FFCP PHASE1:Mm9::chr19:37281926..37281988,-: Difference between revisions
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{{FFCP|EntrezGene=208922|HGNC=|MCL_coexpression_id=0|UniProt=Q7TN99,D3Z5R9|association_with_transcript=0bp_to_ENSMUST00000079754,ENSMUST00000126188,ENSMUST00000136286_5end|description=CAGE_peak_1_at_Cpeb3_5end|id=chr19:37281926..37281988,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!1.36e-14!114;UBERON:0004111!1.99e-14!122;UBERON:0000955!2.63e-10!50;UBERON:0006238!2.63e-10!50;UBERON:0001049!7.86e-10!52;UBERON:0005068!7.86e-10!52;UBERON:0006241!7.86e-10!52;UBERON:0007135!7.86e-10!52;UBERON:0002616!8.35e-10!49;UBERON:0007023!3.02e-09!51;UBERON:0002020!2.90e-08!34;UBERON:0001017!4.27e-08!73;UBERON:0005743!4.27e-08!73;UBERON:0000468!5.29e-08!333;UBERON:0000033!5.42e-08!63;UBERON:0000073!2.21e-07!75;UBERON:0001016!2.21e-07!75;UBERON:0002791!3.13e-07!29;UBERON:0003528!3.13e-07!29;UBERON:0001893!3.13e-07!29;UBERON:0003080!5.00e-07!40;UBERON:0002346!6.69e-07!71;UBERON:0003075!6.69e-07!71;UBERON:0007284!6.69e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0000025,1.20e-14,114;UBERON:0004111,2.60e-14,122;UBERON:0000073,5.96e-11,54;UBERON:0001049,7.47e-10,52;UBERON:0005068,7.47e-10,52;UBERON:0006241,7.47e-10,52;UBERON:0007135,7.47e-10,52;UBERON:0007023,2.78e-09,51;UBERON:0000955,1.03e-08,47;UBERON:0006238,1.03e-08,47;UBERON:0002020,2.43e-08,34;UBERON:0002616,3.08e-08,46;UBERON:0001017,3.93e-08,73;UBERON:0002346,1.52e-07,64;UBERON:0003075,1.52e-07,64;UBERON:0007284,1.52e-07,64;UBERON:0001016,2.47e-07,75;UBERON:0003528,2.69e-07,29;UBERON:0002791,2.69e-07,29;UBERON:0001893,2.69e-07,29;UBERON:0003080,3.85e-07,40;UBERON:0010314,5.46e-07,92|phase1_expression=0.480446541314382,2.44282785347553,1.36499771816861,8.46899791659124,15.0268718983904,1.51091344720701,0.700837921786577,0.387369970324729,0.422366166455,0.70219357896598,0,0.0797721589953364,1.36960583944965,0.961624426608971,2.33176833270964,4.656931149966,5.59649502502517,0.157731082679119,0.274228867211478,0.42438965179803,59.700389686051,0,0,0.639969691173627,0.68822784320151,0.57423196411502,0.430761996159075,1.72376986148711,1.52018735565099,2.52030129759931,0,2.54012269383853,1.23012957516914,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0.683045484958446,0,3.9028013572429,4.46058497365864,3.30384153891027,2.34717403304412,0.872100625521786,2.41654801007919,2.91644848611425,0.55994568650145,0,0.167782606057736,0,0.672187598284928,1.02903774414379,2.86533439938757,1.03134418455488,4.24864567805155,5.81890077199236,6.97214543856797,0.338844532069132,0.889294796111139,1.3498495759221,4.94433181283487,2.1314403448383,2.09720077362883,3.07374644257244,2.59224030771194,2.43010688997043,2.73422449756797,7.42692559449889,4.41737081903227,2.20483438586917,1.82106394934649,3.67687514644008,29.731287869835,23.3667828695894,29.1852413186863,4.3522474950964,5.12330804173494,6.77187381723788,18.9844439320939,19.6966913511088,20.7805616976462,7.07108605136802,6.26435395516053,5.21918448310842,0.757261933331841,1.058001841495,4.63783181922684,2.58127163094416,4.75979933595425,5.93673510801599,10.3964226791627,14.3368603871147,16.5724415755467,2.55645483867087,1.81850203222008,1.41335829804136,0.985903938436763,5.13305909657271,0,0,0.432982082022428,0,0.505524445014783,13.9304333257253,2.58937883647172,11.875371125186,0.346970653532272,1.82679286987285,1.38369298353635,1.65794904607885,4.46837087115678,4.64966387919799,3.95511948374998,21.256105467227,15.9229899350977,4.36770494858005,10.1587098491781,7.27312879702833,5.59175283654366,28.9852989041432,20.9446706813455,4.34276993854605,0,0,0,31.0066623567983,27.9075367719362,5.15182843662744,21.2065670634577,17.3886510984625,30.1292664611362,19.7934340942664,1.42575109390443,5.59831367745419,6.06534620240819,13.4682787767343,0.520481771850815,0.229902104433473,0.720248519221397,1.65775299619287,2.38127747029647,2.8185018462667,3.09215691047105,16.815719098036,0.862271971731369,2.26927