FFCP PHASE1:Hg19::chrX:114827818..114827842,+: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:114827818..114827842,+
|short_description=p4@PLS3
|description=CAGE_peak_4_at_PLS3_5end
|association_with_transcript=0bp_to_ENST00000420625,NM_001136025,NM...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5358 | |EntrezGene=5358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9091 | |HGNC=9091 | ||
|TSSclassifier=strong | |||
|UniProt=P13797,A8K579,B4DPW9 | |UniProt=P13797,A8K579,B4DPW9 | ||
|association_with_transcript=0bp_to_ENST00000420625,NM_001136025,NM_001172335,uc004eqe.2,uc011mtg.1,uc011mth.1_5end | |||
|cluster_id=chrX:114827818..114827842,+ | |||
|coexpression_cluster_id=C4846 | |||
|description=CAGE_peak_4_at_PLS3_5end | |||
|id=chrX:114827818..114827842,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.67e-19!119;CL:0000359!7.26e-16!32;CL:0000076!1.26e-15!62;CL:0000220!6.27e-15!246;CL:0002321!2.41e-14!248;CL:0000192!7.49e-13!42;CL:0000514!7.49e-13!42;CL:0002139!1.17e-12!24;CL:0000680!1.85e-12!57;CL:0000056!1.85e-12!57;CL:0000355!1.85e-12!57;CL:0000055!2.29e-12!180;CL:0000187!6.03e-12!54;CL:0000183!8.03e-11!59;CL:0000393!5.68e-10!60;CL:0000211!5.68e-10!60;CL:0000071!1.46e-09!18;CL:0002546!1.46e-09!18;CL:0000057!3.24e-09!75;CL:0000213!9.07e-08!57;CL:0000215!9.07e-08!57;CL:0002539!1.80e-07!10;CL:0000115!3.37e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.14e-17;32!CL:0002139;3.53e-15;24!CL:0000071;2.25e-11;18!CL:0000192;1.79e-10;43!CL:0002539;6.69e-09;10!CL:0000076;9.23e-08;63!CL:0000115;1.17e-07;36!CL:0000187;5.20e-07;55!CL:1000413;6.03e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.32e-21,121;CL:0000359,2.27e-18,32;CL:0002321,1.40e-16,250;CL:0002139,2.84e-15,24;CL:0000076,1.96e-14,63;CL:0000192,8.94e-14,43;CL:0000514,8.94e-14,43;CL:0000680,2.05e-13,58;CL:0000056,2.05e-13,58;CL:0000355,2.05e-13,58;CL:0000187,3.94e-13,55;CL:0000393,1.50e-11,61;CL:0000211,1.50e-11,61;CL:0000071,1.90e-11,18;CL:0002546,1.90e-11,18;CL:0000115,5.75e-09,36;CL:0002539,7.20e-09,10;CL:0000057,1.44e-08,76;CL:0000213,1.98e-08,58;CL:0000215,1.98e-08,58;CL:1000413,5.55e-07,9;CL:0002078,6.66e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002546;2.25e-11;18!CL:0000514;1.79e-10;43!CL:0000355;2.57e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;9.39e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.92e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.46e-26!79;UBERON:0007798!1.46e-26!79;UBERON:0000055!7.72e-26!69;UBERON:0001981!1.92e-25!60;UBERON:0007500!1.92e-25!60;UBERON:0004537!1.92e-25!60;UBERON:0006965!1.92e-25!60;UBERON:0004872!1.11e-23!84;UBERON:0001637!9.96e-22!42;UBERON:0003509!9.96e-22!42;UBERON:0004572!9.96e-22!42;UBERON:0001009!6.13e-18!113;UBERON:0004535!1.16e-17!110;UBERON:0004573!1.53e-17!33;UBERON:0004571!1.53e-17!33;UBERON:0000914!1.96e-15!83;UBERON:0002329!1.96e-15!83;UBERON:0003077!1.96e-15!83;UBERON:0003059!1.96e-15!83;UBERON:0007282!1.96e-15!83;UBERON:0009618!1.96e-15!83;UBERON:0007285!1.96e-15!83;UBERON:0004290!9.62e-14!70;UBERON:0003914!2.48e-13!118;UBERON:0000486!2.50e-13!82;UBERON:0000947!2.24e-12!21;UBERON:0010191!2.24e-12!21;UBERON:0000490!7.39e-12!138;UBERON:0001134!9.39e-12!61;UBERON:0002036!9.39e-12!61;UBERON:0003082!9.39e-12!61;UBERON:0003102!1.50e-11!95;UBERON:0002385!4.42e-11!63;UBERON:0001015!4.42e-11!63;UBERON:0000383!4.42e-11!63;UBERON:0000477!4.83e-11!286;UBERON:0000119!9.82e-11!312;UBERON:0000483!1.94e-10!309;UBERON:0001986!1.46e-09!18;UBERON:0004638!1.46e-09!18;UBERON:0004852!1.46e-09!18;UBERON:0005256!2.04e-09!143;UBERON:0004111!2.60e-09!241;UBERON:0000475!7.65e-09!365;UBERON:0000487!1.77e-08!22;UBERON:0002199!2.55e-08!45;UBERON:0002416!2.55e-08!45;UBERON:0002100!4.49e-08!216;UBERON:0000467!1.36e-07!625;UBERON:0004237!1.80e-07!10;UBERON:0004695!1.80e-07!10;UBERON:0002111!1.80e-07!10;UBERON:0004178!1.80e-07!10;UBERON:0000480!1.98e-07!626;UBERON:0000468!2.02e-07!659;UBERON:0002097!2.27e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.24e-19;33!UBERON:0004571;1.24e-19;33!UBERON:0001637;5.64e-19;42!UBERON:0003509;5.64e-19;42!UBERON:0004572;5.64e-19;42!UBERON:0007500;5.16e-17;56!UBERON:0001981;5.16e-17;56!UBERON:0004537;5.16e-17;56!UBERON:0000055;2.57e-15;65!UBERON:0000947;5.26e-15;21!UBERON:0010191;5.26e-15;21!UBERON:0002049;2.65e-13;75!UBERON:0007798;2.65e-13;75!UBERON:0004638;2.25e-11;18!UBERON:0001986;2.25e-11;18!UBERON:0004852;2.25e-11;18!UBERON:0000487;4.97e-10;22!UBERON:0003914;7.89e-10;74!UBERON:0004237;6.69e-09;10!UBERON:0004695;6.69e-09;10!UBERON:0002111;6.69e-09;10!UBERON:0004178;6.69e-09;10!UBERON:0006914;5.95e-08;25!UBERON:0004535;5.15e-07;109!UBERON:0003915;6.03e-07;9!UBERON:0004700;6.03e-07;9!UBERON:0001917;6.03e-07;9 | |||
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| ||
|short_description=p4@PLS3 | |||
}} | }} |
Latest revision as of 03:18, 19 September 2015
Short description: | p4@PLS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PLS3_5end |
Coexpression cluster: | C4846_amniotic_astrocytoma_Gingival_cervical_Smooth_Mallassezderived_Mammary |
Association with transcript: | 0bp_to_ENST00000420625, NM_001136025, NM_001172335, uc004eqe.2, uc011mtg.1, uc011mth.1_5end |
EntrezGene: | PLS3 |
HGNC: | 9091 |
UniProt: | P13797A8K579B4DPW9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.32e-21 | 121 |
vascular associated smooth muscle cell | 2.27e-18 | 32 |
embryonic cell | 1.40e-16 | 250 |
endothelial cell of vascular tree | 2.84e-15 | 24 |
squamous epithelial cell | 1.96e-14 | 63 |
smooth muscle cell | 8.94e-14 | 43 |
smooth muscle myoblast | 8.94e-14 | 43 |
muscle precursor cell | 2.05e-13 | 58 |
myoblast | 2.05e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.05e-13 | 58 |
muscle cell | 3.94e-13 | 55 |
electrically responsive cell | 1.50e-11 | 61 |
electrically active cell | 1.50e-11 | 61 |
blood vessel endothelial cell | 1.90e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.90e-11 | 18 |
endothelial cell | 5.75e-09 | 36 |
aortic smooth muscle cell | 7.20e-09 | 10 |
fibroblast | 1.44e-08 | 76 |
lining cell | 1.98e-08 | 58 |
barrier cell | 1.98e-08 | 58 |
endothelial cell of artery | 5.55e-07 | 9 |
meso-epithelial cell | 6.66e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.92e-08 | 14 |