FFCP PHASE1:Hg19::chr2:231808553..231808564,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:231808553..231808564,+ | |||
|coexpression_cluster_id=C730 | |||
|description=CAGE_peak_at_chr2:231808553..231808564,+ | |||
|id=chr2:231808553..231808564,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.14e-21!140;CL:0000988!1.53e-19!182;CL:0000453!4.79e-18!5;CL:0000037!4.04e-16!172;CL:0000566!4.04e-16!172;CL:0002087!6.29e-16!119;CL:0002032!1.39e-15!165;CL:0000837!1.39e-15!165;CL:0002031!3.37e-15!124;CL:0000990!7.13e-15!8;CL:0000080!1.12e-14!6;CL:0000451!4.03e-12!10;CL:0000838!5.10e-10!52;CL:0000542!8.64e-10!53;CL:0000051!8.64e-10!53;CL:0002057!1.76e-08!42;CL:0000860!8.12e-08!45;CL:0000945!2.08e-07!24;CL:0000826!2.08e-07!24;CL:0002009!2.17e-07!65;CL:0000763!3.49e-07!112;CL:0000049!3.49e-07!112;CL:0000946!8.21e-07!1;CL:0000786!8.21e-07!1;CL:0000980!8.21e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000453;1.52e-49;5!CL:0000990;9.31e-28;8!CL:0000451;8.59e-23;10!CL:0000946;1.31e-16;1!CL:0000786;1.31e-16;1!CL:0002127;2.25e-16;1!CL:0000911;2.25e-16;1!CL:0000814;2.25e-16;1!CL:0001014;4.02e-09;2!CL:0001016;4.02e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.52e-49,5;CL:0000990,9.31e-28,8;CL:0000451,8.59e-23,10;CL:0000946,1.41e-16,1;CL:0000786,1.41e-16,1;CL:0000980,1.41e-16,1;CL:0002127,2.63e-16,1;CL:0000914,2.63e-16,1;CL:0000911,2.63e-16,1;CL:0000814,2.63e-16,1;CL:0002042,2.63e-16,1;CL:0002039,2.63e-16,1;CL:0002040,2.63e-16,1;CL:0002041,2.63e-16,1;CL:0000988,2.70e-11,177;CL:0001014,4.02e-09,2;CL:0001016,4.02e-09,2;CL:0000785,5.94e-09,2;CL:0000955,5.94e-09,2;CL:0000818,5.94e-09,2;CL:0000954,5.94e-09,2;CL:0000816,5.94e-09,2;CL:0000893,8.09e-09,2;CL:0002489,8.09e-09,2;CL:0000809,8.09e-09,2;CL:0000808,8.09e-09,2;CL:0000894,8.09e-09,2;CL:0000806,8.09e-09,2;CL:0000807,8.09e-09,2;CL:0000805,8.09e-09,2;CL:0002425,8.09e-09,2;CL:0000738,3.40e-08,136;CL:0002032,8.65e-07,161;CL:0000837,8.65e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000954;5.71e-09;2!CL:0002425;7.49e-09;2 | |||
|ontology_enrichment_disease=DOID:630!9.15e-07!1;DOID:0050177!9.15e-07!1;DOID:0050427!9.15e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:630;2.25e-16;1!DOID:0050177;2.25e-16;1!DOID:0050427;2.25e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.93e-16,1;DOID:0050177,1.93e-16,1;DOID:0050427,1.93e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.00e-12!102;UBERON:0003061!2.00e-12!102;UBERON:0002193!5.59e-11!112;UBERON:0002106!7.65e-08!3;UBERON:0004854!7.65e-08!3;UBERON:0009034!7.65e-08!3;UBERON:0002095!7.65e-08!3;UBERON:0004782!7.65e-08!3;UBERON:0003281!7.65e-08!3;UBERON:0009664!7.65e-08!3;UBERON:0002296!7.65e-08!3;UBERON:0005602!7.65e-08!3;UBERON:0001179!7.65e-08!3;UBERON:0006293!7.65e-08!3;UBERON:0004177!2.81e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.37e-14;10!UBERON:0000178;6.30e-10;15!UBERON:0000179;6.30e-10;15!UBERON:0000463;6.30e-10;15!UBERON:0002390;7.60e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.34e-14,10;UBERON:0000358,1.34e-14,10;UBERON:0000307,1.34e-14,10;UBERON:0000091,1.34e-14,10;UBERON:0000087,1.34e-14,10;UBERON:0007010,1.34e-14,10;UBERON:0007806,1.34e-14,10;UBERON:0008780,1.34e-14,10;UBERON:0005728,1.34e-14,10;UBERON:0000178,6.20e-10,15;UBERON:0000179,6.20e-10,15;UBERON:0000463,6.20e-10,15;UBERON:0004177,1.41e-09,7;UBERON:0005057,1.41e-09,7;UBERON:0002390,4.04e-07,98;UBERON:0003061,4.04e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993374274723366,0.410502947249729,0.629686250509434,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.802177789880567,0.434021741431704,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0.47296445977717,0.344745680736619,0.645484683583826,0,0,0,0,0,0,0.639337125799041,0,0,0,0,1.13477044938228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0,1.10776324914963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.8199859596543,4.4483018020741,3.86361213170185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.39937339723601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7836850159905,3.45448584814744,2.61704630809351,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18944576355981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,1.99882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28227396921293 | |||
|short_description=p@chr2:231808553..231808564,+ | |||
}} |
Latest revision as of 07:34, 29 July 2015
Short description: | p@chr2:231808553..231808564, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:231808553..231808564, + |
Coexpression cluster: | C730_migratory_cord_Mast_B_b_CD14_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.34e-14 | 10 |
blastocyst | 1.34e-14 | 10 |
blastula | 1.34e-14 | 10 |
bilaminar disc | 1.34e-14 | 10 |
inner cell mass | 1.34e-14 | 10 |
cleaving embryo | 1.34e-14 | 10 |
connecting stalk | 1.34e-14 | 10 |
inner cell mass derived epiblast | 1.34e-14 | 10 |
extraembryonic mesoderm | 1.34e-14 | 10 |
blood | 6.20e-10 | 15 |
haemolymphatic fluid | 6.20e-10 | 15 |
organism substance | 6.20e-10 | 15 |
hemopoietic organ | 1.41e-09 | 7 |
immune organ | 1.41e-09 | 7 |
hematopoietic system | 4.04e-07 | 98 |
blood island | 4.04e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.93e-16 | 1 |
monogenic disease | 1.93e-16 | 1 |
xeroderma pigmentosum | 1.93e-16 | 1 |