FFCP PHASE1:Mm9::chr18:59335062..59335117,+: Difference between revisions
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{{FFCP|EntrezGene=78923|HGNC=|MCL_coexpression_id=3151|UniProt=Q5DTK1|association_with_transcript=7bp_to_ENSMUST00000080721_5end|description=CAGE_peak_2_at_Chsy3_5end|id=chr18:59335062..59335117,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!2.28e-10!114;UBERON:0000468!2.35e-09!333;UBERON:0002020!7.48e-09!34;UBERON:0004111!1.00e-08!122;UBERON:0002021!4.20e-08!10;UBERON:0000411!4.20e-08!10;UBERON:0001950!4.20e-08!10;UBERON:0003056!1.06e-07!49;UBERON:0003080!1.50e-07!40;UBERON:0002791!2.43e-07!29;UBERON:0003528!2.43e-07!29;UBERON:0001893!2.43e-07!29;UBERON:0001049!3.14e-07!52;UBERON:0005068!3.14e-07!52;UBERON:0006241!3.14e-07!52;UBERON:0007135!3.14e-07!52;UBERON:0002780!3.63e-07!39;UBERON:0001890!3.63e-07!39;UBERON:0006240!3.63e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0000025,5.99e-10,114;UBERON:0002020,1.94e-09,34;UBERON:0002021,1.11e-08,10;UBERON:0000411,1.11e-08,10;UBERON:0001950,1.11e-08,10;UBERON:0002346,3.49e-08,64;UBERON:0003075,3.49e-08,64;UBERON:0007284,3.49e-08,64;UBERON:0003056,4.81e-08,49;UBERON:0001049,4.97e-08,52;UBERON:0005068,4.97e-08,52;UBERON:0006241,4.97e-08,52;UBERON:0007135,4.97e-08,52;UBERON:0003080,5.99e-08,40;UBERON:0004111,7.46e-08,122;UBERON:0000073,8.48e-08,54;UBERON:0003528,8.51e-08,29;UBERON:0002791,8.51e-08,29;UBERON:0001893,8.51e-08,29;UBERON:0002780,1.56e-07,39;UBERON:0001890,1.56e-07,39;UBERON:0006240,1.56e-07,39;UBERON:0010371,4.17e-07,73;UBERON:0000955,5.23e-07,47;UBERON:0006238,5.23e-07,47|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0,0,0,1.61582251287033,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0.219686182734472,0.194429899074283,0.699932108126813,0,0,0,0,3.08711323243136,2.57880095944881,1.54701627683233,1.01158230429799,1.5869729378161,2.53532561402472,0.338844532069132,0.889294796111139,0.899899717281399,0.988866362566974,0,0,0,1.14058573539325,0.810035629990144,1.89292465216244,3.99911378165325,3.3130281142742,3.91970557487853,2.20444583341944,0,1.10115880999389,1.91531007127782,1.38245879930619,2.2420668914133,1.55528994124096,3.64639359389732,2.79182999001381,2.8138130501584,2.59757021220577,4.12480019663135,3.98640706237488,3.16879057903011,1.13589289999776,0.755715601067855,2.89864488701678,5.16254326188832,10.879541339324,6.47643829965381,7.79731700937203,7.16843019355737,1.96622188184453,0,0,0,0.845060518660083,0,0,0,1.94841936910093,2.53359865475099,3.0331466700887,1.7127581957859,0.258937883647172,0.29688427812965,0.693941307064543,1.21786191324856,0.922461989024234,0.753613202763113,1.41106448562846,0.502666365318702,0.988779870937496,1.59059292611903,0,4.85300549842228,2.20841518460394,3.87900202508178,0,0,0.41889341362691,0.255457055208591,0.599075622529601,0,0.127070227073065,4.79330046095433,8.6925114535539,10.5549655774806,11.6462294528825,14.8314965251592,4.57133698031032,7.30085683804909,3.05518091550949,2.86136032403214,0.758168275301024,0.420883711772948,1.04096354370163,2.06911893990126,1.62055916824814,2.71268672104287,2.78949646520444,2.3060469651273,3.18585863503078,1.81092359517311,0.431135985865684,2.45837904218165,