FF:457-17C6: Difference between revisions

Latest revision as of 19:16, 4 June 2020

Name:	heart, embryo E16
Species:	Mouse (Mus musculus)
Library ID:	CNhs11021
Sample type:	developmental
Genomic View:	UCSC
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	C57BL/6J
tissue	heart
dev stage	16 days embryo
sex	mixture
age	NA
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	NA
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	NA
extraction protocol (Details)	NA

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005268

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs11021		CAGE		DRX008976		DRR009850

Accession ID Mm9

Library id		BAM		CTSS
CNhs11021		DRZ001275		DRZ002658

Accession ID Mm10

Library id		BAM		CTSS
CNhs11021		DRZ012625		DRZ014008

Download raw sequence, BAM & CTSS

Mm9

Fasta	BAM	CTSS
download	download	donwload

Mm10

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

CNhs11021

0	0
1	0
10	0.248
100	0
1000	0.304
1001	0.297
1002	0.412
1003	0.0211
1004	0
1005	-0.151
1006	0.279
1007	0.0272
1008	0
1009	0.104
101	-0.0179
1010	0
1011	-0.0231
1012	0.117
1013	-0.207
1014	0.563
1015	0.0448
1016	0.109
1017	0
1018	0
1019	0
102	0
1020	0
1021	0
1022	0.455
1023	0
1024	0.158
1025	0.048
1026	0
1027	0
1028	0.0623
1029	0.186
103	0.201
1030	0
1031	0.255
1032	0.0264
1033	-0.00419
1034	0
1035	0.611
1036	-0.0614
1037	0
1038	0.0704
1039	0.172
104	0
1040	0.102
1041	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11021

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0159
MA0003.1	MA0003.1	0.283
MA0004.1	MA0004.1	0.233
MA0006.1	MA0006.1	0.942
MA0007.1	MA0007.1	0.397
MA0009.1	MA0009.1	0.932
MA0014.1	MA0014.1	0.54
MA0017.1	MA0017.1	0.00392
MA0018.2	MA0018.2	0.0119
MA0019.1	MA0019.1	0.298
MA0024.1	MA0024.1	0.0196
MA0025.1	MA0025.1	0.081
MA0027.1	MA0027.1	0.183
MA0028.1	MA0028.1	0.365
MA0029.1	MA0029.1	0.484
MA0030.1	MA0030.1	0.0421
MA0031.1	MA0031.1	0.0389
MA0035.2	MA0035.2	0.377
MA0038.1	MA0038.1	0.8
MA0039.2	MA0039.2	0.0151
MA0040.1	MA0040.1	0.0532
MA0041.1	MA0041.1	0.148
MA0042.1	MA0042.1	0.284
MA0043.1	MA0043.1	0.0578
MA0046.1	MA0046.1	6.52461e-18
MA0047.2	MA0047.2	0.0173
MA0048.1	MA0048.1	0.00235
MA0050.1	MA0050.1	2.84269e-4
MA0051.1	MA0051.1	0.00541
MA0052.1	MA0052.1	5.30868e-22
MA0055.1	MA0055.1	6.61484e-4
MA0057.1	MA0057.1	0.938
MA0058.1	MA0058.1	0.305
MA0059.1	MA0059.1	0.943
MA0060.1	MA0060.1	0.243
MA0061.1	MA0061.1	0.485
MA0062.2	MA0062.2	1.33677e-5
MA0065.2	MA0065.2	0.279
MA0066.1	MA0066.1	0.959
MA0067.1	MA0067.1	0.343
MA0068.1	MA0068.1	0.333
MA0069.1	MA0069.1	0.156
MA0070.1	MA0070.1	0.566
MA0071.1	MA0071.1	0.658
MA0072.1	MA0072.1	0.127
MA0073.1	MA0073.1	0.853
MA0074.1	MA0074.1	0.582
MA0076.1	MA0076.1	0.0149
MA0077.1	MA0077.1	0.647
MA0078.1	MA0078.1	0.49
MA0079.2	MA0079.2	0.228
MA0080.2	MA0080.2	0.00221
MA0081.1	MA0081.1	0.726
MA0083.1	MA0083.1	1.50926e-14
MA0084.1	MA0084.1	0.947
MA0087.1	MA0087.1	0.64
MA0088.1	MA0088.1	0.54
MA0090.1	MA0090.1	0.00296
MA0091.1	MA0091.1	0.472
MA0092.1	MA0092.1	0.76
MA0093.1	MA0093.1	0.234
MA0099.2	MA0099.2	1.38797e-7
MA0100.1	MA0100.1	0.562
MA0101.1	MA0101.1	0.116
MA0102.2	MA0102.2	0.0106
MA0103.1	MA0103.1	1.45106e-5
MA0104.2	MA0104.2	0.668
MA0105.1	MA0105.1	0.0726
MA0106.1	MA0106.1	0.638
MA0107.1	MA0107.1	0.109
MA0108.2	MA0108.2	0.892
MA0111.1	MA0111.1	0.525
MA0112.2	MA0112.2	0.0268
MA0113.1	MA0113.1	0.471
MA0114.1	MA0114.1	3.71219e-4
MA0115.1	MA0115.1	0.499
MA0116.1	MA0116.1	0.857
MA0117.1	MA0117.1	0.562
MA0119.1	MA0119.1	0.0305
MA0122.1	MA0122.1	0.998
MA0124.1	MA0124.1	0.319
MA0125.1	MA0125.1	0.596
MA0131.1	MA0131.1	0.396
MA0135.1	MA0135.1	0.0393
MA0136.1	MA0136.1	5.40156e-4
MA0137.2	MA0137.2	0.00984
MA0138.2	MA0138.2	0.481
MA0139.1	MA0139.1	0.52
MA0140.1	MA0140.1	0.154
MA0141.1	MA0141.1	8.13072e-6
MA0142.1	MA0142.1	0.269
MA0143.1	MA0143.1	0.905
MA0144.1	MA0144.1	0.21
MA0145.1	MA0145.1	0.217
MA0146.1	MA0146.1	0.894
MA0147.1	MA0147.1	0.618
MA0148.1	MA0148.1	0.0636
MA0149.1	MA0149.1	0.151
MA0150.1	MA0150.1	0.00162
MA0152.1	MA0152.1	0.624
MA0153.1	MA0153.1	2.47191e-11
MA0154.1	MA0154.1	0.249
MA0155.1	MA0155.1	0.239
MA0156.1	MA0156.1	1.90176e-7
MA0157.1	MA0157.1	0.163
MA0159.1	MA0159.1	0.0374
MA0160.1	MA0160.1	0.127
MA0162.1	MA0162.1	0.119
MA0163.1	MA0163.1	0.0805
MA0164.1	MA0164.1	0.421
MA0258.1	MA0258.1	0.478
MA0259.1	MA0259.1	0.256

