FFCP PHASE2:Hg19::chr16:51185544..51185555,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:6299 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:10524 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6299 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=10524 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9NSC2 | ||
|association_with_transcript=-361bp_to_NM_002968,uc010cbv.2,uc010vgs.1_5end | |association_with_transcript=-361bp_to_NM_002968,uc010cbv.2,uc010vgs.1_5end | ||
|cluster_id=chr16:51185544..51185555,- | |cluster_id=chr16:51185544..51185555,- | ||
Latest revision as of 21:40, 16 September 2015
| Short description: | p7@SALL1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_7_at_SALL1_5end |
| Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
| Association with transcript: | -361bp_to_NM_002968, uc010cbv.2, uc010vgs.1_5end |
| EntrezGene: | SALL1 |
| HGNC: | 10524 |
| UniProt: | Q9NSC2 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p7@SALL1 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| embryonic stem cell | 3.84e-31 | 5 |
| serous secreting cell | 1.15e-07 | 1 |
| multinucleate cell | 1.22e-07 | 1 |
| myotube | 1.22e-07 | 1 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| regional part of diencephalon | 2.59e-15 | 4 |
| pineal body | 1.82e-14 | 2 |
| regional part of epithalamus | 1.82e-14 | 2 |
| secretory circumventricular organ | 1.82e-14 | 2 |
| circumventricular organ | 1.82e-14 | 2 |
| epithalamus | 1.82e-14 | 2 |
| multi cell component structure | 4.54e-14 | 2 |
| neuron projection bundle | 4.54e-14 | 2 |
| diencephalon | 5.87e-09 | 7 |
| future diencephalon | 5.87e-09 | 7 |
Showing 1 to 10 of 36 entries
| Ontology term | p-value | n |
|---|---|---|
| ovary epithelial cancer | 1.15e-07 | 1 |
Showing 1 to 1 of 1 entries
