FFCP PHASE1:Hg19::chr19:572543..572579,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=682 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1116 | |||
|TSSclassifier=strong | |||
|UniProt=P35613,Q54A51 | |||
|association_with_transcript=6bp_to_ENST00000333511,ENST00000353555,NM_001728,NM_198589,uc002loz.2,uc002lpa.2,uc002lpb.2,uc010drr.2_5end | |||
|cluster_id=chr19:572543..572579,+ | |||
|coexpression_cluster_id=C345 | |||
|description=CAGE_peak_2_at_BSG_5end | |||
|id=chr19:572543..572579,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.14e-21!180;CL:0000222!1.97e-15!119;CL:0000183!4.00e-12!59;CL:0002371!4.82e-12!591;CL:0000144!1.90e-11!625;CL:0000680!2.34e-10!57;CL:0000056!2.34e-10!57;CL:0000355!2.34e-10!57;CL:0000187!3.97e-10!54;CL:0000393!5.32e-10!60;CL:0000211!5.32e-10!60;CL:0002321!1.48e-09!248;CL:0000220!1.65e-09!246;CL:0000192!6.28e-09!42;CL:0000514!6.28e-09!42;CL:1000449!1.09e-07!16;CL:1000497!1.30e-07!18;CL:0002518!1.30e-07!18;CL:0000057!1.41e-07!75;CL:0000325!4.26e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.19e-07;15!CL:1000497;1.46e-07;17!CL:0002518;1.46e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.11e-15,121;CL:0000680,1.75e-10,58;CL:0000056,1.75e-10,58;CL:0000355,1.75e-10,58;CL:0000187,2.96e-10,55;CL:0000393,3.95e-10,61;CL:0000211,3.95e-10,61;CL:0002321,8.98e-10,250;CL:0000192,4.75e-09,43;CL:0000514,4.75e-09,43;CL:0000057,8.70e-08,76;CL:1000449,1.20e-07,15;CL:1000497,1.51e-07,17;CL:0002518,1.51e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!1.75e-11!113;UBERON:0002049!2.21e-11!79;UBERON:0007798!2.21e-11!79;UBERON:0004535!2.59e-11!110;UBERON:0004872!9.26e-11!84;UBERON:0003914!4.70e-10!118;UBERON:0000055!4.60e-09!69;UBERON:0005256!8.45e-09!143;UBERON:0000119!1.27e-08!312;UBERON:0004290!1.53e-08!70;UBERON:0000914!1.64e-08!83;UBERON:0002329!1.64e-08!83;UBERON:0003077!1.64e-08!83;UBERON:0003059!1.64e-08!83;UBERON:0007282!1.64e-08!83;UBERON:0009618!1.64e-08!83;UBERON:0007285!1.64e-08!83;UBERON:0001134!1.84e-08!61;UBERON:0002036!1.84e-08!61;UBERON:0003082!1.84e-08!61;UBERON:0000486!2.23e-08!82;UBERON:0000483!2.87e-08!309;UBERON:0001981!3.16e-08!60;UBERON:0007500!3.16e-08!60;UBERON:0004537!3.16e-08!60;UBERON:0006965!3.16e-08!60;UBERON:0002385!3.41e-08!63;UBERON:0001015!3.41e-08!63;UBERON:0000383!3.41e-08!63;UBERON:0004876!8.45e-08!20;UBERON:0006555!8.49e-08!17;UBERON:0005103!8.49e-08!17;UBERON:0000083!8.49e-08!17;UBERON:0009201!8.49e-08!17;UBERON:0004819!8.49e-08!17;UBERON:0006553!8.49e-08!17;UBERON:0003074!8.49e-08!17;UBERON:0003060!8.49e-08!17;UBERON:0004211!1.09e-07!16;UBERON:0001285!1.09e-07!16;UBERON:0007684!1.09e-07!16;UBERON:0003220!1.09e-07!16;UBERON:0004208!1.09e-07!16;UBERON:0000080!1.15e-07!18;UBERON:0002120!1.15e-07!18;UBERON:0004875!1.15e-07!18;UBERON:0005721!1.15e-07!18;UBERON:0005754!1.15e-07!18;UBERON:0007297!1.15e-07!18;UBERON:0000475!2.70e-07!365;UBERON:0000019!4.08e-07!19;UBERON:0000047!4.08e-07!19;UBERON:0004088!4.08e-07!19;