FFCP PHASE1:Hg19::chr19:1848701..1848737,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57455 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24616 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N1G1,Q05DB0 | |||
|association_with_transcript=-249bp_to_ENST00000170168,NM_020695,uc002lua.3,uc010dsr.1_5end | |||
|cluster_id=chr19:1848701..1848737,- | |||
|description=CAGE_peak_2_at_REXO1_5end | |||
|id=chr19:1848701..1848737,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!3.89e-10!41;UBERON:0001890!3.89e-10!41;UBERON:0006240!3.89e-10!41;UBERON:0001869!8.60e-10!32;UBERON:0001893!1.44e-09!34;UBERON:0002020!1.71e-09!34;UBERON:0003528!1.71e-09!34;UBERON:0003080!2.10e-09!42;UBERON:0002791!5.21e-09!33;UBERON:0001049!1.33e-08!57;UBERON:0005068!1.33e-08!57;UBERON:0006241!1.33e-08!57;UBERON:0007135!1.33e-08!57;UBERON:0001950!1.10e-07!20;UBERON:0003056!1.60e-07!61;UBERON:0005743!2.62e-07!86;UBERON:0002619!3.18e-07!22;UBERON:0001017!6.66e-07!82;UBERON:0000956!8.46e-07!25;UBERON:0000203!8.46e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.29e-15;22!UBERON:0001950;3.63e-15;20!UBERON:0001869;1.88e-14;32!UBERON:0002791;2.43e-13;32!UBERON:0001893;2.52e-13;34!UBERON:0000956;7.67e-13;25!UBERON:0000203;7.67e-13;25!UBERON:0003528;5.10e-12;34!UBERON:0002020;5.10e-12;34!UBERON:0002780;2.18e-09;41!UBERON:0001890;2.18e-09;41!UBERON:0001871;3.16e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.50e-17,32;UBERON:0001893,3.94e-16,34;UBERON:0002619,4.50e-16,22;UBERON:0001950,4.96e-16,20;UBERON:0002791,1.28e-15,32;UBERON:0003528,2.45e-14,34;UBERON:0002020,2.45e-14,34;UBERON:0000956,1.38e-13,25;UBERON:0000203,1.38e-13,25;UBERON:0002780,1.40e-13,41;UBERON:0001890,1.40e-13,41;UBERON:0003080,1.40e-13,41;UBERON:0006240,1.40e-13,41;UBERON:0000073,7.22e-10,53;UBERON:0002616,7.22e-10,53;UBERON:0001049,7.50e-10,56;UBERON:0005068,7.50e-10,56;UBERON:0006241,7.50e-10,56;UBERON:0007135,7.50e-10,56;UBERON:0003056,1.32e-09,61;UBERON:0000955,2.87e-09,68;UBERON:0006238,2.87e-09,68;UBERON:0001017,1.25e-08,81;UBERON:0001871,6.46e-08,6;UBERON:0002346,3.33e-07,86;UBERON:0001016,5.39e-07,89;UBERON:0000200,6.00e-07,6 | |||
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| |||
|short_description=p2@REXO1 | |||
}} |
Latest revision as of 15:47, 16 September 2015
Short description: | p2@REXO1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_REXO1_5end |
Coexpression cluster: | NA |
Association with transcript: | -249bp_to_ENST00000170168, NM_020695, uc002lua.3, uc010dsr.1_5end |
EntrezGene: | REXO1 |
HGNC: | 24616 |
UniProt: | Q8N1G1Q05DB0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 1.50e-17 | 32 |
telencephalon | 3.94e-16 | 34 |
regional part of cerebral cortex | 4.50e-16 | 22 |
neocortex | 4.96e-16 | 20 |
regional part of telencephalon | 1.28e-15 | 32 |
brain grey matter | 2.45e-14 | 34 |
gray matter | 2.45e-14 | 34 |
cerebral cortex | 1.38e-13 | 25 |
pallium | 1.38e-13 | 25 |
regional part of forebrain | 1.40e-13 | 41 |
forebrain | 1.40e-13 | 41 |
anterior neural tube | 1.40e-13 | 41 |
future forebrain | 1.40e-13 | 41 |
regional part of nervous system | 7.22e-10 | 53 |
regional part of brain | 7.22e-10 | 53 |
neural tube | 7.50e-10 | 56 |
neural rod | 7.50e-10 | 56 |
future spinal cord | 7.50e-10 | 56 |
neural keel | 7.50e-10 | 56 |
pre-chordal neural plate | 1.32e-09 | 61 |
brain | 2.87e-09 | 68 |
future brain | 2.87e-09 | 68 |
central nervous system | 1.25e-08 | 81 |
temporal lobe | 6.46e-08 | 6 |
neurectoderm | 3.33e-07 | 86 |
nervous system | 5.39e-07 | 89 |
gyrus | 6.00e-07 | 6 |