FFCP PHASE1:Hg19::chr20:60878005..60878086,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11047 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15759 | |||
|TSSclassifier=strong | |||
|UniProt=Q16186,E9PEC0 | |||
|association_with_transcript=0bp_to_ENST00000253003,ENST00000370744,NM_007002,NM_175573,uc002ycn.2,uc002yco.2,uc011aai.1_5end | |||
|cluster_id=chr20:60878005..60878086,+ | |||
|description=CAGE_peak_1_at_ADRM1_5end | |||
|id=chr20:60878005..60878086,+ | |||
|ontology_enrichment_celltype=CL:0000548!5.90e-44!679;CL:0000004!5.90e-44!679;CL:0000255!5.90e-44!679;CL:0000012!3.52e-43!682;CL:0000066!2.97e-35!254;CL:0002321!5.23e-29!248;CL:0000220!1.37e-28!246;CL:0000144!1.25e-26!625;CL:0000003!1.09e-24!722;CL:0000063!3.68e-24!578;CL:0002371!1.04e-22!591;CL:0000222!6.19e-17!119;CL:0000076!1.18e-13!62;CL:0000213!4.48e-11!57;CL:0000215!4.48e-11!57;CL:0000359!2.00e-10!32;CL:0000192!9.73e-10!42;CL:0000514!9.73e-10!42;CL:0000115!2.86e-09!35;CL:0000223!5.48e-09!59;CL:0002078!5.94e-09!44;CL:0000071!2.21e-08!18;CL:0002546!2.21e-08!18;CL:0002139!2.59e-08!24;CL:0002076!2.60e-08!43;CL:0000183!2.97e-08!59;CL:0000393!8.87e-07!60;CL:0000211!8.87e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.96e-10;32!CL:0000115;2.07e-08;36!CL:0000071;2.20e-08;18!CL:0002139;2.60e-08;24!CL:1000449;3.48e-07;15!CL:0000213;4.30e-07;58!CL:0000215;4.30e-07;58!CL:0000076;4.64e-07;63!CL:0000192;5.60e-07;43!CL:0002076;9.03e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.21e-35,253;CL:0002321,4.45e-29,250;CL:0000222,6.40e-17,121;CL:0000076,1.89e-13,63;CL:0000213,1.90e-11,58;CL:0000215,1.90e-11,58;CL:0000359,2.00e-10,32;CL:0000115,1.17e-09,36;CL:0002078,2.55e-09,45;CL:0000192,3.04e-09,43;CL:0000514,3.04e-09,43;CL:0000223,3.94e-09,58;CL:0002076,1.72e-08,42;CL:0000071,2.21e-08,18;CL:0002546,2.21e-08,18;CL:0002139,2.59e-08,24;CL:1000449,3.42e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002546;2.20e-08;18!CL:0000514;5.60e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.59e-14!118;UBERON:0000055!9.84e-14!69;UBERON:0002049!1.04e-13!79;UBERON:0007798!1.04e-13!79;UBERON:0001637!7.23e-13!42;UBERON:0003509!7.23e-13!42;UBERON:0004572!7.23e-13!42;UBERON:0000490!8.30e-13!138;UBERON:0001981!8.73e-13!60;UBERON:0007500!8.73e-13!60;UBERON:0004537!8.73e-13!60;UBERON:0006965!8.73e-13!60;UBERON:0000926!5.70e-12!448;UBERON:0004120!5.70e-12!448;UBERON:0006603!5.70e-12!448;UBERON:0004872!7.22e-11!84;UBERON:0002100!1.40e-09!216;UBERON:0003104!6.10e-09!238;UBERON:0009142!6.10e-09!238;UBERON:0005256!9.02e-09!143;UBERON:0004573!1.16e-08!33;UBERON:0004571!1.16e-08!33;UBERON:0001986!2.21e-08!18;UBERON:0004638!2.21e-08!18;UBERON:0004852!2.21e-08!18;UBERON:0000487!6.27e-08!22;UBERON:0003081!6.93e-08!216;UBERON:0000486!1.65e-07!82;UBERON:0001009!4.87e-07!113;UBERON:0006914!6.05e-07!25;UBERON:0004535!7.32e