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11021

Novel motif	Logo	P-value
1	1	0.515
10	10	0.615
100	100	0.839
101	101	0.914
102	102	0.695
103	103	0.835
104	104	0.988
105	105	0.677
106	106	0.793
107	107	0.692
108	108	0.964
109	109	0.501
11	11	0.704
110	110	0.0544
111	111	0.476
112	112	0.361
113	113	0.416
114	114	0.958
115	115	0.963
116	116	0.521
117	117	0.326
118	118	0.389
119	119	0.639
12	12	0.514
120	120	0.247
121	121	0.449
122	122	0.133
123	123	0.09
124	124	0.728
125	125	0.748
126	126	0.905
127	127	0.201
128	128	0.309
129	129	0.879
13	13	1.60022e-4
130	130	0.288
131	131	0.357
132	132	0.834
133	133	0.244
134	134	0.661
135	135	0.792
136	136	0.0247
137	137	0.576
138	138	0.14
139	139	0.88
14	14	0.89
140	140	0.337
141	141	0.732
142	142	0.698
143	143	0.559
144	144	0.0774
145	145	0.135
146	146	0.383
147	147	0.748
148	148	0.858
149	149	0.506
15	15	0.352
150	150	0.178
151	151	0.185
152	152	0.491
153	153	0.89
154	154	0.831
155	155	0.343
156	156	0.00799
157	157	0.705
158	158	0.498
159	159	0.0329
160	160	0.0725
161	161	0.561
162	162	0.603
163	163	0.804
164	164	0.598
165	165	0.163
166	166	0.454
167	167	0.925
168	168	0.49
169	169	0.00661
17	17	0.928
18	18	0.201
19	19	0.157
2	2	0.281
20	20	0.177
21	21	0.954
22	22	0.347
23	23	0.214
24	24	0.41
25	25	0.553
26	26	0.00838
27	27	0.21
28	28	0.22
29	29	0.482
3	3	0.683
30	30	0.0291
31	31	0.779
32	32	0.708
33	33	0.141
34	34	0.937
35	35	0.558
36	36	0.124
37	37	0.108
38	38	0.407
39	39	0.941
4	4	0.452
40	40	0.00322
41	41	0.789
42	42	0.779
43	43	0.57
44	44	0.788
45	45	0.038
46	46	0.744
47	47	0.986
48	48	0.954
49	49	0.379
5	5	0.47
50	50	0.31
51	51	0.85
52	52	0.922
53	53	0.446
54	54	0.665
55	55	0.152
56	56	0.882
57	57	0.186
58	58	0.653
59	59	0.232
6	6	0.137
60	60	0.96
61	61	0.629
62	62	0.497
63	63	0.539
64	64	0.731
65	65	0.344
66	66	0.434
67	67	0.625
68	68	0.455
69	69	0.47
7	7	0.232
70	70	0.101
71	71	0.0083
72	72	0.0883
73	73	0.644
74	74	0.395
75	75	0.796
76	76	0.501
77	77	0.728
78	78	0.379
79	79	0.591
8	8	0.699
80	80	0.0186
81	81	0.726
82	82	0.792
83	83	0.848
84	84	0.835
85	85	0.631
86	86	0.69
87	87	4.92412e-6
88	88	0.377
89	89	0.344
9	9	0.615
90	90	0.647
91	91	0.0974
92	92	0.883
93	93	0.331
94	94	0.152
95	95	0.658
96	96	0.352
97	97	0.161
98	98	0.549
99	99	0.712

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11021

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0011356 mouse heart- embryo E16 sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0007100 (primary circulatory organ)
0000948 (heart)
0000479 (tissue)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003103 (compound organ)
0010317 (germ layer / neural crest derived structure)
0004535 (cardiovascular system)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000101 (sample by species)
0000103 (mouse sample)
0000001 (sample)
0000999 (fetal tissue sample)
0000292 (embryonic day sample - mouse)
0000004 (tissue sample)
0000299 (mouse embryonic day 16 sample)
0011356 (mouse heart- embryo E16 sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0004872 (splanchnic layer of lateral plate mesoderm)
UBERON:0004140 (primary heart field)
UBERON:0010316 (germ layer / neural crest)
FF:0000294 (mouse embryonic day 11 sample)