UBERON:0003072!4.08e-07!19;UBERON:0003071!4.08e-07!19;UBERON:0004128!4.08e-07!19;UBERON:0001456!4.31e-07!21;UBERON:0001637!4.88e-07!42;UBERON:0003509!4.88e-07!42;UBERON:0004572!4.88e-07!42;UBERON:0000970!7.08e-07!20;UBERON:0000353!7.33e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.19e-07;15!UBERON:0004819;1.19e-07;15!UBERON:0001285;1.19e-07;15!UBERON:0007684;1.19e-07;15!UBERON:0003914;3.29e-07;74!UBERON:0000019;4.10e-07;19!UBERON:0000047;4.10e-07;19!UBERON:0004088;4.10e-07;19!UBERON:0010230;4.10e-07;19!UBERON:0001456;4.47e-07;21!UBERON:0000970;7.15e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001009,2.92e-11,112;UBERON:0002049,3.80e-11,78;UBERON:0007798,3.80e-11,78;UBERON:0004535,4.33e-11,109;UBERON:0007503,8.13e-11,78;UBERON:0004872,1.57e-10,83;UBERON:0003914,6.35e-10,117;UBERON:0000926,1.91e-09,315;UBERON:0004120,1.91e-09,315;UBERON:0006603,1.91e-09,315;UBERON:0007524,6.00e-09,73;UBERON:0003104,7.13e-09,160;UBERON:0009142,7.13e-09,160;UBERON:0000055,7.72e-09,68;UBERON:0000119,1.04e-08,309;UBERON:0003077,1.06e-08,72;UBERON:0007285,1.06e-08,72;UBERON:0002329,1.14e-08,71;UBERON:0003059,1.14e-08,71;UBERON:0007282,1.14e-08,71;UBERON:0004290,1.14e-08,71;UBERON:0009618,1.14e-08,71;UBERON:0001134,1.36e-08,62;UBERON:0002036,1.36e-08,62;UBERON:0003082,1.36e-08,62;UBERON:0000486,1.66e-08,83;UBERON:0000483,2.35e-08,306;UBERON:0002385,2.54e-08,64;UBERON:0001015,2.54e-08,64;UBERON:0000383,2.54e-08,64;UBERON:0007500,5.28e-08,59;UBERON:0001981,5.28e-08,59;UBERON:0004537,5.28e-08,59;UBERON:0006965,5.28e-08,59;UBERON:0006555,9.51e-08,16;UBERON:0004819,9.51e-08,16;UBERON:0004211,1.20e-07,15;UBERON:0009773,1.20e-07,15;UBERON:0001231,1.20e-07,15;UBERON:0001285,1.20e-07,15;UBERON:0007684,1.20e-07,15;UBERON:0004208,1.20e-07,15;UBERON:0001637,4.88e-07,42;UBERON:0003509,4.88e-07,42;UBERON:0004572,4.88e-07,42 | |||
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| |||
|short_description=p2@BSG | |||
}} |
Latest revision as of 04:50, 20 September 2015
Short description: | p2@BSG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BSG_5end |
Coexpression cluster: | C345_Mesenchymal_Fibroblast_Alveolar_Renal_Pericytes_Hepatic_Smooth |
Association with transcript: | 6bp_to_ENST00000333511, ENST00000353555, NM_001728, NM_198589, uc002loz.2, uc002lpa.2, uc002lpb.2, uc010drr.2_5end |
EntrezGene: | BSG |
HGNC: | 1116 |
UniProt: | P35613Q54A51 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.11e-15 | 121 |
muscle precursor cell | 1.75e-10 | 58 |
myoblast | 1.75e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.75e-10 | 58 |
muscle cell | 2.96e-10 | 55 |
electrically responsive cell | 3.95e-10 | 61 |
electrically active cell | 3.95e-10 | 61 |
embryonic cell | 8.98e-10 | 250 |
smooth muscle cell | 4.75e-09 | 43 |
smooth muscle myoblast | 4.75e-09 | 43 |
fibroblast | 8.70e-08 | 76 |
epithelial cell of nephron | 1.20e-07 | 15 |
kidney cell | 1.51e-07 | 17 |
kidney epithelial cell | 1.51e-07 | 17 |