FFCP PHASE1:Mm9::chr2:74505324..74505330,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=523|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:74505324..74505330,+|id=chr2:74505324..74505330,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002102!1.10e-15!8;UBERON:0004710!1.10e-15!8;UBERON:0005419!1.10e-15!8;UBERON:0005417!1.10e-15!8;UBERON:0005729!1.10e-15!8;UBERON:0003102!1.84e-15!23;UBERON:0000026!3.61e-09!13;UBERON:0004708!3.61e-09!13;UBERON:0002101!3.61e-09!13;UBERON:0004357!3.61e-09!13;UBERON:0009872!3.61e-09!13;UBERON:0004347!3.61e-09!13;UBERON:0005732!3.61e-09!13;UBERON:0005733!3.61e-09!13;UBERON:0000162!6.61e-08!3;UBERON:0001353!6.61e-08!3;UBERON:0000163!6.61e-08!3;UBERON:0006866!6.61e-08!3;UBERON:0001046!6.61e-08!3;UBERON:0000164!6.61e-08!3;UBERON:0000931!6.61e-08!3|ontology_enrichment_uberon_v019_2=UBERON:0002102,1.21e-61,7;UBERON:0004710,1.21e-61,7;UBERON:0005419,1.21e-61,7;UBERON:0005417,1.21e-61,7;UBERON:0005729,1.21e-61,7;UBERON:0010708,6.00e-54,8;UBERON:0000026,5.67e-36,12;UBERON:0004708,5.67e-36,12;UBERON:0002101,5.67e-36,12;UBERON:0004357,5.67e-36,12;UBERON:0004347,5.67e-36,12;UBERON:0005732,5.67e-36,12;UBERON:0005733,5.67e-36,12;UBERON:0010707,3.33e-33,13;UBERON:0003102,7.26e-32,22;UBERON:0000162,3.16e-12,3;UBERON:0001353,3.16e-12,3;UBERON:0000163,3.16e-12,3;UBERON:0006866,3.16e-12,3;UBERON:0001046,3.16e-12,3;UBERON:0000164,3.16e-12,3;UBERON:0000931,3.16e-12,3;UBERON:0000998,5.62e-10,1;UBERON:0007194,5.62e-10,1;UBERON:0006868,5.62e-10,1;UBERON:0000153,6.75e-10,43;UBERON:0000996,8.42e-10,1;UBERON:0001255,1.03e-09,1;UBERON:0001556,1.03e-09,1;UBERON:0000161,1.04e-07,5;UBERON:0004122,1.04e-07,5;UBERON:0000926,8.41e-07,120;UBERON:0004120,8.41e-07,120;UBERON:0006603,8.41e-07,120|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15567992932842,4.9167580843633,6.862093842394,2.6303487891309,6.67313398141435,2.78601733217733,3.08673204611915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0.596869416123452,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0.161464426695906,0.180938774784468,0.238744688006273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35232715822533,0,0,2.14368379079066,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0,0.183843508450014,0.222246727801615,0,0,0,0.25347929989024,0,0,0,0.114870937911227,0.952587382566147,0,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.169229215783353,0.365855945745545,0,0,0,0.237270036248348,0.197008964751127,0,0.309873682371932,0,0,0,0.429742108096597,0.765153328275374,0.661774257358546,0|short_description=p@chr2:74505324..74505330,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=523 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:74505324..74505330,+ | |||
|description=CAGE_peak_at_chr2:74505324..74505330,+ | |||
|id=chr2:74505324..74505330,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002102!1.10e-15!8;UBERON:0004710!1.10e-15!8;UBERON:0005419!1.10e-15!8;UBERON:0005417!1.10e-15!8;UBERON:0005729!1.10e-15!8;UBERON:0003102!1.84e-15!23;UBERON:0000026!3.61e-09!13;UBERON:0004708!3.61e-09!13;UBERON:0002101!3.61e-09!13;UBERON:0004357!3.61e-09!13;UBERON:0009872!3.61e-09!13;UBERON:0004347!3.61e-09!13;UBERON:0005732!3.61e-09!13;UBERON:0005733!3.61e-09!13;UBERON:0000162!6.61e-08!3;UBERON:0001353!6.61e-08!3;UBERON:0000163!6.61e-08!3;UBERON:0006866!6.61