@@ Line 1: / Line 1: @@
 {{f5samples
-|DRA_sample_Accession=CAGE@DRS008839
+|DRA_sample_Accession=CAGE@SAMD00005268
-|accession_numbers=CAGE;DRX008976;DRR009850;DRZ001275;DRZ002658
+|accession_numbers=CAGE;DRX008976;DRR009850;DRZ001275;DRZ002658;DRZ012625;DRZ014008
 |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0007100,UBERON:0000948,UBERON:0000479,UBERON:0010314,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003103,UBERON:0010317,UBERON:0004535,UBERON:0001009
 |ancestors_in_cell_lineage_facet=
@@ Line 9: / Line 9: @@
 |created_by=
 |creation_date=
-|datafreeze_phase=1
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr9:24578720..24578735,-!p1@Tbx20!2.39!246.36!Tbx20;;chr17:26978409..26978442,-!p1@Nkx2-5!1.96!89.47!Nkx2-5;;chr8:59799772..59799789,+!p1@Hand2!1.78!162.91!Hand2;;chr5:77543897..77543911,-!p2@Hopx!1.74!101.04!Hopx;;chr6:97879817..97879857,+!p2@Mitf!1.61!39.65!Mitf;;chr14:63864056..63864102,-!p1@Gata4!1.59!64.33!Gata4;;chr10:22539932..22539956,-!p1@Tcf21!1.31!51.53!Tcf21;;chr5:77544108..77544119,-!p7@Hopx!1.27!17.43!Hopx;;chr14:63890491..63890516,-!p2@Gata4!1.24!16.35!Gata4;;chr1:189821714..189821761,+!p1@Esrrg!1.22!28.85!Esrrg;;chr11:101755669..101755686,-!p1@Meox1!1.22!27.77!Meox1;;chr5:77544170..77544181,-!p6@Hopx!1.22!15.58!Hopx;;chr5:120285144..120285160,+!p1@Tbx5!1.21!15.27!Tbx5;;chr9:87626083..87626108,-!p1@Tbx18!1.19!31.93!Tbx18;;chr2:120365588..120365602,-!p2@Zfp106!1.19!24.07!Zfp106;;chr10:30562571..30562597,-!p1@Hey2!1.17!32.70!Hey2;;chr7:119885539..119885574,+!p3@Tead1!1.16!13.58!Tead1;;chr7:17647736..17647772,-!p1@Hif3a!1.14!45.66!Hif3a;;chr17:26978521..26978536,-!p2@Nkx2-5!1.10!11.57!Nkx2-5;;chr14:63890459..63890484,-!p4@Gata4!1.08!11.11!Gata4;;chr14:63890660..63890687,-!p7@Gata4!1.06!10.49!Gata4;;chr10:12810631..12810649,+!p1@Plagl1!1.05!271.05!Plagl1;;chr5:24107779..24107825,-!p1@Smarcd3!0.98!58.78!Smarcd3;;chr13:73397958..73397994,+!p1@Irx4!0.98!8.64!Irx4;;chr14:63890691..63890718,-!p8@Gata4!0.98!8.64!Gata4;;chr18:11052485..11052508,+!p2@Gata6!0.97!23.76!Gata6;;chr5:77543935..77543947,-!p4@Hopx!0.96!8.18!Hopx;;chr18:11052642..11052659,+!p1@Gata6!0.92!38.10!Gata6;;chr4:148178559..148178603,+!p1@Casz1!0.92!21.75!Casz1;;chr18:11052456..11052477,+!p3@Gata6!0.91!22.83!Gata6;;chr4:150482563..150482655,-!p2@Camta1!0.89!24.99!Camta1;;chr2:180069370..180069409,-!p1@Gata5!0.87!7.56!Gata5;;chr14:63890519..63890539,-!p3@Gata4!0.87!6.48!Gata4;;chr14:64562503..64562524,+!p1@Sox7!0.85!37.64!Sox7;;chr7:6649134..6649167,-!p1@Zim1!0.84!34.40!Zim1;;chr1:92895299..92895373,+!p2@Lrrfip1!0.83!126.19!Lrrfip1;;chr4:120488308..120488366,-!p1@Nfyc!0.83!35.64!Nfyc;;chr1:189432907..189432926,+!p3@Esrrg!0.83!5.71!Esrrg;;chr11:57645506..57645523,-!p1@Hand1!0.82!5.55!Hand1;;chr10:30562939..30562969,-!p5@Hey2!0.82!5.55!Hey2;;chr18:80909801..80909819,-!p1@Nfatc1!0.79!33.01!Nfatc1;;chr17:26978449..26978458,-!p3@Nkx2-5!0.77!4.94!Nkx2-5;;chr1:191994550..191994623,-!p1@Prox1!0.76!35.79!Prox1;;chr1:170362437..170362478,-!p5@Pbx1!0.75!15.58!Pbx1;;chr10:30562617..30562637,-!p2@Hey2!0.74!5.86!Hey2;;chr3:128917187..128917223,+!p2@Pitx2!0.74!5.40!Pitx2;;chr4:133109285..133109308,+!p1@Nr0b2!0.74!4.47!Nr0b2;;chr14:63890545..63890560,-!p5@Gata4!0.74!4.47!Gata4;;chr15:40486566..40486600,+!p1@Zfpm2!0.73!29.00!Zfpm2;;chr4:148178529..148178548,+!p3@Casz1!0.72!10.80!Casz1;;chr13:72766250..72766273,+!p1@Irx2!0.72!6.94!Irx2;;chr5:138187775..138187845,+!p7@Tsc22d4!0.72!6.02!Tsc22d4;;chr2:104966766..104966786,+!p1@Wt1!0.71!6.94!Wt1;;chr5:120285161..120285176,+!p2@Tbx5!0.71!4.17!Tbx5;;chr17:26978464..26978469,-!p4@Nkx2-5!0.70!4.01!Nkx2-5;;chr7:19946556..19946611,+!p1@Ppp1r13l!0.69!17.28!Ppp1r13l;;chr12:37835141..37835194,+!p1@Meox2!0.69!13.58!Meox2;;chr5:120285130..120285141,+!p3@Tbx5!0.69!3.86!Tbx5;;chr7:119822957..119822980,+!p2@Tead1!0.68!20.98!Tead1;;chr4:82151148..82151159,-!p5@Nfib!0.68!12.03!Nfib;;chr10:62327990..62328025,-!p2@Tet1!0.68!6.32!Tet1;;chr4:135129538..135129558,-!p1@Grhl3!0.68!6.02!Grhl3;;chr2:168415815..168415872,-!p1@Nfatc2!0.67!22.68!Nfatc2;;chr14:63864337..63864381,-!p6@Gata4!0.67!3.70!Gata4;;chr4:87452180..87452196,-!p3@Mllt3!0.65!7.56!Mllt3;;chr1:120879128..120879183,-!p3@Gli2!0.64!7.10!Gli2;;chr6:97879802..97879816,+!p5@Mitf!0.64!3.39!Mitf;;chr5:77524250..77524300,-!p1@Hopx!0.63!78.21!Hopx;;chr18:11052516..11052525,+!p5@Gata6!0.63!3.24!Gata6;;chr18:11052606..11052633,+!p4@Gata6!0.61!8.95!Gata6;;chr13:72766279..72766296,+!p2@Irx2!0.60!4.78!Irx2;;chr8:94325321..94325366,-!p1@Irx3!0.59!8.02!Irx3;;chr2:104966874..104966907,+!p2@Wt1!0.59!2.93!Wt1;;chr6:53523358..53523388,+!p1@Creb5!0.58!41.19!Creb5;;chr15:40486427..40486437,+!p5@Zfpm2!0.58!3.86!Zfpm2;;chr16:43363152..43363186,+!p3@Zbtb20!0.57!7.25!Zbtb20;;chrX:137135036..137135064,-!p4@Tsc22d3!0.57!6.02!Tsc22d3;;chr11:98789140..98789168,+!p5@Rara!0.57!4.78!Rara;;chr7:123174485..123174514,-!p6@Sox6!0.57!3.55!Sox6;;chr17:46693107..46693137,-!p1@Srf!0.56!31.62!Srf;;chr4:148275237..148275311,+!p2@Casz1!0.56!12.96!Casz1;;chr16:43503493..43503570,+!p9@Zbtb20!0.56!4.94!Zbtb20;;chr2:30700788..30700824,+!p2@Prrx2!0.56!4.47!Prrx2;;chr2:17976799..17976829,+!p5@Mllt10!0.56!3.39!Mllt10;;chr2:104966933..104966966,+!p3@Wt1!0.56!2.62!Wt1;;chrX:45245679..45245702,-!p1@Smarca1!0.55!14.04!Smarca1;;chr17:46693078..46693097,-!p3@Srf!0.55!12.50!Srf;;chr4:154010918..154010931,-!p1@Prdm16!0.55!8.95!Prdm16;;chr4:126703093..126703158,+!p3@Sfpq!0.55!8.64!Sfpq;;chr14:17407970..17408015,-!p2@Rarb!0.55!8.18!Rarb;;chr9:63869751..63869767,-!p1@Smad6!0.55!7.87!Smad6;;chr8:92872242..92872285,-!p1@Tox3!0.55!7.56!Tox3;;chr18:14130694..14130697,-!p2@Zfp521!0.55!6.94!Zfp521;;chr7:119822915..119822936,+!p5@Tead1!0.55!4.63!Tead1;;chr14:67853457..67853482,+!p2@Ebf2!0.55!3.86!Ebf2;;chr12:84828663..84828679,-!p1@Dpf3!0.54!23.91!Dpf3;;chrX:45245644..45245666,-!p2@Smarca1!0.54!9.56!Smarca1;;chr15:40486754..40486771,+!p2@Zfpm2!0.54!4.94!Zfpm2;;chr11:70043257..70043263,-!p1@Bcl6b!0.54!4.78!Bcl6b;;chr2:151969288..151969294,+!p1@Tcf15!0.54!4.17!Tcf15;;chr1:189432881..189432903,+!p2@Esrrg!0.54!2.47!Esrrg;;chr13:83663868..83663894,+!p2@Mef2c!0.53!43.81!Mef2c;;chr5:20387850..20387869,-!p1@Phtf2!0.53!31.01!Phtf2;;chr4:135840573..135840601,+!p1@Zfp46!0.53!24.07!Zfp46;;chr4:13712228..13712267,+!p3@Runx1t1!0.53!4.63!Runx1t1;;chr11:74981654..74981658,-!p1@Hic1!0.52!11.42!Hic1;;chr14:17407878..17407926,-!p1@Rarb!0.52!6.17!Rarb;;chr7:19946535..19946550,+!p3@Ppp1r13l!0.52!3.86!Ppp1r13l;;chr7:17642018..17642045,-!p4@Hif3a!0.52!2.78!Hif3a;;chr3:66785857..66785873,-!p1@Shox2!0.52!2.31!Shox2;;chr2:105003277..105003280,+!p5@Wt1!0.52!2.31!Wt1;;chr1:191993385..191993405,-!p3@Prox1!0.52!2.31!Prox1;;chr10:92773591..92773623,-!p1@Elk3!0.51!64.95!Elk3;;chr12:34642510..34642530,+!p1@Twist1!0.51!8.79!Twist1;;chr7:74517982..74518012,-!p2@Mef2a!0.51!4.78!Mef2a;;chr8:123640063..123640077,+!p1@Foxc2!0.51!4.63!Foxc2;;chr12:37835203..37835218,+!p3@Meox2!0.51!2.78!Meox2;;chr7:74517658..74517731,-!p1@Mef2a!0.50!129.12!Mef2a;;chr12:39506873..39506913,+!p1@Etv1!0.50!29.16!Etv1;;chr5:77524304..77524315,-!p5@Hopx!0.50!5.40!Hopx;;chr7:17642053..17642066,-!p2@Hif3a!0.50!3.39!Hif3a;;chr4:82151126..82151133,-!p8@Nfib!0.50!3.09!Nfib;;chr10:12844757..12844771,+!p2@Plagl1!0.50!2.16!Plagl1;;chr13:83663902..83663927,+!p1@Mef2c!0.49!67.72!Mef2c;;chr7:52471143..52471186,+!p1@Tead2!0.49!29.47!Tead2;;chr8:81552216..81552249,+!p3@Zfp827!0.49!7.40!Zfp827;;chr13:72101161..72101177,-!p2@Irx1!0.49!3.24!Irx1;;chr8:94325814..94325839,-!p2@Irx3!0.48!5.09!Irx3;;chr4:108151497..108151514,+!p3@Zcchc11!0.48!4.78!Zcchc11;;chr9:63869834..63869849,-!p5@Smad6!0.48!4.01!Smad6;;chr8:94325847..94325869,-!p3@Irx3!0.48!3.70!Irx3;;chrX:103070839..103070856,-!p4@Atrx!0.48!3.55!Atrx;;chr7:123174606..123