FFCP PHASE1:Mm9::chr2:116798113..116798135,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=169|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:116798113..116798135,+|id=chr2:116798113..116798135,+|ontology_enrichment_celltype=CL:0002320!5.93e-16!46;CL:0000134!5.93e-16!46;CL:0000988!1.25e-14!32;CL:0002032!1.25e-14!32;CL:0000037!1.25e-14!32;CL:0000566!1.25e-14!32;CL:0000837!1.25e-14!32;CL:0000219!1.63e-14!54;CL:0000034!9.95e-12!97;CL:0000063!1.48e-10!66;CL:0000723!5.14e-10!91;CL:0000048!5.14e-10!91;CL:0000144!3.75e-09!121;CL:0000012!3.75e-09!121;CL:0000049!1.04e-08!19;CL:0002031!1.43e-08!25;CL:0000838!7.25e-08!12;CL:0000738!9.67e-08!17;CL:0002087!9.67e-08!17;CL:0002371!3.24e-07!118;CL:0000542!4.15e-07!13;CL:0000051!4.15e-07!13;CL:0000084!9.95e-07!11;CL:0000827!9.95e-07!11|ontology_enrichment_celltype_v019_2=CL:0000049,2.84e-10,19;CL:0000034,1.86e-09,97;CL:0002320,1.16e-08,46;CL:0000134,1.16e-08,46;CL:0000988,7.07e-08,32;CL:0002032,7.07e-08,32;CL:0000037,7.07e-08,32;CL:0000837,7.07e-08,32;CL:0000557,1.05e-07,7;CL:0000219,3.26e-07,54;CL:0000213,6.93e-07,1;CL:0002078,6.93e-07,1;CL:0000115,6.93e-07,1;CL:0002262,6.93e-07,1;CL:1000398,6.93e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,5.92e-08,3;DOID:4045,5.92e-08,3|ontology_enrichment_uberon=UBERON:0002384!5.93e-16!46;UBERON:0002204!8.74e-10!32;UBERON:0002371!9.20e-09!16;UBERON:0001474!5.41e-08!22;UBERON:0004765!5.41e-08!22;UBERON:0001434!5.41e-08!22|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.16e-08,46;UBERON:0002394,6.93e-07,1;UBERON:0001281,6.93e-07,1;UBERON:0000353,6.93e-07,1;UBERON:0003497,6.93e-07,1;UBERON:0003909,6.93e-07,1;UBERON:0003928,6.93e-07,1;UBERON:0003835,6.93e-07,1;UBERON:0003513,6.93e-07,1;UBERON:0001280,6.93e-07,1;UBERON:0004647,6.93e-07,1;UBERON:0002294,6.93e-07,1;UBERON:0001173,6.93e-07,1;UBERON:0004912,6.93e-07,1;UBERON:0005171,6.93e-07,1|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.645616617207881,0.563154888606667,0.468129052643987,0.34243593645101,0,0,0.0874204024189974,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0.42438965179803,0,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,3.1253413780952,0.523523743973798,12.3528612486513,0.683045484958446,1.94204141212461,0.125896817975577,0.202753862439029,0,0,0,0,0,0,0,1.34226084846189,0,0.336093799142464,0,0,0,0,0,0,0,0,0.899899717281399,1.97773272513395,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.151143120213571,6.66688324013859,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.58520996047362,6.59893004092748,7.37007317023775,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0.199034266818493,5.61770549850588,7.97778512055617,3.9782889915383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0.370389054739423,0,0,0,14.2781881194838,18.6135431590465,7.60099855924331,0,0,0,0,0,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0.214871054048298,0,0,0|short_description=p@chr2:116798113..116798135,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=169 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:116798113..116798135,+ | |||
|description=CAGE_peak_at_chr2:116798113..116798135,+ | |||
|id=chr2:116798113..116798135,+ | |||
