FFCP PHASE2:Mm9::chr2:32986085..32986140,-: Difference between revisions
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=99326 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=797 | |MCL_coexpression_id=797 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=A2AUQ6 | ||
|association_with_transcript=0bp_to_ENSMUST00000124000_5end | |association_with_transcript=0bp_to_ENSMUST00000124000_5end | ||
|cluster_id=chr2:32986085..32986140,- | |cluster_id=chr2:32986085..32986140,- | ||
Latest revision as of 15:01, 26 September 2015
| Short description: | p1@Garnl3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Garnl3_5end |
| Coexpression cluster: | MCL_coexpression_mm9:797 |
| Association with transcript: | 0bp_to_ENSMUST00000124000_5end |
| EntrezGene: | Garnl3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@Garnl3 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| electrically responsive cell | 6.74e-13 | 39 |
| electrically active cell | 6.74e-13 | 39 |
| ectodermal cell | 3.64e-12 | 44 |
| neurectodermal cell | 3.64e-12 | 44 |
| neuron | 4.36e-12 | 33 |
| neuronal stem cell | 4.36e-12 | 33 |
| neuroblast | 4.36e-12 | 33 |
| electrically signaling cell | 4.36e-12 | 33 |
| neural cell | 4.43e-12 | 43 |
| CNS neuron (sensu Vertebrata) | 9.99e-08 | 23 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| nervous system | 9.76e-23 | 75 |
| central nervous system | 1.56e-22 | 73 |
| ectoderm-derived structure | 5.81e-18 | 95 |
| ectoderm | 5.81e-18 | 95 |
| presumptive ectoderm | 5.81e-18 | 95 |
| regional part of nervous system | 4.72e-16 | 54 |
| structure with developmental contribution from neural crest | 2.26e-15 | 92 |
| neurectoderm | 4.24e-15 | 64 |
| neural plate | 4.24e-15 | 64 |
| presumptive neural plate | 4.24e-15 | 64 |
Showing 1 to 10 of 37 entries
