FFCP PHASE1:Hg19::chr3:183892635..183892706,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1173 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=564 | |||
|TSSclassifier=strong | |||
|UniProt=Q96CW1,E9PFW3,C9JPV8,C9JTK4,F5H0H0,B4DJB1 | |||
|association_with_transcript=0bp_to_ENST00000292807,ENST00000411763,ENST00000427072,ENST00000448139,ENST00000460862,ENST00000466598,ENST00000487958,ENST00000539646,ENST00000540821_5end | |||
|cluster_id=chr3:183892635..183892706,+ | |||
|description=CAGE_peak_1_at_AP2M1_5end | |||
|id=chr3:183892635..183892706,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.31e-28!180;CL:0000222!2.58e-27!119;CL:0000183!1.52e-21!59;CL:0000680!7.78e-20!57;CL:0000056!7.78e-20!57;CL:0000355!7.78e-20!57;CL:0000187!1.13e-18!54;CL:0000192!6.75e-18!42;CL:0000514!6.75e-18!42;CL:0002321!1.19e-16!248;CL:0000220!1.22e-16!246;CL:0000393!1.59e-16!60;CL:0000211!1.59e-16!60;CL:0000359!1.37e-15!32;CL:0000057!1.95e-12!75;CL:0000144!9.26e-12!625;CL:0000548!2.93e-10!679;CL:0000004!2.93e-10!679;CL:0000255!2.93e-10!679;CL:0000012!9.58e-10!682;CL:0002371!1.09e-09!591;CL:0000213!1.83e-08!57;CL:0000215!1.83e-08!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.12e-14;32!CL:0000192;4.88e-13;43!CL:0000187;9.95e-11;55!CL:0000393;1.65e-08;61!CL:0000211;1.65e-08;61!CL:0000134;1.38e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.23e-28,121;CL:0000680,7.09e-20,58;CL:0000056,7.09e-20,58;CL:0000355,7.09e-20,58;CL:0000187,1.03e-18,55;CL:0000192,6.71e-18,43;CL:0000514,6.71e-18,43;CL:0002321,4.12e-17,250;CL:0000393,1.36e-16,61;CL:0000211,1.36e-16,61;CL:0000359,1.37e-15,32;CL:0000057,9.52e-13,76;CL:0000213,8.24e-09,58;CL:0000215,8.24e-09,58 | |||
|ontology_enrichment_development_v019=CL:0000514;4.88e-13;43!CL:0000355;1.04e-10;58!CL:0000222;1.05e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.93e-19!83;UBERON:0002329!6.93e-19!83;UBERON:0003077!6.93e-19!83;UBERON:0003059!6.93e-19!83;UBERON:0007282!6.93e-19!83;UBERON:0009618!6.93e-19!83;UBERON:0007285!6.93e-19!83;UBERON:0002049!2.79e-18!79;UBERON:0007798!2.79e-18!79;UBERON:0004290!1.03e-17!70;UBERON:0000119!2.44e-17!312;UBERON:0004535!2.68e-17!110;UBERON:0000475!3.12e-17!365;UBERON:0001009!4.97e-17!113;UBERON:0001134!1.12e-16!61;UBERON:0002036!1.12e-16!61;UBERON:0003082!1.12e-16!61;UBERON:0000486!1.52e-16!82;UBERON:0000483!1.60e-16!309;UBERON:0002385!7.87e-16!63;UBERON:0001015!7.87e-16!63;UBERON:0000383!7.87e-16!63;UBERON:0004872!1.18e-15!84;UBERON:0001637!1.44e-15!42;UBERON:0003509!1.44e-15!42;UBERON:0004572!1.44e-15!42;UBERON:0001981!1.56e-14!60;UBERON:0007500!1.56e-14!60;UBERON:0004537!1.56e-14!60;UBERON:0006965!1.56e-14!60;UBERON:0005256!1.59e-14!143;UBERON:0000055!4.17e-14!69;UBERON:0003914!1.46e-13!118;UBERON:0000468!7.81e-13!659;UBERON:0004573!3.23e-12!33;UBERON:0004571!3.23e-12!33;UBERON:0000025!5.37e-12!194;UBERON:0000477!1.88e-11!286;UBERON:0004111!2.40e-10!241;UBERON:0000481!4.11e-10!347;UBERON:0000490!5.54e-10!138;UBERON:0000467!1.36e-09!625;UBERON:0000480!2.75e-09!626;UBERON:0002100!2.96e-09!216;UBERON:0000923!7.04e-07!604;UBERON:0005291!7.04e-07!604;UBERON:0006598!7.04e-07!604;UBERON:0002532!7.04e-07!604;UBERON:0000922!7.51e-07!612;UBERON:0002050!7.93e-07!605;UBERON:0005423!7.93e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.93e-11;33!UBERON:0004571;5.93e-11;33!UBERON:0001637;6.97e-11;42!UBERON:0003509;6.97e-11;42!UBERON:0004572;6.97e-11;42!UBERON:0007500;3.09e-09;56!UBERON:0001981;3.09e-09;56!UBERON:0004537;3.09e-09;56!UBERON:0003914;1.21e-08;74!UBERON:0002049;2.48e-08;75!UBERON:0007798;2.48e-08;75!UBERON:0000055;3.24e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,3.91e-21,78;UBERON:0003077,5.35e-18,72;UBERON:0007285,5.35e-18,72;UBERON:0007524,5.43e-18,73;UBERON:0002049,