174636,-!p5@Sox6!0.48!2.78!Sox6;;chr4:82151178..82151262,-!p1@Nfib!0.47!108.60!Nfib;;chr4:126700722..126700753,+!p4@Sfpq!0.47!5.86!Sfpq;;chr10:62328047..62328076,-!p3@Tet1!0.47!3.39!Tet1;;chr4:3865501..3865548,-!p1@Plag1!0.46!12.96!Plag1;;chrX:103070746..103070764,-!p5@Atrx!0.46!3.24!Atrx;;chr9:32443818..32443854,+!p2@Ets1!0.45!10.80!Ets1;;chr7:144506077..144506128,-!p1@Ebf3!0.45!5.25!Ebf3;;chr7:4947625..4947634,-!p6@Zfp579!0.45!3.55!Zfp579;;chr15:40486615..40486628,+!p3@Zfpm2!0.45!3.39!Zfpm2;;chr13:72101178..72101203,-!p1@Irx1!0.45!3.24!Irx1;;chr15:85566184..85566238,+!p1@Ppara!0.45!3.09!Ppara;;chr3:128916868..128916890,+!p1@Pitx2!0.45!2.78!Pitx2;;chr18:65741358..65741415,+!p1@Zfp532!0.44!10.34!Zfp532;;chr9:122812356..122812381,+!p@chr9:122812356..122812381,+!0.44!4.17!Gm8008;;chr2:30700881..30700916,+!p1@Prrx2!0.44!4.01!Prrx2;;chr16:95680889..95680991,-!p1@Erg!0.43!19.59!Erg;;chr1:193007123..193007139,-!p1@Atf3!0.43!12.96!Atf3;;chr9:63869890..63869908,-!p6@Smad6!0.43!2.47!Smad6;;chr9:87625998..87626007,-!p4@Tbx18!0.43!1.70!Tbx18;;chr1:189821700..189821713,+!p4@Esrrg!0.43!1.70!Esrrg;;chrX:58146612..58146615,-!p1@Sox3!0.43!1.70!Sox3;;chr3:98186461..98186476,+!p2@Zfp697!0.43!1.70!Zfp697;;chr13:73398004..73398017,+!p2@Irx4!0.43!1.70!Irx4;;chr6:37392095..37392154,-!p1@Creb3l2!0.42!74.51!Creb3l2;;chr4:97444012..97444045,+!p4@Nfia!0.42!17.43!Nfia;;chr6:53018700..53018759,-!p2@Jazf1!0.42!8.02!Jazf1;;chr16:43363190..43363242,+!p2@Zbtb20!0.42!6.63!Zbtb20;;chr6:99216488..99216534,-!p2@Foxp1!0.42!6.17!Foxp1;;chr4:126700650..126700678,+!p5@Sfpq!0.42!4.01!Sfpq;;chr18:14131045..14131062,-!p3@Zfp521!0.42!3.09!Zfp521;;chrX:103070960..103070973,-!p7@Atrx!0.42!2.47!Atrx;;chr15:40486883..40486903,+!p4@Zfpm2!0.42!2.47!Zfpm2;;chr2:181406327..181406350,-!p1@Sox18!0.41!72.04!Sox18;;chr4:82151274..82151290,-!p3@Nfib!0.41!37.18!Nfib;;chr19:10315179..10315241,-!p1@Gm98!0.41!23.60!Gm98;;chr18:55152206..55152251,-!p1@Zfp608!0.41!22.21!Zfp608;;chr4:120624269..120624302,-!p1@Zfp69!0.41!7.71!Zfp69;;chr18:55152179..55152194,-!p5@Zfp608!0.41!5.86!Zfp608;;chr9:96653072..96653154,-!p1@Zbtb38!0.41!5.55!Zbtb38;;chr9:96653241..96653288,-!p1@E030011O05Rik,p5@Zbtb38!0.41!3.70!Zbtb38;;chr11:18918820..18918831,-!p4@Meis1!0.41!3.70!Meis1;;chr12:37835120..37835133,+!p2@Meox2!0.41!2.62!Meox2;;chr13:73397921..73397935,+!p3@Irx4!0.41!1.54!Irx4;;chr9:87625971..87625992,-!p2@Tbx18!0.41!1.54!Tbx18;;chr6:53018556..53018650,-!p1@Jazf1!0.40!14.81!Jazf1;;chrX:132420488..132420517,+!p4@Bhlhb9!0.40!9.10!Bhlhb9;;chr17:23004042..23004077,-!p2@Zfp945!0.40!8.02!Zfp945;;chr9:63869802..63869815,-!p3@Smad6!0.40!3.86!Smad6;;chr8:92872177..92872201,-!p2@Tox3!0.40!3.24!Tox3;;chr4:13712168..13712218,+!p4@Runx1t1!0.40!3.09!Runx1t1;;chr13:31898767..31898785,+!p4@Foxc1!0.40!2.01!Foxc1;;chr9:111020795..111020816,+!p3@Lrrfip2!0.40!1.70!Lrrfip2;;chr18:14131126..14131211,-!p1@Zfp521!0.39!46.28!Zfp521;;chrX:132420442..132420482,+!p2@Bhlhb9!0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ux2;;chr2:44965788..44965815,-!p11@Zeb2!0.26!2.31!Zeb2;;chr11:44431710..44431725,+!p7@Ebf1!0.26!1.85!Ebf1;;chr9:106355684..106355744,+!p5@Pcbp4!0.26!1.70!Pcbp4;;chr4:135840623..135840632,+!p5@Zfp46!0.26!1.39!Zfp46;;chr7:119822892..119822901,+!p7@Tead1!0.26!1.39!Tead1;;chr5:77695390..77695414,+!p2@Rest!0.26!1.23!Rest;;chr7:25292246..25292259,+!p6@Zfp428!0.26!1.23!Zfp428;;chrX:66613569..66613586,+!p2@Aff2!0.26!1.23!Aff2;;chr4:135699731..135699747,+!p1@Id3!0.25!182.96!Id3;;chr13:96095213..96095255,+!p1@Zbed3!0.25!23.76!Zbed3;;chr7:24993112..24993158,-!p1@Zfp111!0.25!16.20!Zfp111;;chrX:132420399..132420436,+!p1@Bhlhb9!0.25!8.95!Bhlhb9;;chr6:131338363..131338383,-!p4@Csda!0.25!6.48!Csda;;chr2:91864300..91864379,-!p2@Creb3l1!0.25!3.86!Creb3l1;;chr4:13670499..13670526,+!p2@Runx1t1!0.25!2.78!Runx1t1;;chr12:9581284..9581303,+!p2@Osr1!0.25!2.31!Osr1;;chr4:45024818..45