4.04687585577082,5.69908904311695,6.95118123063995,5.92028683087683,5.55611768301447,0.59710280045548,0.702213187313235,0.51469581422943,0.284163499395593,0.207125772535502,0.938104239924385,0.180062061461015,0.473489471170421,0.196764231747404,0.617068451549513,0.465067889500816,1.07309360559848,0.817357396570186,0.658239399653922,1.31333971263276,1.29710095273369,1.31579988682799,0.219550115291051,0.939444931322602,4.41608891984667,2.88132914661996,0,0.264450566663544,0.426576501070468,1.62565670302307,1.54640953586512,2.21851877085677,1.33426826306922,0.570676878337677,0,2.47048432086016,0.502670417600539,1.79060824837036,0.779856348476481,0.898819408654221,1.08069024937347,0.199141273254367,0.948339504765408,1.14248512609729,2.25415471346161,1.22190796707189,1.16371492300575,2.24434623649019,1.51767689098217,0.738050739898011,0.784993639206874,0.493588655687202,7.70776830426587,0.500535317148282,0.786235980452812,0.674586337154561,1.21716072833102,2.17059443777175,2.29163266603278,4.31544206176216,1.94562272130042,3.29473695825698,0,3.72140947668503,5.30464044294753,5.55673531483646,4.4849353380478,4.3419916922703,1.10851914099963,1.70542270593436,3.58522948172457,3.56464680127895,2.34690248288502,3.35012514883632,4.52282917683426,4.87834119644497,10.5615546551148,7.9727288273559,9.40783135079174,1.80249646187312,2.59027472798843,2.4590339958857,0,0.54390568381871,0,0.275936746304732,3.05046120976805,3.04750385139728,0,2.01976741763498,1.89304931649754,1.17131623288992,1.50796378412959,0.955875191810208,1.55959071857676,1.69845918473299,1.21443210502468,1.75353514746787,1.97643888973262,27.3123118958536,0.425820255624806,2.13678724400706,3.58351310577867,0.989820737835213,0,0.485561272309963,0.90697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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=78923 | |||
|HGNC= | |||
|MCL_coexpression_id=3151 | |||
|TSSclassifier=NA | |||
|UniProt=Q5DTK1 | |||
|association_with_transcript=7bp_to_ENSMUST00000080721_5end | |||
|cluster_id=chr18:59335062..59335117,+ | |||
|description=CAGE_peak_2_at_Chsy3_5end | |||
|id=chr18:59335062..59335117,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!2.28e-10!114;UBERON:0000468!2.35e-09!333;UBERON:0002020!7.48e-09!34;UBERON:0004111!1.00e-08!122;UBERON:0002021!4.20e-08!10;UBERON:0000411!4.20e-08!10;UBERON:0001950!4.20e-08!10;UBERON:0003056!1.06e-07!49;UBERON:0003080!1.50e-07!40;UBERON:0002791!2.43e-07!29;UBERON:0003528!2.43e-07!29;UBERON:0001893!2.43e-07!29;UBERON:0001049!3.14e-07!52;UBERON:0005068!3.14e-07!52;UBERON:0006241!3.14e-07!52;UBERON:0007135!3.14e-07!52;UBERON:0002780!3.63e-07!39;UBERON:0001890!3.63e-07!39;UBERON:0006240!3.63e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,5.99e-10,114;UBERON:0002020,1.94e-09,34;UBERON:0002021,1.11e-08,10;UBERON:0000411,1.11e-08,10;UBERON:0001950,1.11e-08,10;UBERON:0002346,3.49e-08,64;UBERON:0003075,3.49e-08,64;UBERON:0007284,3.49e-08,64;UBERON:0003056,4.81e-08,49;UBERON:0001049,4.97e-08,52;UBERON:0005068,4.97e-08,52;UBERON:0006241,4.97e-08,52;UBERON:0007135,4.97e-08,52;UBERON:0003080,5.99e-08,40;UBERON:0004111,7.46e-08,122;UBERON:0000073,8.48e-08,54;UBERON:0003528,8.51e-08,29;UBERON:0002791,8.51e-08,29;UBERON:0001893,8.51e-08,29;UBERON:0002780,1.56e-07,39;UBERON:0001890,1.56e-07,39;UBERON:0006240,1.56e-07,39;UBERON:0010371,4.17e-07,73;UBERON:0000955,5.23e-07,47;UBERON:0006238,5.23e-07,47 