|ontology_enrichment_celltype=CL:0002320!5.93e-16!46;CL:0000134!5.93e-16!46;CL:0000988!1.25e-14!32;CL:0002032!1.25e-14!32;CL:0000037!1.25e-14!32;CL:0000566!1.25e-14!32;CL:0000837!1.25e-14!32;CL:0000219!1.63e-14!54;CL:0000034!9.95e-12!97;CL:0000063!1.48e-10!66;CL:0000723!5.14e-10!91;CL:0000048!5.14e-10!91;CL:0000144!3.75e-09!121;CL:0000012!3.75e-09!121;CL:0000049!1.04e-08!19;CL:0002031!1.43e-08!25;CL:0000838!7.25e-08!12;CL:0000738!9.67e-08!17;CL:0002087!9.67e-08!17;CL:0002371!3.24e-07!118;CL:0000542!4.15e-07!13;CL:0000051!4.15e-07!13;CL:0000084!9.95e-07!11;CL:0000827!9.95e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,2.84e-10,19;CL:0000034,1.86e-09,97;CL:0002320,1.16e-08,46;CL:0000134,1.16e-08,46;CL:0000988,7.07e-08,32;CL:0002032,7.07e-08,32;CL:0000037,7.07e-08,32;CL:0000837,7.07e-08,32;CL:0000557,1.05e-07,7;CL:0000219,3.26e-07,54;CL:0000213,6.93e-07,1;CL:0002078,6.93e-07,1;CL:0000115,6.93e-07,1;CL:0002262,6.93e-07,1;CL:1000398,6.93e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.92e-08,3;DOID:4045,5.92e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002384!5.93e-16!46;UBERON:0002204!8.74e-10!32;UBERON:0002371!9.20e-09!16;UBERON:0001474!5.41e-08!22;UBERON:0004765!5.41e-08!22;UBERON:0001434!5.41e-08!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.16e-08,46;UBERON:0002394,6.93e-07,1;UBERON:0001281,6.93e-07,1;UBERON:0000353,6.93e-07,1;UBERON:0003497,6.93e-07,1;UBERON:0003909,6.93e-07,1;UBERON:0003928,6.93e-07,1;UBERON:0003835,6.93e-07,1;UBERON:0003513,6.93e-07,1;UBERON:0001280,6.93e-07,1;UBERON:0004647,6.93e-07,1;UBERON:0002294,6.93e-07,1;UBERON:0001173,6.93e-07,1;UBERON:0004912,6.93e-07,1;UBERON:0005171,6.93e-07,1 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.645616617207881,0.563154888606667,0.468129052643987,0.34243593645101,0,0,0.0874204024189974,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0.42438965179803,0,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,3.1253413780952,0.523523743973798,12.3528612486513,0.683045484958446,1.94204141212461,0.125896817975577,0.202753862439029,0,0,0,0,0,0,0,1.34226084846189,0,0.336093799142464,0,0,0,0,0,0,0,0,0.899899717281399,1.97773272513395,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.151143120213571,6.66688324013859,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.58520996047362,6.59893004092748,7.37007317023775,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0.199034266818493,5.61770549850588,7.97778512055617,3.9782889915383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0.370389054739423,0,0,0,14.2781881194838,18.6135431590465,7.60099855924331,0,0,0,0,0,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr2:116798113..116798135,+ | |||
}} |
Latest revision as of 10:21, 6 August 2015
Short description: | p@chr2:116798113..116798135, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:116798113..116798135, + |
Coexpression cluster: | MCL_coexpression_mm9:169 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 2.84e-10 | 19 |
stem cell | 1.86e-09 | 97 |
connective tissue cell | 1.16e-08 | 46 |
mesenchymal cell | 1.16e-08 | 46 |
hematopoietic cell | 7.07e-08 | 32 |
hematopoietic oligopotent progenitor cell | 7.07e-08 | 32 |
hematopoietic stem cell | 7.07e-08 | 32 |
hematopoietic multipotent progenitor cell | 7.07e-08 | 32 |
granulocyte monocyte progenitor cell | 1.05e-07 | 7 |
motile cell | 3.26e-07 | 54 |
lining cell | 6.93e-07 | 1 |
meso-epithelial cell | 6.93e-07 | 1 |
endothelial cell | 6.93e-07 | 1 |
endothelial cell of sinusoid | 6.93e-07 | 1 |
endothelial cell of hepatic sinusoid | 6.93e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.16e-08 | 46 |
bile duct | 6.93e-07 | 1 |
hepatic sinusoid | 6.93e-07 | 1 |
parenchyma | 6.93e-07 | 1 |
abdomen blood vessel | 6.93e-07 | 1 |
sinusoid | 6.93e-07 | 1 |
digestive system duct | 6.93e-07 | 1 |
abdominal segment blood vessel | 6.93e-07 | 1 |
trunk blood vessel | 6.93e-07 | 1 |
liver parenchyma | 6.93e-07 | 1 |
liver lobule | 6.93e-07 | 1 |
biliary system | 6.93e-07 | 1 |
biliary tree | 6.93e-07 | 1 |
biliary bud | 6.93e-07 | 1 |
hepatic duct | 6.93e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.92e-08 | 3 |
muscle cancer | 5.92e-08 | 3 |