024846,-!p4@Zbtb5!0.25!2.16!Zbtb5;;chr5:134741947..134741948,-!p9@Gtf2i!0.25!1.70!Gtf2i;;chr1:9690474..9690493,-!p3@Mybl1!0.25!1.70!Mybl1;;chr8:124984566..124984595,-!p1@Snai3!0.25!1.70!Snai3;;chr19:55817590..55817625,+!p11@Tcf7l2!0.25!1.70!Tcf7l2;;chr2:152223586..152223604,-!p5@Sox12!0.25!1.54!Sox12;;chr15:85566014..85566045,+!p3@Ppara!0.25!1.39!Ppara;;chr4:154010228..154010244,-!p4@Prdm16!0.25!1.39!Prdm16;;chr8:94881872..94881887,+!p2@Irx5!0.25!0.93!Irx5;;chr8:94325779..94325791,-!p7@Irx3!0.25!0.77!Irx3;;chr8:87225806..87225809,+!p4@Lyl1!0.25!0.77!Lyl1;;chr19:45225149..45225186,+!p1@Tlx1!0.25!0.77!Tlx1;;chr2:105003138..105003155,+!p13@Wt1!0.25!0.77!Wt1;;chr2:30700830..30700843,+!p4@Prrx2!0.25!0.77!Prrx2;;chr2:180069423..180069434,-!p2@Gata5!0.25!0.77!Gata5;;chr12:87702380..87702394,+!p6@Esrrb!0.25!0.77!Esrrb;;chr12:39510206..39510249,+!p3@Etv1!0.25!0.77!Etv1;;chr3:66785201..66785226,-!p3@Shox2!0.25!0.77!Shox2;;chr4:148178459..148178482,+!p4@Casz1!0.25!0.77!Casz1;;chr4:82145196..82145229,-!p7@Nfib!0.25!0.77!Nfib;;chr3:29911808..29911833,-!p8@Mecom!0.25!0.77!Mecom;;chr4:87452236..87452249,-!p9@Mllt3!0.25!0.77!Mllt3;;chr11:90252108..90252134,-!p6@Hlf!0.25!0.77!Hlf;;chr4:118846783..118846826,-!p1@Zfp691!0.24!20.83!Zfp691;;chr12:25336211..25336274,+!p1@Klf11!0.24!15.58!Klf11;;chr3:8666963..8666978,-!p1@Hey1!0.24!9.56!Hey1;;chr15:76287876..76287894,+!p1@Scx!0.24!8.02!Scx;;chr9:106356243..106356264,+!p2@Pcbp4!0.24!6.17!Pcbp4;;chrX:132420525..132420558,+!p3@Bhlhb9!0.24!6.02!Bhlhb9;;chr4:82151622..82151643,-!p4@Nfib!0.24!5.71!Nfib;;chr18:69505414..69505465,+!p6@Tcf4!0.24!5.09!Tcf4;;chr13:99954640..99954681,+!p1@Zfp366!0.24!4.94!Zfp366;;chr9:65675474..65675503,-!p3@Zfp609!0.24!4.01!Zfp609;;chr2:17986419..17986443,+!p3@Mllt10!0.24!3.39!Mllt10;;chr13:56804865..56804898,+!p3@Smad5!0.24!3.39!Smad5;;chr4:97444280..97444291,+!p10@Nfia!0.24!2.93!Nfia;;chr7:134550321..134550345,-!p2@Zfp764!0.24!2.78!Zfp764;;chr18:75979866..75979890,+!p3@Zbtb7c!0.24!2.47!Zbtb7c;;chr4:126700576..126700598,+!p7@Sfpq!0.24!2.16!Sfpq;;chr11:44430989..44431015,+!p4@Ebf1!0.24!2.01!Ebf1;;chr11:90250944..90250982,-!p2@Hlf!0.24!1.85!Hlf;;chr8:87324311..87324316,-!p8@Nfix!0.24!1.70!Nfix;;chr16:30065394..30065398,+!p3@Hes1!0.24!1.39!Hes1;;chr4:114729646..114729665,+!p4@Tal1!0.24!1.39!Tal1;;chr2:120365219..120365232,-!p4@Zfp106!0.24!1.39!Zfp106;;chr1:165243653..165243664,-!p4@Prrx1!0.24!1.39!Prrx1;;chr1:4486453..4486470,-!p3@Sox17!0.24!1.23!Sox17;;chr1:165243272..165243283,-!p6@Prrx1!0.24!1.08!Prrx1;;chr9:63869705..63869713,-!p8@Smad6!0.24!1.08!Smad6;;chr7:89137163..89137200,-!p1@Bnc1!0.24!1.08!Bnc1;;chr11:101646155..101646170,-!p3@Etv4!0.24!1.08!Etv4;;chr7:144505980..144506010,-!p3@Ebf3!0.24!1.08!Ebf3;;chr4:150503457..150503498,-!p3@Camta1!0.24!0.93!Camta1;;chr10:80813134..80813211,-!p1@Hmg20b!0.23!28.08!Hmg20b;;chr17:35653725..35653780,-!p1@Tcf19!0.23!25.30!Tcf19;;chr17:23004085..23004108,-!p1@Zfp945!0.23!14.35!Zfp945;;chr3:94176733..94176794,+!p1@Rorc!0.23!11.26!Rorc;;chrX:131543731..131543764,-!p1@Zmat1!0.23!10.49!Zmat1;;chr5:34163023..34163090,+!p2@Whsc1!0.23!9.26!Whsc1;;chr2:77357622..77357704,-!p1@Zfp385b!0.23!3.39!Zfp385b;;chr10:80870405..80870428,-!p4@Nfic!0.23!3.39!Nfic;;chr1:170362322..170362333,-!p8@Pbx1!0.23!3.24!Pbx1;;chr5:134790326..134790343,-!p8@Gtf2i!0.23!2.93!Gtf2i;;chr7:130644017..130644092,-!p1@Zkscan2!0.23!2.16!Zkscan2;;chr4:54957886..54957907,+!p3@Zfp462!0.23!1.85!Zfp462;;chr3:51081392..51081407,-!p8@Elf2!0.23!1.70!Elf2;;chr11:69749320..69749345,+!p2@Ybx2!0.23!1.70!Ybx2;;chr4:13670626..13670657,+!p5@Runx1t1!0.23!1.54!Runx1t1;;chr8:87237711..87237727,-!p11@Nfix!0.23!1.23!Nfix;;chr2:152223762..152223777,-!p8@Sox12!0.23!0.93!Sox12;;chr13:29045559..29045574,-!p1@Sox4!0.22!123.57!Sox4;;chr7:6683123..6683142,-!p1@Peg3!0.22!78.06!Peg3;;chr3:100773567..100773599,-!p1@Ttf2!0.22!16.04!Ttf2;;chr9:121669118..121