FFCP PHASE1:Hg19::chrX:10544942..10544977,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:10544942..10544977,-
|short_description=p5@MID1
|description=CAGE_peak_5_at_MID1_5end
|association_with_transcript=0bp_to_NM_001193277,uc004cte.3_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4281 | |EntrezGene=4281 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7095 | |HGNC=7095 | ||
|TSSclassifier=strong | |||
|UniProt=O15344 | |UniProt=O15344 | ||
|association_with_transcript=0bp_to_NM_001193277,uc004cte.3_5end | |||
|cluster_id=chrX:10544942..10544977,- | |||
|coexpression_cluster_id=C428 | |||
|description=CAGE_peak_5_at_MID1_5end | |||
|id=chrX:10544942..10544977,- | |||
|ontology_enrichment_celltype=CL:0002139!7.71e-31!24;CL:0000115!2.96e-28!35;CL:0000071!5.35e-23!18;CL:0002546!5.35e-23!18;CL:0002078!4.16e-20!44;CL:0000213!6.03e-14!57;CL:0000215!6.03e-14!57;CL:1000413!4.95e-12!9;CL:0005020!2.19e-09!6;CL:0002138!2.19e-09!6;CL:0005022!2.19e-09!6;CL:0002543!1.02e-08!6;CL:0002544!1.31e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.39e-38;24!CL:0000115;1.84e-31;36!CL:0000071;2.30e-28;18!CL:0002078;8.38e-18;45!CL:1000413;1.16e-14;9!CL:0000213;2.65e-12;58!CL:0000215;2.65e-12;58!CL:0002138;2.39e-11;6!CL:0002543;1.74e-10;6!CL:0002544;2.21e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.16e-38,24;CL:0000115,2.89e-37,36;CL:0000071,2.15e-28,18;CL:0002546,2.15e-28,18;CL:0002078,1.36e-27,45;CL:0000213,4.88e-19,58;CL:0000215,4.88e-19,58;CL:1000413,1.17e-14,9;CL:0005020,2.38e-11,6;CL:0002138,2.38e-11,6;CL:0005022,2.38e-11,6;CL:0002543,1.62e-10,6;CL:0002544,2.24e-10,6 | |||
|ontology_enrichment_development_v019=CL:0002546;2.30e-28;18!CL:0005022;2.39e-11;6!UBERON:0004872;5.72e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;2.30e-28;18!UBERON:0001986;2.30e-28;18!UBERON:0004852;2.30e-28;18!UBERON:0000487;4.77e-22;22!UBERON:0006914;1.17e-18;25!UBERON:0003915;1.16e-14;9!UBERON:0004700;1.16e-14;9!UBERON:0001917;1.16e-14;9!UBERON:0000490;9.70e-12;33!UBERON:0002465;4.75e-10;10!UBERON:0007023;5.85e-10;114!UBERON:0000055;2.71e-09;65!UBERON:0001638;9.40e-09;9!UBERON:0003920;9.40e-09;9!UBERON:0004582;9.40e-09;9!UBERON:0001473;3.45e-08;8!UBERON:0004536;3.45e-08;8!UBERON:0006558;3.45e-08;8!UBERON:0007500;8.02e-07;56!UBERON:0001981;8.02e-07;56!UBERON:0004537;8.02e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.02e-41,114;UBERON:0004638,2.15e-28,18;UBERON:0001986,2.15e-28,18;UBERON:0004852,2.15e-28,18;UBERON:0004111,5.75e-25,240;UBERON:0000487,4.52e-22,22;UBERON:0000025,7.02e-21,192;UBERON:0006914,1.12e-18,25;UBERON:0000055,5.91e-18,68;UBERON:0003915,1.17e-14,9;UBERON:0004700,1.17e-14,9;UBERON:0001917,1.17e-14,9;UBERON:0002049,2.73e-14,78;UBERON:0007798,2.73e-14,78;UBERON:0007500,4.47e-13,59;UBERON:0001981,4.47e-13,59;UBERON:0004537,4.47e-13,59;UBERON:0006965,4.47e-13,59;UBERON:0004872,1.24e-12,83;UBERON:0000483,9.51e-12,306;UBERON:0000119,1.97e-11,309;UBERON:0001009,2.86e-11,112;UBERON:0003914,9.35e-11,117;UBERON:0004535,2.81e-10,109;UBERON:0002465,4.74e-10,10;UBERON:0001049,3.85e-09,56;UBERON:0005068,3.85e-09,56;UBERON:0006241,3.85e-09,56;UBERON:0007135,3.85e-09,56;UBERON:0001638,9.16e-09,9;UBERON:0003920,9.16e-09,9;UBERON:0004582,9.16e-09,9;UBERON:0001473,3.44e-08,8;UBERON:0004536,3.44e-08,8;UBERON:0006558,3.44e-08,8;UBERON:0003075,1.18e-07,82;UBERON:0007284,1.18e-07,82;UBERON:0000073,1.77e-07,53;UBERON:0002616,1.77e-07,53;UBERON:0002780,3.30e-07,41;UBERON:0001890,3.30e-07,41;UBERON:0003080,3.30e-07,41;UBERON:0006240,3.30e-07,41;UBERON:0003887,4.56e-07,12;UBERON:0002346,5.74e-07,86;UBERON:0003103,6.47e-07,68 | |||
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| ||
|short_description=p5@MID1 | |||
}} | }} |
Latest revision as of 21:53, 18 September 2015
Short description: | p5@MID1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MID1_5end |
Coexpression cluster: | C428_Endothelial_Renal_Lymphatic_Hepatic_adipose_heart_breast |
Association with transcript: | 0bp_to_NM_001193277, uc004cte.3_5end |
EntrezGene: | MID1 |
HGNC: | 7095 |
UniProt: | O15344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.16e-38 | 24 |
endothelial cell | 2.89e-37 | 36 |
blood vessel endothelial cell | 2.15e-28 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.15e-28 | 18 |
meso-epithelial cell | 1.36e-27 | 45 |
lining cell | 4.88e-19 | 58 |
barrier cell | 4.88e-19 | 58 |
endothelial cell of artery | 1.17e-14 | 9 |
lymphangioblast | 2.38e-11 | 6 |
endothelial cell of lymphatic vessel | 2.38e-11 | 6 |
vascular lymphangioblast | 2.38e-11 | 6 |
vein endothelial cell | 1.62e-10 | 6 |
aortic endothelial cell | 2.24e-10 | 6 |