FFCP PHASE1:Hg19::chr9:127054254..127054276,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10783 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7749 | |||
|TSSclassifier=strong | |||
|UniProt=Q5TBH2 | |||
|association_with_transcript=0bp_to_ENST00000422297_5end | |||
|cluster_id=chr9:127054254..127054276,+ | |||
|coexpression_cluster_id=C4799 | |||
|description=CAGE_peak_5_at_NEK6_5end | |||
|id=chr9:127054254..127054276,+ | |||
|ontology_enrichment_celltype=CL:0000763!7.88e-44!112;CL:0000049!7.88e-44!112;CL:0000557!1.05e-37!71;CL:0000988!5.48e-35!182;CL:0000839!9.08e-35!70;CL:0000037!2.57e-34!172;CL:0000566!2.57e-34!172;CL:0002032!1.27e-32!165;CL:0000837!1.27e-32!165;CL:0002009!1.72e-31!65;CL:0000766!1.73e-30!76;CL:0002194!1.28e-29!63;CL:0000576!1.28e-29!63;CL:0000040!1.28e-29!63;CL:0000559!1.28e-29!63;CL:0000738!2.17e-24!140;CL:0002031!5.75e-23!124;CL:0002057!6.10e-20!42;CL:0002087!4.96e-18!119;CL:0000860!8.49e-18!45;CL:0000451!3.36e-12!10;CL:0000990!2.53e-10!8;CL:0000840!1.82e-07!5;CL:0001029!1.82e-07!5;CL:0002274!2.35e-07!5;CL:0000457!2.35e-07!5;CL:0002191!2.35e-07!5;CL:0000097!2.35e-07!5;CL:0000831!2.35e-07!5;CL:0002028!2.35e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000451;2.48e-26;10!CL:0000473;1.52e-24;39!CL:0000234;1.52e-24;39!CL:0000990;6.12e-22;8!CL:0000860;1.48e-19;33!CL:0002057;1.48e-19;33!CL:0000766;8.14e-17;69!CL:0000235;1.99e-16;6!CL:0000840;2.55e-15;5!CL:0000763;2.59e-15;100!CL:0000097;3.56e-15;5!CL:0000576;2.21e-14;48!CL:0000453;5.66e-13;5!CL:0000738;3.83e-11;136!CL:0000163;3.41e-08;9!CL:0000784;4.32e-08;3!CL:0000988;4.82e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.90e-63,108;CL:0000049,2.90e-63,108;CL:0000557,1.71e-54,67;CL:0000037,4.22e-54,168;CL:0002032,3.44e-51,161;CL:0000837,3.44e-51,161;CL:0000988,1.48e-50,177;CL:0000839,6.94e-47,66;CL:0000766,1.69e-44,72;CL:0002009,8.22e-42,61;CL:0000738,4.12e-41,136;CL:0002194,4.70e-38,59;CL:0000576,4.70e-38,59;CL:0000040,4.70e-38,59;CL:0000559,4.70e-38,59;CL:0002031,1.67e-36,120;CL:0000473,4.26e-27,48;CL:0000234,4.26e-27,48;CL:0000451,1.43e-26,10;CL:0002087,1.90e-25,115;CL:0000990,3.79e-22,8;CL:0000134,2.19e-17,354;CL:0000860,7.29e-17,42;CL:0002057,7.29e-17,42;CL:0002320,9.61e-17,361;CL:0000235,1.47e-16,6;CL:0000840,1.93e-15,5;CL:0001029,1.93e-15,5;CL:0000097,3.53e-15,5;CL:0002028,3.53e-15,5;CL:0000219,1.74e-14,386;CL:0000453,4.81e-13,5;CL:0000034,2.86e-12,441;CL:0000048,9.82e-12,427;CL:0000723,2.34e-11,433;CL:0000784,3.16e-08,3;CL:0000163,3.39e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000049;5.84e-20;108!CL:0002057;9.67e-14;42 | |||
|ontology_enrichment_disease=DOID:8692!2.70e-10!31;DOID:1240!1.25e-08!39;DOID:2531!2.43e-07!51;DOID:0060083!2.43e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.67e-11;31!DOID:1240;8.67e-08;39!DOID:2531;3.36e-07;51!DOID:0060083;3.36e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,6.16e-12,31;DOID:1240,7.50e-09,39;DOID:2531,2.40e-08,51;DOID:0060083,2.40e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.08e-33!80;UBERON:0001474!4.58e-32!86;UBERON:0002390!6.45e-30!102;UBERON:0003061!6.45e-30!102;UBERON:0004765!7.44e-27!101;UBERON:0001434!7.44e-27!101;UBERON:0002193!4.43e-26!112;UBERON:0002405!5.90e-23!115;UBERON:0002204!1.28e-12!167;UBERON:0007023!1.32e-08!115;UBERON:0005743!1.85e-08!86;UBERON:0001893!3.81e-08!34;UBERON:0002791!1.15e-07!33;UBERON:0003081!1.80e-07!216;UBERON:0001049!1.92e-07!57;UBERON:0005068!1.92e-07!57;UBERON:0006241!1.92e-07!57;UBERON:0007135!1.92e-07!57;UBERON:0002780!3.83e-07!41;UBERON:0001890!3.83e-07!41;UBERON:0006240!3.83e-07!41;UBERON:0001017!5.16e-07!82;UBERON:0002020!5.30e-07!34;UBERON:0003528!5.30e-07!34;UBERON:0000955!5.31e-07!69;UBERON:0006238!5.31e-07!69;UBERON:0001869!5.57e-07!32;UBERON:0003080!7.95e-07!42;UBERON:0002616!8.95e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.21e-49,76;UBERON:0001474,8.25e-45,82;UBERON:0002405,1.71e-40,93;UBERON:0004765,7.70e-40,90;UBERON:0002390,7.60e-38,98;UBERON:0003061,7.60e-38,98;UBERON:0001434,9.65e-35,100;UBERON:0002193,2.76e-33,108;UBERON:0002384,1.18e-16,371;UBERON:0002204,2.12e-16,167;UBERON:0003081,1.58e-12,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753255837568817,7.94699419778693,5.91124244039609,7.47752422479953,0,0,1.08371286321253,0,0,0,0,0,1.17440175733939,0.553995408531877,0.401088894940283,0.434021741431704,1.56740831967947,5.18229865630367,0.77272670290256,1.45398238779565,5.29026321164333,4.60909716256851,2.09186133215116,3.28934310417461,3.40677007984614,0.863077176966451,1.5369642391746,2.36482229888585,0.689491361473237,0.645484683583826,1.35426486594342,2.44715041405386,2.72906150057846