669179,+!p1@Zfp651!0.22!15.58!Zfp651;;chrX:98449492..98449510,+!p1@Foxo4!0.22!14.96!Foxo4;;chr2:154395581..154395610,-!p1@E2f1!0.22!14.66!E2f1;;chr7:30691106..30691156,-!p1@Zfp27!0.22!12.80!Zfp27;;chr17:35031460..35031518,+!p1@Zbtb12!0.22!6.94!Zbtb12;;chr6:65728988..65729056,+!p1@Prdm5!0.22!6.63!Prdm5;;chrX:53599567..53599592,+!p1@Zfp449!0.22!5.55!Zfp449;;chr5:138186979..138187025,+!p4@Tsc22d4!0.22!4.78!Tsc22d4;;chrX:98449898..98449913,+!p2@Foxo4!0.22!4.01!Foxo4;;chr10:114821393..114821431,-!p5@Thap2!0.22!3.39!Thap2;;chr4:97444616..97444631,+!p7@Nfia!0.22!3.39!Nfia;;chr11:5761871..5761882,+!p3@Aebp1!0.22!3.09!Aebp1;;chr11:85646263..85646278,+!p2@Tbx2!0.22!3.09!Tbx2;;chr5:77524231..77524245,-!p3@Hopx!0.22!2.93!Hopx;;chr4:118846454..118846506,-!p2@Zfp691!0.22!2.62!Zfp691;;chr2:34227446..34227511,-!p1@Pbx3!0.22!2.62!Pbx3;;chr11:98602203..98602266,+!p4@Thra!0.22!1.54!Thra;;chr2:115891680..115891701,-!p12@Meis2!0.22!1.08!Meis2;;chrX:137077699..137077705,-!p8@Tsc22d3!0.22!1.08!Tsc22d3;;chr8:79423672..79423727,+!p2@Nr3c2!0.22!1.08!Nr3c2;;chr3:19957878..19957885,+!p2@Hltf!0.22!1.08!Hltf;;chr6:145813964..145813994,-!p3@Bhlhe41!0.22!1.08!Bhlhe41;;chr5:20387890..20387893,-!p3@Phtf2!0.22!1.08!Phtf2;;chr7:123177377..123177409,-!p7@Sox6!0.22!1.08!Sox6;;chr4:154011072..154011095,-!p6@Prdm16!0.22!0.93!Prdm16;;chr8:90328310..90328362,-!p3@Zfp423!0.22!0.93!Zfp423;;chr16:43510301..43510313,+!p24@Zbtb20!0.22!0.93!Zbtb20;;chr18:53623836..53623839,+!p1@Prdm6!0.22!0.93!Prdm6;;chrX:137077134..137077143,-!p10@Tsc22d3!0.22!0.77!Tsc22d3;;chr12:75008961..75009002,+!p1@Hif1a!0.21!89.01!Hif1a;;chr11:72990702..72990737,+!p1@LOC100047518,p1@Tax1bp3!0.21!13.42!Tax1bp3;;chr19:26822880..26822964,+!p2@Smarca2!0.21!11.88!Smarca2;;chr8:72662966..72662991,-!p3@LOC100048268,p3@Rfxank!0.21!4.47!Rfxank;;chr15:75447162..75447217,+!p2@Zfp41!0.21!3.55!Zfp41;;chr1:162836606..162836631,+!p2@Rc3h1!0.21!3.24!Rc3h1;;chr13:15555670..15555771,+!p2@Gli3!0.21!2.93!Gli3;;chr1:170361826..170361844,-!p9@Pbx1!0.21!2.47!Pbx1;;chr7:74517732..74517743,-!p4@Mef2a!0.21!2.01!Mef2a;;chr6:128312772..128312792,+!p2@Foxm1!0.21!1.70!Foxm1;;chr2:91864449..91864492,-!p3@Creb3l1!0.21!1.54!Creb3l1;;chr1:165243379..165243402,-!p3@Prrx1!0.21!1.39!Prrx1;;chr12:9581317..9581333,+!p3@Osr1!0.21!1.39!Osr1;;chr14:17407549..17407575,-!p3@Rarb!0.21!1.39!Rarb;;chr13:64254572..64254585,-!p6@Zfp367!0.21!1.23!Zfp367;;chr1:14746065..14746079,-!p1@Msc!0.21!0.93!Msc;;chr16:43503594..43503634,+!p15@Zbtb20!0.21!0.93!Zbtb20;;chr4:13670441..13670463,+!p8@Runx1t1!0.21!0.93!Runx1t1;;chr4:154010334..154010347,-!p8@Prdm16!0.21!0.93!Prdm16;;chr7:123182248..123182264,-!p3@Sox6!0.21!0.93!Sox6;;chr6:14851377..14851396,+!p10@Foxp2!0.21!0.62!Foxp2;;chr7:108966820..108966835,+!p1@Phox2a!0.21!0.62!Phox2a;;chr19:55967419..55967424,+!p19@Tcf7l2!0.21!0.62!Tcf7l2;;chr16:43364012..43364030,+!p22@Zbtb20!0.21!0.62!Zbtb20;;chr18:14130594..14130600,-!p7@Zfp521!0.21!0.62!Zfp521;;chr12:77278238..77278252,-!p1@Esr2!0.21!0.62!Esr2;;chr13:53568191..53568219,-!p2@Msx2!0.21!0.62!Msx2;;chr12:37835219..37835230,+!p5@Meox2!0.21!0.62!Meox2;;chr1:92950128..92950139,+!p4@Lrrfip1!0.21!0.62!Lrrfip1;;chr2:30701003..30701028,+!p6@Prrx2!0.21!0.62!Prrx2;;chr3:29911947..29911958,-!p14@Mecom!0.21!0.62!Mecom;;chr4:154010313..154010324,-!p9@Prdm16!0.21!0.62!Prdm16;;chr4:150503544..150503561,-!p8@Camta1!0.21!0.62!Camta1;;chr11:90250999..90251013,-!p8@Hlf!0.21!0.62!Hlf;;chr11:57645586..57645597,-!p2@Hand1!0.21!0.62!Hand1;;chr10:30375665..30375674,-!p11@Ncoa7!0.21!0.62!Ncoa7;;chr7:52960888..52960902,+!p7@Dbp!0.21!0.62!Dbp;;chr13:23461025..23461086,-!p1@Zfp322a!0.20!33.48!Zfp322a;;chr13:53076396..53076452,-!p1@Nfil3!0.20!25.30!Nfil3;;chr9:19426523..19426584,+!p1@Zfp317!0.20!20.67!Zfp317;;chr9:71743854..71743909,-!p1@Tcf12!0.20!10.80!Tcf12;;chr10:126726055..126726091,-!p2@Mbd6!0.20!10.80!Mbd6;;chr10:79862134..79