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;1.29e-09;74!UBERON:0001637;2.51e-09;42!UBERON:0003509;2.51e-09;42!UBERON:0004572;2.51e-09;42!UBERON:0007500;2.57e-09;56!UBERON:0001981;2.57e-09;56!UBERON:0004537;2.57e-09;56!UBERON:0000490;1.58e-08;33!UBERON:0004638;2.20e-08;18!UBERON:0001986;2.20e-08;18!UBERON:0004852;2.20e-08;18!UBERON:0000055;5.15e-08;65!UBERON:0000487;5.88e-08;22!UBERON:0004573;7.40e-08;33!UBERON:0004571;7.40e-08;33!UBERON:0000353;1.52e-07;15!UBERON:0006555;3.48e-07;15!UBERON:0004819;3.48e-07;15!UBERON:0001285;3.48e-07;15!UBERON:0007684;3.48e-07;15!UBERON:0006914;5.76e-07;25!UBERON:0002049;6.36e-07;75!UBERON:0007798;6.36e-07;75!UBERON:0000025;7.30e-07;93 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.16e-14,117;UBERON:0000055,3.36e-14,68;UBERON:0002049,3.92e-14,78;UBERON:0007798,3.92e-14,78;UBERON:0007500,2.84e-13,59;UBERON:0001981,2.84e-13,59;UBERON:0004537,2.84e-13,59;UBERON:0006965,2.84e-13,59;UBERON:0001637,7.23e-13,42;UBERON:0003509,7.23e-13,42;UBERON:0004572,7.23e-13,42;UBERON:0000490,1.73e-12,148;UBERON:0002100,1.30e-11,199;UBERON:0004872,3.28e-11,83;UBERON:0004573,1.16e-08,33;UBERON:0004571,1.16e-08,33;UBERON:0004638,2.21e-08,18;UBERON:0001986,2.21e-08,18;UBERON:0004852,2.21e-08,18;UBERON:0007503,3.58e-08,78;UBERON:0005256,4.34e-08,122;UBERON:0000487,6.27e-08,22;UBERON:0000353,1.49e-07,15;UBERON:0001009,3.02e-07,112;UBERON:0000486,3.04e-07,83;UBERON:0004211,3.42e-07,15;UBERON:0009773,3.42e-07,15;UBERON:0001231,3.42e-07,15;UBERON:0001285,3.42e-07,15;UBERON:0007684,3.42e-07,15;UBERON:0004208,3.42e-07,15;UBERON:0004535,4.54e-07,109;UBERON:0000926,5.79e-07,315;UBERON:0004120,5.79e-07,315;UBERON:0006603,5.79e-07,315;UBERON:0006914,6.05e-07,25 | |||
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| |||
|short_description=p1@ADRM1 | |||
}} |
Latest revision as of 10:18, 17 September 2015
Short description: | p1@ADRM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADRM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000253003, ENST00000370744, NM_007002, NM_175573, uc002ycn.2, uc002yco.2, uc011aai.1_5end |
EntrezGene: | ADRM1 |
HGNC: | 15759 |
UniProt: | Q16186E9PEC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.21e-35 | 253 |
embryonic cell | 4.45e-29 | 250 |
mesodermal cell | 6.40e-17 | 121 |
squamous epithelial cell | 1.89e-13 | 63 |
lining cell | 1.90e-11 | 58 |
barrier cell | 1.90e-11 | 58 |
vascular associated smooth muscle cell | 2.00e-10 | 32 |
endothelial cell | 1.17e-09 | 36 |
meso-epithelial cell | 2.55e-09 | 45 |
smooth muscle cell | 3.04e-09 | 43 |
smooth muscle myoblast | 3.04e-09 | 43 |
endodermal cell | 3.94e-09 | 58 |
endo-epithelial cell | 1.72e-08 | 42 |
blood vessel endothelial cell | 2.21e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.21e-08 | 18 |
endothelial cell of vascular tree | 2.59e-08 | 24 |
epithelial cell of nephron | 3.42e-07 | 15 |