,3.14612878223118,0.918251677112708,2.24650318953266,1.91801137739712,0.659702600373432,1.59570926097305,3.40979800426155,0,0,0,0.502497330513487,2.60741459210101,0.868755378820466,0,1.10483290796269,0,0.422510572623884,0,0.419317291016752,0,0,0,1.42506371870624,0.59675003159727,0.730656615058536,0,0,0,0,0,0,0,0,0.569212969109448,0,0,3.96513985737078,3.36305137788922,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.175669571386252,0.196468613246569,0,0,2.92092654289215,5.74628133087582,3.19099105245276,1.66943437013739,4.57595928624102,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,5.41677413392274,5.14809383306323,1.93220510975347,0,0,0,0,0,0,18.2285398021499,34.7791314352243,25.7086863270557,33.435829192735,41.4075181638526,0,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,26.7572317410619,23.6060832973099,10.5416969741516,0.239624855491583,0,0,0,0,0,0,0,0,0.256686072559497,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587403472388222,0.343143423810856,0,0,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522870902049801,1.02580050046556,0.984043937099117,0.325378394664303,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0.744316738719335,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557409525377156,0,0,0,3.5924286857907,25.6617195977371,12.0653942152613,7.46630462631478,36.2228359766362,0.228234679033192,0.626719583092093,12.5317238545034,0.169291777801603,0.1605880751037,1.00899853595524,0,8.93113896364988,0.614481528616916,1.78940886313933,1.16794399198336,6.83858333907141,0,0,19.4728088502708,6.6614393599564,0,0,1.17206543417515,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0.20453736500431,12.3084805461069,0,0.269605053441981,0,0.511572370226872,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0.627921025580099,0.166211681900156,0,0,0,0,0,0,0.163232808159148,0,0,0.995261931078505,0.530745387020035,0,0,0.247127877893006,0.208843899010911,1.34802265961354,0,0.702793337176017,0,0,0,0,1.20990716048664,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0.288950589901519,1.20084057741958,0.136905378891993,1.27746588066972,0,0.788662062837943,0,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0,0,0,0,1.43944664511834,0,0.544813624446302,0,0,0,5.39937339723601,2.32140586367385,0.242998226632099,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0.129282956361551,0,0,0,0.427149650270779,0.314408610199332,1.24271716604159,0,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.221858103073705,0.620964029413834,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0.303859956177382,0.138258436151731,13.2505010010784,1.19578356282027,1.96278473107013,0,0,0,0.999936979274649,1.70706767510625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.770750701157514,0,0.319267718114302,0,0.252071696221718,0.207471757392654,0.322951291263702,0,0,0,0,0,0,0,0.596748666348824,0.300841313397029,0,0,0,0,0,0.405225507710368,0,0,0.507326481551255,1.64092442705466,0.548257766857182,0,0,0,0,0,0,0,0.266107110487916,11.984334705801,0,0.40781839786099,0.394636641377094,0,0,0.78493092850514,0,0,0,0.215927591218621,0.9555033757741,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0.245148321753905,0,0.588925401344836,1.18818560130834,0,0,0.187967835959707,0.515663103788617,11.3932917754419,0,0,0,0,0,0.716697915757256,0,0.475940431336403,0.436350690340377,0,0,0,0,0.252332849670158,0,1.52038201213724,0,0,0,0,0,0,0,0.103432995861895,0.426467963801962,0,0.258355639344024,0.248298857183432,0,0,0,0,0,0.336760265072938,0.286888821570705,0.332660356546013,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0.402547587182052,19.234109538194 | |||
|short_description=p5@NEK6 | |||
}} |
Latest revision as of 00:18, 25 September 2015
Short description: | p5@NEK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NEK6_5end |
Coexpression cluster: | C4799_Mast_acute_Monocytederived_xeroderma_plasma_b_migratory |
Association with transcript: | 0bp_to_ENST00000422297_5end |
EntrezGene: | NEK6 |
HGNC: | 7749 |
UniProt: | Q5TBH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.21e-49 | 76 |
bone element | 8.25e-45 | 82 |
immune system | 1.71e-40 | 93 |
skeletal element | 7.70e-40 | 90 |
hematopoietic system | 7.60e-38 | 98 |
blood island | 7.60e-38 | 98 |
skeletal system | 9.65e-35 | 100 |
hemolymphoid system | 2.76e-33 | 108 |
connective tissue | 1.18e-16 | 371 |
musculoskeletal system | 2.12e-16 | 167 |
lateral plate mesoderm | 1.58e-12 | 203 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.16e-12 | 31 |
leukemia | 7.50e-09 | 39 |
hematologic cancer | 2.40e-08 | 51 |
immune system cancer | 2.40e-08 | 51 |