862173,-!p3@Mbd3!0.20!10.64!Mbd3;;chr4:49534086..49534168,+!p1@Zfp189!0.20!9.87!Zfp189;;chr9:96159665..96159680,+!p3@Tfdp2!0.20!5.86!Tfdp2;;chr6:97757008..97757061,+!p1@Mitf!0.20!5.40!Mitf;;chr18:5334362..5334408,-!p1@Zfp438!0.20!5.40!Zfp438;;chr15:79177964..79177986,+!p1@Maff!0.20!4.17!Maff;;chr13:67830046..67830082,-!p2@Zfp71-rs1!0.20!3.39!Zfp71-rs1;;chr7:4990015..4990028,-!p2@Zfp784!0.20!3.24!Zfp784;;chr12:3807001..3807016,+!p5@Dnmt3a!0.20!2.78!Dnmt3a;;chr10:119913546..119913583,-!p3@Hmga2!0.20!2.16!Hmga2;;chr13:96095097..96095114,+!p5@Zbed3!0.20!1.70!Zbed3;;chr17:27693865..27693877,+!p8@Hmga1-rs1,p9@Hmga1!0.20!1.54!Hmga1;;chr4:122911056..122911065,+!p2@Heyl!0.20!1.39!Heyl;;chr3:54559550..54559570,+!p4@Smad9!0.20!1.23!Smad9;;chr17:46692970..46692977,-!p5@Srf!0.20!1.08!Srf;;chr8:123640090..123640101,+!p2@Foxc2!0.20!0.77!Foxc2;;chr3:29912058..29912071,-!p6@Mecom!0.20!0.77!Mecom;;chr3:29912079..29912096,-!p10@Mecom!0.20!0.77!Mecom;;chr9:32503590..32503680,+!p1@Ets1!0.19!50.91!Ets1;;chr17:87153240..87153254,+!p1@Epas1!0.19!27.15!Epas1;;chr10:110182489..110182589,+!p1@E2f7!0.19!16.04!E2f7;;chr8:109620410..109620462,-!p1@Terf2!0.19!12.65!Terf2;;chr4:97439116..97439202,+!p5@Nfia!0.19!11.72!Nfia;;chr10:119913310..119913366,-!p1@Hmga2!0.19!10.18!Hmga2;;chr4:94718861..94718872,-!p2@Jun!0.19!9.87!Jun;;chr7:11080671..11080750,-!p1@Zik1!0.19!9.10!Zik1;;chr7:30906934..30907020,+!p1@Zfp382!0.19!8.64!Zfp382;;chr6:133985657..133985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@@ Line 44: / Line 45: @@
 |is_obsolete=
 |library_id=CNhs11021
-|library_ids=CNhs11021
+|library_id_phase_based=2:CNhs11021
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/mouse#cage;sample;457
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/mouse#cage;sample;457
+|mm10bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/heart%252c%2520embryo%2520E16.CNhs11021.457-17C6.mm10.nobarcode.bam
+|mm10ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/heart%252c%2520embryo%2520E16.CNhs11021.457-17C6.mm10.nobarcode.ctss.bed.gz
+|mm9bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/heart%252c%2520embryo%2520E16.CNhs11021.457-17C6.mm9.nobarcode.bam
+|mm9ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/heart%252c%2520embryo%2520E16.CNhs11021.457-17C6.mm9.ctss.bed.gz
+|mm9fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/heart%252c%2520embryo%2520E16.CNhs11021.457-17C6.mm9.nobarcode.rdna.fa.gz
 |name=heart, embryo E16
 |namespace=FANTOM5
@@ Line 50: / Line 60: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs11021,LSID731,release008,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
 |repeat_enrich_byfamily=0.056759294772502,0,0,0,0,0.0311531610083686,1.42119226140459,0,0,0,0,1.17390641494011,0,0,0,0,0,0,0.367119948942525,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179861870229231,0,0,0,0.0623063220167371,0.00935011948921272,0.0759150449619827,0.00757721710648473,0.0976471908178473,0.420181057843756,0.30725627300895,0,0,0,0,0,0,0,0,0,0,0.248300842374931,0,0.411907206284369,0,0,0,0,0,0,0.0583925432245655,0.0623063220167371,0.0623063220167371,0.0386109461203189,0.160201223224619,0.0674571354162389,0.24719914903984,0.128592640107841,0,0.165185349104694,0,-0.0481097483815471,0.208728404260772,0,0.0245044044042314,-0.173291008513529,-0.165043879252244,0.0379534916092237,0,0,0,0,0,0,0,0.19296349436112,-0.0231554595495925,0.040177691019991,0,0,0,0.0623063220167371
@@ Line 87: / Line 97: @@
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 |xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_mouse;search_select_hide=table111:457-17C6;search_select_hide=table117:457-17C6
 }}

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FF:457-17C6: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 19:16, 4 June 2020

CNhs11021

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0