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0,0,0,1.61582251287033,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0.219686182734472,0.194429899074283,0.699932108126813,0,0,0,0,3.08711323243136,2.57880095944881,1.54701627683233,1.01158230429799,1.5869729378161,2.53532561402472,0.338844532069132,0.889294796111139,0.899899717281399,0.988866362566974,0,0,0,1.14058573539325,0.810035629990144,1.89292465216244,3.99911378165325,3.3130281142742,3.91970557487853,2.20444583341944,0,1.10115880999389,1.91531007127782,1.38245879930619,2.2420668914133,1.55528994124096,3.64639359389732,2.79182999001381,2.8138130501584,2.59757021220577,4.12480019663135,3.98640706237488,3.16879057903011,1.13589289999776,0.755715601067855,2.89864488701678,5.16254326188832,10.879541339324,6.47643829965381,7.79731700937203,7.16843019355737,1.96622188184453,0,0,0,0.845060518660083,0,0,0,1.94841936910093,2.53359865475099,3.0331466700887,1.7127581957859,0.258937883647172,0.29688427812965,0.693941307064543,1.21786191324856,0.922461989024234,0.753613202763113,1.41106448562846,0.502666365318702,0.988779870937496,1.59059292611903,0,4.85300549842228,2.20841518460394,3.87900202508178,0,0,0.41889341362691,0.255457055208591,0.599075622529601,0,0.127070227073065,4.79330046095433,8.6925114535539,10.5549655774806,11.6462294528825,14.8314965251592,4.57133698031032,7.30085683804909,3.05518091550949,2.86136032403214,0.758168275301024,0.420883711772948,1.04096354370163,2.06911893990126,1.62055916824814,2.71268672104287,2.78949646520444,2.3060469651273,3.18585863503078,1.81092359517311,0.431135985865684,2.45837904218165,4.04687585577082,5.69908904311695,6.95118123063995,5.92028683087683,5.55611768301447,0.59710280045548,0.702213187313235,0.51469581422943,0.284163499395593,0.207125772535502,0.938104239924385,0.180062061461015,0.473489471170421,0.196764231747404,0.617068451549513,0.465067889500816,1.07309360559848,0.817357396570186,0.658239399653922,1.31333971263276,1.29710095273369,1.31579988682799,0.219550115291051,0.939444931322602,4.41608891984667,2.88132914661996,0,0.264450566663544,0.426576501070468,1.62565670302307,1.54640953586512,2.21851877085677,1.33426826306922,0.570676878337677,0,2.47048432086016,0.502670417600539,1.79060824837036,0.779856348476481,0.898819408654221,1.08069024937347,0.199141273254367,0.948339504765408,1.14248512609729,2.25415471346161,1.22190796707189,1.16371492300575,2.24434623649019,1.51767689098217,0.738050739898011,0.784993639206874,0.493588655687202,7.70776830426587,0.500535317148282,0.786235980452812,0.674586337154561,1.21716072833102,2.17059443777175,2.29163266603278,4.31544206176216,1.94562272130042,3.29473695825698,0,3.72140947668503,5.30464044294753,5.55673531483646,4.4849353380478,4.3419916922703,1.10851914099963,1.70542270593436,3.58522948172457,3.56464680127895,2.34690248288502,3.35012514883632,4.52282917683426,4.87834119644497,10.5615546551148,7.9727288273559,9.40783135079174,1.80249646187312,2.59027472798843,2.4590339958857,0,0.54390568381871,0,0.275936