e-09!51;DOID:0060083!1.16e-09!51;DOID:1240!2.42e-08!39;DOID:8692!9.65e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;9.62e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.16e-09,51;DOID:0060083,1.16e-09,51;DOID:1240,2.42e-08,39;DOID:8692,9.63e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.23e-22!115;UBERON:0001049!1.65e-11!57;UBERON:0005068!1.65e-11!57;UBERON:0006241!1.65e-11!57;UBERON:0007135!1.65e-11!57;UBERON:0000073!2.41e-10!94;UBERON:0001016!2.41e-10!94;UBERON:0001017!8.79e-10!82;UBERON:0002780!9.88e-10!41;UBERON:0001890!9.88e-10!41;UBERON:0006240!9.88e-10!41;UBERON:0003080!1.60e-09!42;UBERON:0005743!2.35e-09!86;UBERON:0000955!2.76e-09!69;UBERON:0006238!2.76e-09!69;UBERON:0002616!7.84e-09!59;UBERON:0000178!1.84e-07!15;UBERON:0000179!1.84e-07!15;UBERON:0000463!1.84e-07!15;UBERON:0002020!2.55e-07!34;UBERON:0003528!2.55e-07!34;UBERON:0001893!6.96e-07!34;UBERON:0002791!7.81e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.82e-07;15!UBERON:0000179;1.82e-07;15!UBERON:0000463;1.82e-07;15!UBERON:0002780;1.92e-07;41!UBERON:0001890;1.92e-07;41!UBERON:0000073;5.00e-07;53!UBERON:0002616;5.00e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.98e-22,114;UBERON:0001049,1.06e-11,56;UBERON:0005068,1.06e-11,56;UBERON:0006241,1.06e-11,56;UBERON:0007135,1.06e-11,56;UBERON:0001016,6.93e-11,89;UBERON:0000073,1.49e-10,53;UBERON:0002616,1.49e-10,53;UBERON:0001017,6.79e-10,81;UBERON:0002780,9.86e-10,41;UBERON:0001890,9.86e-10,41;UBERON:0003080,9.86e-10,41;UBERON:0006240,9.86e-10,41;UBERON:0000955,2.07e-09,68;UBERON:0006238,2.07e-09,68;UBERON:0000178,1.84e-07,15;UBERON:0000179,1.84e-07,15;UBERON:0000463,1.84e-07,15;UBERON:0003528,2.54e-07,34;UBERON:0002020,2.54e-07,34;UBERON:0001893,6.95e-07,34 | |||
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| |||
|short_description=p1@MDM1 | |||
}} |
Latest revision as of 02:31, 20 September 2015
Short description: | p1@MDM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MDM1_5end |
Coexpression cluster: | C153_rhabdomyosarcoma_liposarcoma_pancreatic_somatostatinoma_Reticulocytes_lymphoma_testicular |
Association with transcript: | 0bp_to_ENST00000303145, ENST00000393543, ENST00000411698, ENST00000540418_5end |
EntrezGene: | MDM1 |
HGNC: | 29917 |
UniProt: | Q8TC05E7EPQ3F5H804 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.42e-14 | 168 |
hematopoietic cell | 4.44e-13 | 177 |
hematopoietic oligopotent progenitor cell | 6.06e-13 | 161 |
hematopoietic multipotent progenitor cell | 6.06e-13 | 161 |
lymphocyte | 3.09e-10 | 53 |
common lymphoid progenitor | 3.09e-10 | 53 |
lymphoid lineage restricted progenitor cell | 6.10e-10 | 52 |
leukocyte | 2.50e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.98e-22 | 114 |
neural tube | 1.06e-11 | 56 |
neural rod | 1.06e-11 | 56 |
future spinal cord | 1.06e-11 | 56 |
neural keel | 1.06e-11 | 56 |
nervous system | 6.93e-11 | 89 |
regional part of nervous system | 1.49e-10 | 53 |
regional part of brain | 1.49e-10 | 53 |
central nervous system | 6.79e-10 | 81 |
regional part of forebrain | 9.86e-10 | 41 |
forebrain | 9.86e-10 | 41 |
anterior neural tube | 9.86e-10 | 41 |
future forebrain | 9.86e-10 | 41 |
brain | 2.07e-09 | 68 |
future brain | 2.07e-09 | 68 |
blood | 1.84e-07 | 15 |
haemolymphatic fluid | 1.84e-07 | 15 |
organism substance | 1.84e-07 | 15 |
brain grey matter | 2.54e-07 | 34 |
gray matter | 2.54e-07 | 34 |
telencephalon | 6.95e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.16e-09 | 51 |
immune system cancer | 1.16e-09 | 51 |
leukemia | 2.42e-08 | 39 |
myeloid leukemia | 9.63e-07 | 31 |