e-08!3;UBERON:0001046!6.61e-08!3;UBERON:0000164!6.61e-08!3;UBERON:0000931!6.61e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002102,1.21e-61,7;UBERON:0004710,1.21e-61,7;UBERON:0005419,1.21e-61,7;UBERON:0005417,1.21e-61,7;UBERON:0005729,1.21e-61,7;UBERON:0010708,6.00e-54,8;UBERON:0000026,5.67e-36,12;UBERON:0004708,5.67e-36,12;UBERON:0002101,5.67e-36,12;UBERON:0004357,5.67e-36,12;UBERON:0004347,5.67e-36,12;UBERON:0005732,5.67e-36,12;UBERON:0005733,5.67e-36,12;UBERON:0010707,3.33e-33,13;UBERON:0003102,7.26e-32,22;UBERON:0000162,3.16e-12,3;UBERON:0001353,3.16e-12,3;UBERON:0000163,3.16e-12,3;UBERON:0006866,3.16e-12,3;UBERON:0001046,3.16e-12,3;UBERON:0000164,3.16e-12,3;UBERON:0000931,3.16e-12,3;UBERON:0000998,5.62e-10,1;UBERON:0007194,5.62e-10,1;UBERON:0006868,5.62e-10,1;UBERON:0000153,6.75e-10,43;UBERON:0000996,8.42e-10,1;UBERON:0001255,1.03e-09,1;UBERON:0001556,1.03e-09,1;UBERON:0000161,1.04e-07,5;UBERON:0004122,1.04e-07,5;UBERON:0000926,8.41e-07,120;UBERON:0004120,8.41e-07,120;UBERON:0006603,8.41e-07,120 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15567992932842,4.9167580843633,6.862093842394,2.6303487891309,6.67313398141435,2.78601733217733,3.08673204611915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0.596869416123452,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0.161464426695906,0.180938774784468,0.238744688006273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35232715822533,0,0,2.14368379079066,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0,0.183843508450014,0.222246727801615,0,0,0,0.25347929989024,0,0,0,0.114870937911227,0.952587382566147,0,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.169229215783353,0.365855945745545,0,0,0,0.237270036248348,0.197008964751127,0,0.309873682371932,0,0,0,0.429742108096597,0.765153328275374,0.661774257358546,0 | |||
|short_description=p@chr2:74505324..74505330,+ | |||
}} |
Latest revision as of 11:13, 5 August 2015
Short description: | p@chr2:74505324..74505330, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:74505324..74505330, + |
Coexpression cluster: | MCL_coexpression_mm9:523 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
forelimb | 1.21e-61 | 7 |
pectoral appendage | 1.21e-61 | 7 |
pectoral appendage bud | 1.21e-61 | 7 |
forelimb bud | 1.21e-61 | 7 |
forelimb/pectoral fin field | 1.21e-61 | 7 |
pectoral complex | 6.00e-54 | 8 |
appendage | 5.67e-36 | 12 |
paired limb/fin | 5.67e-36 | 12 |
limb | 5.67e-36 | 12 |
paired limb/fin bud | 5.67e-36 | 12 |
limb bud | 5.67e-36 | 12 |
limb/fin field | 5.67e-36 | 12 |
limb field | 5.67e-36 | 12 |
appendage girdle complex | 3.33e-33 | 13 |
surface structure | 7.26e-32 | 22 |
cloaca | 3.16e-12 | 3 |
anal region | 3.16e-12 | 3 |
embryonic cloaca | 3.16e-12 | 3 |
terminal part of digestive tract | 3.16e-12 | 3 |
hindgut | 3.16e-12 | 3 |
primitive urogenital sinus | 3.16e-12 | 3 |
proctodeum | 3.16e-12 | 3 |
seminal vesicle | 5.62e-10 | 1 |
vesicular gland | 5.62e-10 | 1 |
seminal fluid secreting gland | 5.62e-10 | 1 |
anterior region of body | 6.75e-10 | 43 |
vagina | 8.42e-10 | 1 |
urinary bladder | 1.03e-09 | 1 |
lower urinary tract | 1.03e-09 | 1 |
orifice | 1.04e-07 | 5 |
genitourinary system | 1.04e-07 | 5 |
mesoderm | 8.41e-07 | 120 |
mesoderm-derived structure | 8.41e-07 | 120 |
presumptive mesoderm | 8.41e-07 | 120 |