FFCP PHASE1:Hg19::chr9:119741711..119741743,-: Difference between revisions
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|id=chr9:119741711..119741743,-
|short_description=p@chr9:119741711..119741743,-
|description=CAGE_peak_at_chr9:119741711..119741743,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:119741711..119741743,- | |||
|coexpression_cluster_id=C276 | |||
|description=CAGE_peak_at_chr9:119741711..119741743,- | |||
|id=chr9:119741711..119741743,- | |||
|ontology_enrichment_celltype=CL:1000497!6.46e-54!18;CL:0002518!6.46e-54!18;CL:1000507!6.19e-46!12;CL:1000494!6.19e-46!12;CL:1000449!6.59e-42!16;CL:0002681!2.40e-25!13;CL:0002584!2.40e-25!13;CL:0000239!1.55e-10!3;CL:1000615!1.55e-10!3;CL:0002306!1.55e-10!3;CL:0000650!3.93e-10!3;CL:1000618!3.93e-10!3;CL:1001318!3.93e-10!3;CL:0002173!3.93e-10!3;CL:1000500!3.93e-10!3;CL:1000612!2.51e-09!7;CL:1000746!2.51e-09!7;CL:0000313!2.33e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:1000497;3.69e-51;17!CL:0002518;3.69e-51;17!CL:1000507;1.60e-44;10!CL:1000494;1.60e-44;10!CL:1000449;8.62e-30;15!CL:0000239;7.92e-25;3!CL:1000615;7.92e-25;3!CL:0002306;7.92e-25;3!CL:0002681;6.35e-07;12!CL:0002584;6.35e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,3.69e-51,17;CL:0002518,3.69e-51,17;CL:1000507,1.67e-44,10;CL:1000494,1.67e-44,10;CL:1000449,8.88e-30,15;CL:0000239,7.93e-25,3;CL:1000615,7.93e-25,3;CL:0002306,7.93e-25,3;CL:0002681,6.35e-07,12;CL:0002584,6.35e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.90e-29;10!UBERON:0007687;1.90e-29;10!UBERON:0003104;4.41e-10;31 | |||
|ontology_enrichment_disease=DOID:2152!2.33e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002113;7.08e-60;24!UBERON:0011143;7.08e-60;24!UBERON:0000489;1.64e-49;29!UBERON:0006554;7.48e-48;30!UBERON:0001008;7.48e-48;30!UBERON:0004211;1.60e-44;10!UBERON:0009773;1.60e-44;10!UBERON:0001231;1.60e-44;10!UBERON:0004810;1.60e-44;10!UBERON:0006555;8.62e-30;15!UBERON:0004819;8.62e-30;15!UBERON:0001285;8.62e-30;15!UBERON:0007684;8.62e-30;15!UBERON:0006853;7.92e-25;3!UBERON:0007685;7.92e-25;3!UBERON:0004134;7.92e-25;3!UBERON:0005172;2.77e-18;52!UBERON:0005173;2.77e-18;52!UBERON:0002417;4.19e-13;58!UBERON:0000916;4.19e-13;58!UBERON:0003103;1.44e-10;61!UBERON:0005177;4.27e-08;99!UBERON:0001225;6.35e-07;12!UBERON:0008987;6.35e-07;12 | |||
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|short_description=p@chr9:119741711..119741743,- | |||
}} | }} |
Latest revision as of 22:14, 31 July 2015
Short description: | p@chr9:119741711..119741743, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:119741711..119741743, - |
Coexpression cluster: | C276_mesothelioma_kidney_renal_small_clear_cerebellum_Renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 3.69e-51 | 17 |
kidney epithelial cell | 3.69e-51 | 17 |
kidney tubule cell | 1.67e-44 | 10 |
nephron tubule epithelial cell | 1.67e-44 | 10 |
epithelial cell of nephron | 8.88e-30 | 15 |
brush border epithelial cell | 7.93e-25 | 3 |
kidney cortex tubule cell | 7.93e-25 | 3 |
epithelial cell of proximal tubule | 7.93e-25 | 3 |
kidney cortical cell | 6.35e-07 | 12 |
renal cortical epithelial cell | 6.35e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
kidney | 3.07e-55 | 26 |
kidney mesenchyme | 3.07e-55 | 26 |
upper urinary tract | 3.07e-55 | 26 |
kidney rudiment | 3.07e-55 | 26 |
kidney field | 3.07e-55 | 26 |
cavitated compound organ | 2.74e-46 | 31 |
nephron tubule epithelium | 1.67e-44 | 10 |
urinary system structure | 2.03e-30 | 47 |
nephron epithelium | 8.88e-30 | 15 |
renal tubule | 8.88e-30 | 15 |
nephron tubule | 8.88e-30 | 15 |
nephron | 8.88e-30 | 15 |
uriniferous tubule | 8.88e-30 | 15 |
nephrogenic mesenchyme | 8.88e-30 | 15 |
renal system | 8.88e-30 | 48 |
excretory tube | 6.19e-28 | 16 |
kidney epithelium | 6.19e-28 | 16 |
abdomen element | 2.00e-26 | 54 |
abdominal segment element | 2.00e-26 | 54 |
renal cortex tubule | 7.93e-25 | 3 |
region of nephron tubule | 7.93e-25 | 3 |
proximal tubule | 7.93e-25 | 3 |
abdominal segment of trunk | 9.66e-24 | 60 |
abdomen | 9.66e-24 | 60 |
compound organ | 6.77e-21 | 68 |
trunk region element | 6.70e-14 | 101 |
subdivision of trunk | 1.77e-12 | 112 |
mesenchyme | 1.53e-08 | 160 |
entire embryonic mesenchyme | 1.53e-08 | 160 |
cortex of kidney | 6.35e-07 | 12 |
renal parenchyma | 6.35e-07 | 12 |