296201383,1.75951124163949,1.09597866213787,1.39023624612799,4.179025998266,2.05782136407943,0.59710280045548,0,0,0,1.03562886267751,1.40715635988658,2.52086886045421,3.07768156260773,3.93528463494808,4.62801338662135,6.0458825635106,5.36546802799238,4.08678698285093,4.11399624783701,5.08919138645195,13.7816976227955,12.8655988934292,11.4166059951346,11.8101648509127,18.9260953707715,4.73361216944708,10.2429822724977,4.49565963328025,0.426576501070468,0.928946687441754,1.28867461322093,1.00841762311671,2.00140239460383,2.47293313946327,2.84717436926707,1.4822905925161,2.76468729680296,2.38747766449381,1.75467678407208,0.898819408654221,3.45820879799511,4.58024928485045,0.569003702859245,1.02823661348756,2.25415471346161,3.25842124552503,1.93952487167626,1.47285221769669,4.99568643281633,7.67572769493931,8.94892748695836,8.26760998276064,6.52195779591728,3.83743743147016,3.93117990226406,5.62155280962134,9.12870546248263,7.47649195232492,6.11102044275408,8.34318798607351,4.70192157647603,3.56929837144506,1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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=208922 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q7TN99,D3Z5R9 | |||
|association_with_transcript=0bp_to_ENSMUST00000079754,ENSMUST00000126188,ENSMUST00000136286_5end | |||
|cluster_id=chr19:37281926..37281988,- | |||
|description=CAGE_peak_1_at_Cpeb3_5end | |||
|id=chr19:37281926..37281988,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!1.36e-14!114;UBERON:0004111!1.99e-14!122;UBERON:0000955!2.63e-10!50;UBERON:0006238!2.63e-10!50;UBERON:0001049!7.86e-10!52;UBERON:0005068!7.86e-10!52;UBERON:0006241!7.86e-10!52;UBERON:0007135!7.86e-10!52;UBERON:0002616!8.35e-10!49;UBERON:0007023!3.02e-09!51;UBERON:0002020!2.90e-08!34;UBERON:0001017!4.27e-08!73;UBERON:0005743!4.27e-08!73;UBERON:0000468!5.29e-08!333;UBERON:0000033!5.42e-08!63;UBERON:0000073!2.21e-07!75;UBERON:0001016!2.21e-07!75;UBERON:0002791!3.13e-07!29;UBERON:0003528!3.13e-07!29;UBERON:0001893!3.13e-07!29;UBERON:0003080!5.00e-07!40;UBERON:0002346!6.69e-07!71;UBERON:0003075!6.69e-07!71;UBERON:0007284!6.69e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,1.20e-14,114;UBERON:0004111,2.60e-14,122;UBERON:0000073,5.96e-11,54;UBERON:0001049,7.47e-10,52;UBERON:0005068,7.47e-10,52;UBERON:0006241,7.47e-10,52;UBERON:0007135,7.47e-10,52;UBERON:0007023,2.78e-09,51;UBERON:0000955,1.03e-08,47;UBERON:0006238,1.03e-08,47;UBERON:0002020,2.43e-08,34;UBERON:0002616,3.08e-08,46;UBERON:0001017,3.93e-08,73;UBERON:0002346,1.52e-07,64;UBERON:0003075,1.52e-07,64;UBERON:0007284,1.52e-07,64;UBERON:0001016,2.47e-07,75;UBERON:0003528,2.69e-07,29;UBERON:0002791,2.69e-07,29;UBERON:0001893,2.69e-07,29;UBERON:0003080,3.85e-07,40;UBERON:0010314,5.46e-07,92 | |||
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| |||
|short_description=p1@Cpeb3 | |||
}} |
Latest revision as of 16:36, 25 September 2015
Short description: | p1@Cpeb3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cpeb3_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000079754, ENSMUST00000126188, ENSMUST00000136286_5end |
EntrezGene: | Cpeb3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tube | 1.20e-14 | 114 |
anatomical conduit | 2.60e-14 | 122 |
regional part of nervous system | 5.96e-11 | 54 |
neural tube | 7.47e-10 | 52 |
neural rod | 7.47e-10 | 52 |
future spinal cord | 7.47e-10 | 52 |
neural keel | 7.47e-10 | 52 |
adult organism | 2.78e-09 | 51 |
brain | 1.03e-08 | 47 |
future brain | 1.03e-08 | 47 |
gray matter | 2.43e-08 | 34 |
regional part of brain | 3.08e-08 | 46 |
central nervous system | 3.93e-08 | 73 |
neurectoderm | 1.52e-07 | 64 |
neural plate | 1.52e-07 | 64 |
presumptive neural plate | 1.52e-07 | 64 |
nervous system | 2.47e-07 | 75 |
brain grey matter | 2.69e-07 | 29 |
regional part of telencephalon | 2.69e-07 | 29 |
telencephalon | 2.69e-07 | 29 |
anterior neural tube | 3.85e-07 | 40 |
structure with developmental contribution from neural crest | 5.46e-07 | 92 |