6.13e-18,78;UBERON:0007798,6.13e-18,78;UBERON:0002329,8.61e-18,71;UBERON:0003059,8.61e-18,71;UBERON:0007282,8.61e-18,71;UBERON:0004290,8.61e-18,71;UBERON:0009618,8.61e-18,71;UBERON:0000119,1.99e-17,309;UBERON:0004535,5.64e-17,109;UBERON:0001134,9.59e-17,62;UBERON:0002036,9.59e-17,62;UBERON:0003082,9.59e-17,62;UBERON:0001009,1.04e-16,112;UBERON:0000486,1.22e-16,83;UBERON:0000483,1.31e-16,306;UBERON:0002385,6.61e-16,64;UBERON:0001015,6.61e-16,64;UBERON:0000383,6.61e-16,64;UBERON:0001637,1.44e-15,42;UBERON:0003509,1.44e-15,42;UBERON:0004572,1.44e-15,42;UBERON:0004872,2.50e-15,83;UBERON:0007500,3.36e-14,59;UBERON:0001981,3.36e-14,59;UBERON:0004537,3.36e-14,59;UBERON:0006965,3.36e-14,59;UBERON:0000055,8.83e-14,68;UBERON:0003914,1.89e-13,117;UBERON:0004573,3.23e-12,33;UBERON:0004571,3.23e-12,33;UBERON:0000025,3.84e-12,192;UBERON:0005256,6.36e-12,122;UBERON:0000490,2.94e-11,148;UBERON:0003104,1.31e-10,160;UBERON:0009142,1.31e-10,160;UBERON:0004111,1.62e-10,240;UBERON:0010314,1.23e-08,132;UBERON:0002100,4.50e-08,199;UBERON:0000926,4.95e-08,315;UBERON:0004120,4.95e-08,315;UBERON:0006603,4.95e-08,315;UBERON:0005423,1.58e-07,581;UBERON:0002050,1.81e-07,564;UBERON:0000923,2.97e-07,560;UBERON:0010316,2.97e-07,560;UBERON:0005291,2.97e-07,560;UBERON:0006598,2.97e-07,560;UBERON:0010317,2.97e-07,560;UBERON:0002532,2.97e-07,560;UBERON:0000922,3.11e-07,592 | |||
|phase1_expression=286.325125730397,305.949648640215,266.121914933194,375.274868824239,307.062271871547,333.233316206341,263.431873295043,351.236249625318,276.334394635429,324.860264054995,514.977261963651,187.204255915558,234.225076666867,292.45989204459,459.648160134619,366.417204816218,336.906241165403,389.985588266857,306.909730439229,469.829957621023,602.006039861791,403.729681263777,161.150860754785,228.306541021571,190.071556346531,60.5958307581254,65.7625721494066,59.0330859852594,137.677496897116,89.8160791547478,141.966385080842,275.826367343678,333.434952087523,257.718545086251,48.6494019644294,45.6363236284623,98.6497476165087,95.8412056760148,86.6352013071012,93.5316852785321,174.654069907141,145.752149708541,175.924112694149,105.122926637625,97.114117528024,96.305872291563,81.5825919538953,88.4010959246925,79.9042436909367,79.6907926732357,77.1043726652593,74.0189379551272,77.5677781657392,83.9130088658974,81.2558919566051,93.9329274317598,99.8836509211716,80.0015604624501,76.8270569850965,65.7904505505992,60.7370269509089,82.462825046679,93.747919082167,73.3106570916234,73.1327281344032,75.4622348839216,64.1506916465442,72.6108642591988,88.130613213014,71.2379410632783,76.2803373318045,63.3437533898611,53.7986058649504,97.5999422761171,86.1047414858426,106.506591918255,99.6354958269412,109.6291317743,88.0776215099999,82.3686829412208,70.0186703740797,104.483895953371,79.1983100075952,58.9829700163102,63.1551570243124,52.0610871531139,76.0752375368424,71.8440549943104,64.1213526601316,62.967547799334,51.7983801889598,44.0427892028204,43.9614212344013,79.3027971474155,98.6495070847503,108.250858842557,48.9807327583444,55.0215067848831,63.1196601928493,72.8933119903356,51.8216403947409,47.8182283792081,66.2410876586898,74.7564165699515,70.7054177939609,71.7769818450932,67.1593582137239,71.2187737674754,68.5412761640558,64.459658604641,53.0592034148829,62.5974665187713,53.0865896120176,39.0609609010981,71.0841561873842,68.3255336466324,70.8957913163554,62.5401950778386,71.6045728415193,73.9071761231904,62.5040115702162,72.2343553780764,74.5346839434975,77.687872970732,46.224368824368,68.1918485886769,78.8282877044205,54.0306071842283,55.0926803314025,57.7849371492368,297.444376903033,299.132583427822,272.986569535937,247.947258535812,317.346897432518,287.954879694118,274.373651732629,241.370895670107,253.258775