746304732,3.05046120976805,3.04750385139728,0,2.01976741763498,1.89304931649754,1.17131623288992,1.50796378412959,0.955875191810208,1.55959071857676,1.69845918473299,1.21443210502468,1.75353514746787,1.97643888973262,27.3123118958536,0.425820255624806,2.13678724400706,3.58351310577867,0.989820737835213,0,0.485561272309963,0.906970670894253,0.377210159511796,2.06711325016541,1.53717573971964,2.06742634534577,1.09060118843252,2.85197902707777,0.632073515871632,0,0,0,1.62054984628179,1.16422815404479,0.857348140126369,1.95074257006501,3.38900753443934,2.13913726782757,1.2178597964584,1.17335854031855,5.2958017715955,0.441056796109924,2.63818004706368,1.93757312035087,2.23157822234177,1.67121281604391,0.984845398470368,1.45740418314925,2.03967832211561,1.53783792718067,2.68302928352189,3.1483069652851,1.50694765603753,1.0935538217682,0.686334519619568,0,0.839708713941948,0.414599921413271,1.90934123603023,1.26534397432454,2.64315307264903,3.02414954301044,2.29997125615916,2.83871332870031,2.96701562046606,3.88471241909079,1.04702376793612,0.259229946583586,0.621339313086926,0,0,0.827292452285488,1.36115831840833,1.54991788173277,1.18269287843545,1.40828686374905,1.5624526181274,0.419437377702843,0.241584120826006,0.576060012515731,0,0.810900861160657,1.1298205288131,1.03936658382236,0.537080087002444,0.993406773906324,0.360586348559907,0.443068581523732,0.302899349844443,0.381034033274999,0.100826185136841,0.0974578807397524,0.192423683280659,0,0.226730383615211,0.887943813496259,3.49884040776955,0.671538465456314,0.579568782096571,0.750729901804728,0.36630324853453,0.643105137237198,0,15.8130515932779,10.5874804396651,14.8952833494243,15.8104927756193,18.4972280338073,14.3524840504043,14.8504950050997,10.3573876741571,14.0474146785103,12.9440077937955,0.31136204275253,0.798049746802062,2.56100408631201,4.37592090722929,2.30574478890781,2.38996560985018,4.66718128383392,3.296560915822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| |||
|short_description=p2@Chsy3 | |||
}} |
Latest revision as of 12:47, 1 October 2015
Short description: | p2@Chsy3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Chsy3_5end |
Coexpression cluster: | MCL_coexpression_mm9:3151 |
Association with transcript: | 7bp_to_ENSMUST00000080721_5end |
EntrezGene: | Chsy3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tube | 5.99e-10 | 114 |
gray matter | 1.94e-09 | 34 |
occipital lobe | 1.11e-08 | 10 |
visual cortex | 1.11e-08 | 10 |
neocortex | 1.11e-08 | 10 |
neurectoderm | 3.49e-08 | 64 |
neural plate | 3.49e-08 | 64 |
presumptive neural plate | 3.49e-08 | 64 |
pre-chordal neural plate | 4.81e-08 | 49 |
neural tube | 4.97e-08 | 52 |
neural rod | 4.97e-08 | 52 |
future spinal cord | 4.97e-08 | 52 |
neural keel | 4.97e-08 | 52 |
anterior neural tube | 5.99e-08 | 40 |
anatomical conduit | 7.46e-08 | 122 |
regional part of nervous system | 8.48e-08 | 54 |
brain grey matter | 8.51e-08 | 29 |
regional part of telencephalon | 8.51e-08 | 29 |
telencephalon | 8.51e-08 | 29 |
regional part of forebrain | 1.56e-07 | 39 |
forebrain | 1.56e-07 | 39 |
future forebrain | 1.56e-07 | 39 |
ecto-epithelium | 4.17e-07 | 73 |
brain | 5.23e-07 | 47 |
future brain | 5.23e-07 | 47 |