182538,315.520932589228,301.097645356036,134.908447762644,309.650995048661,315.908345252334,369.33493397903,353.309236980213,370.819751887115,76.5554904020148,82.9392620631185,90.6356303244139,262.565140131417,303.662812072462,252.718285170329,254.388573865804,322.175567009208,244.30482124278,305.132651143743,204.924490021278,198.161808316498,174.054718637629,321.457795053099,252.410339098546,298.73195843896,211.038608118529,304.613372403542,173.062873414547,201.402847245674,189.750344614398,285.168945686543,242.062743189873,255.566432782918,81.7038588103592,116.334079244498,307.446306760487,305.140778340926,284.538759710311,248.267214024785,159.767997757089,295.79343075343,337.527915285669,334.124356633977,375.921343787752,203.532017151447,275.213903038373,269.221754427867,370.371625447147,311.711175143679,329.221611726484,250.040221541087,255.571376051913,195.478874161756,186.83828734223,190.362582576923,189.608589048035,201.09185868607,190.024688881305,230.82979514666,212.652511453488,221.05663477503,506.959878599481,636.695673649187,170.187811207561,178.168772297677,173.442136293099,296.309894094566,306.48779579902,234.221133835384,205.312251519638,209.527094484591,211.421814930382,252.410894281038,267.081075515118,302.35612078558,360.439115523835,316.212538907371,243.713023756388,436.907531142815,335.736919744672,221.287956336088,250.874680182796,325.898805930252,481.695781626348,326.065019013068,177.60672405707,174.284771057543,169.78832047029,166.494108866898,207.806676728089,188.23418744862,164.821077474439,177.129237314691,176.284064433626,381.736858884751,346.063624747772,363.294843157024,209.429935542423,308.964418154583,184.085380861997,192.523716069192,188.711636398766,185.845344054084,192.823308021779,205.47635615021,198.067191687282,198.1836797766,201.222763082962,395.651323678811,410.908397244096,432.15271189797,601.265629566867,86.193423678845,83.5403134175982,123.475090496413,66.2194649121976,44.1528494369778,370.243334624218,171.64944637909,218.059401319782,107.364942535622,161.381659911317,283.779033925293,469.01058816109,372.374862425205,251.105257176016,362.323230411746,183.345388656564,191.21301669414,179.599919709461,230.739684204108,224.064888306762,234.891023807377,149.060716893694,206.300053256755,212.775803149984,255.500816990465,218.61719994776,135.502044849409,138.341754732646,246.898445382396,179.822081832019,256.044846110461,144.715024647459,150.172991460474,142.148980038104,130.107185404654,173.0407567779,223.88532417119,217.262006448836,167.505985613714,160.98387900434,150.058877131054,370.817495930108,519.228441980437,202.853698580748,201.793148297891,354.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| |||
|short_description=p1@AP2M1 | |||
}} |
Latest revision as of 01:13, 17 September 2015
Short description: | p1@AP2M1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AP2M1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000292807, ENST00000411763, ENST00000427072, ENST00000448139, ENST00000460862, ENST00000466598, ENST00000487958, ENST00000539646, ENST00000540821_5end |
EntrezGene: | AP2M1 |
HGNC: | 564 |
UniProt: | Q96CW1E9PFW3C9JPV8C9JTK4F5H0H0B4DJB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.23e-28 | 121 |
muscle precursor cell | 7.09e-20 | 58 |
myoblast | 7.09e-20 | 58 |
multi-potent skeletal muscle stem cell | 7.09e-20 | 58 |
muscle cell | 1.03e-18 | 55 |
smooth muscle cell | 6.71e-18 | 43 |
smooth muscle myoblast | 6.71e-18 | 43 |
embryonic cell | 4.12e-17 | 250 |
electrically responsive cell | 1.36e-16 | 61 |
electrically active cell | 1.36e-16 | 61 |
vascular associated smooth muscle cell | 1.37e-15 | 32 |
fibroblast | 9.52e-13 | 76 |
lining cell | 8.24e-09 | 58 |
barrier cell | 8.24e-09 | 58 |