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FFCP PHASE1:Mm9::chr6:34730412..34730467,+: Difference between revisions

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(Created page with "{{FFCP |id=chr6:34730412..34730467,+ |short_description=p1@Agbl3 |description=CAGE_peak_1_at_Agbl3_5end |association_with_transcript=0bp_to_ENSMUST00000115016,ENSMUST00000...")
 
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{{FFCP
{{FFCP
|id=chr6:34730412..34730467,+
|DHSsupport=NA
|short_description=p1@Agbl3
|DPIdataset=NA
|description=CAGE_peak_1_at_Agbl3_5end
|association_with_transcript=0bp_to_ENSMUST00000115016,ENSMUST00000115017,ENSMUST00000135304,ENSMUST00000143474,NM_178630,uc009bhm.1,uc009bhn.1,uc009bho.1,uc009bhp.1,uc009bhq.1,uc009bhr.1,uc009bhs.1,uc012eju.1_5end
|EntrezGene=76223
|EntrezGene=76223
|HGNC=
|HGNC=
|MCL_coexpression_id=463
|TSSclassifier=NA
|UniProt=Q8CDP0,D6RI59
|UniProt=Q8CDP0,D6RI59
|association_with_transcript=0bp_to_ENSMUST00000115016,ENSMUST00000115017,ENSMUST00000135304,ENSMUST00000143474,NM_178630,uc009bhm.1,uc009bhn.1,uc009bho.1,uc009bhp.1,uc009bhq.1,uc009bhr.1,uc009bhs.1,uc012eju.1_5end
|cluster_id=chr6:34730412..34730467,+
|description=CAGE_peak_1_at_Agbl3_5end
|id=chr6:34730412..34730467,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!2.24e-11!63;UBERON:0002346!7.58e-11!71;UBERON:0003075!7.58e-11!71;UBERON:0007284!7.58e-11!71;UBERON:0003056!3.58e-10!49;UBERON:0004121!4.03e-09!102;UBERON:0000924!4.03e-09!102;UBERON:0006601!4.03e-09!102;UBERON:0000475!2.71e-08!200;UBERON:0001017!2.86e-08!73;UBERON:0005743!2.86e-08!73;UBERON:0000479!3.14e-08!349;UBERON:0004111!4.67e-08!122;UBERON:0001049!5.80e-08!52;UBERON:0005068!5.80e-08!52;UBERON:0006241!5.80e-08!52;UBERON:0007135!5.80e-08!52;UBERON:0000025!9.77e-08!114;UBERON:0000153!9.91e-08!94;UBERON:0000955!1.18e-07!50;UBERON:0006238!1.18e-07!50;UBERON:0007811!1.25e-07!86;UBERON:0000073!1.87e-07!75;UBERON:0001016!1.87e-07!75;UBERON:0002616!3.05e-07!49;UBERON:0000468!4.08e-07!333;UBERON:0003080!5.37e-07!40
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.98e-10,64;UBERON:0003075,2.98e-10,64;UBERON:0007284,2.98e-10,64;UBERON:0003056,3.56e-10,49;UBERON:0010371,3.40e-09,73;UBERON:0010314,1.26e-08,92;UBERON:0004121,2.01e-08,95;UBERON:0000924,2.01e-08,95;UBERON:0006601,2.01e-08,95;UBERON:0000479,2.55e-08,349;UBERON:0001017,2.84e-08,73;UBERON:0004111,4.64e-08,122;UBERON:0001049,5.77e-08,52;UBERON:0005068,5.77e-08,52;UBERON:0006241,5.77e-08,52;UBERON:0007135,5.77e-08,52;UBERON:0000955,6.32e-08,47;UBERON:0006238,6.32e-08,47;UBERON:0000073,9.15e-08,54;UBERON:0000025,9.72e-08,114;UBERON:0002616,1.68e-07,46;UBERON:0001016,1.86e-07,75;UBERON:0003080,5.34e-07,40
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.36431609085087,4.71160695571253,1.8146096260851,5.59205381778233,44.531742156051,4.33597983527538,6.28742263736971,7.19469396872976,5.68303223302017,6.25137664315879,10.6795087167636,8.07267186032491,12.3734026422339,34.7881133989449,38.3079908322961,6.63623353319174,4.25722952109345,4.82741498674688,4.93699127315621,9.13036147904155,3.77494574084403,8.17329056735788,6.4983391956814,7.57248374611107,8.99240318528998,8.67105192176829,6.62713589030316,7.02346443974405,10.0514135876149,4.98806843953465,1.77588762699252,0.62799699626633,0.671538465456314,6.95482538515886,2.81523713176773,4.94509385521616,4.93047271881851,7.02200945649509,6.7770221114048,6.44455331110048,7.44764167471216,8.59265911718438,7.53590771747707,9.06472676867641,9.45031500324528,5.85417564191487,5.43770890781046,6.73088405277366,3.52876981786201,4.38927360741134,8.36594668195257,7.05009479498053,6.70762120409543,6.25067928730048,8.22312892865976,7.62329711783909,9.30665707816264,9.34979683526051,6.59046179714623,9.05406438653166,7.77224512000024,6.91471645972588,8.32814299856392,10.4784612082276,7.76424983830532,8.10218725947561,7.82963211526283,8.24313952752625,9.94320831917705,4.96932257246145,7.39152188836695,7.55801366488108,8.84628175904108,9.13837765230106,8.78054269789308,6.31367307450823,6.92600980613895,6.17256498823512,6.76219603307793,8.76689893142515,5.72923460437565,8.98633678878603,9.06661071611365,9.99242311751784,7.48581147025307,7.73535794573874,7.84282161482258,3.30887128679273,7.41977073985349
|phase1_expression=19.5381593467849,1.04692622291808,0.454999239389536,0,0,2.68606835059024,0.700837921786577,2.1950964985068,2.81577444303333,3.5109678948299,0.856089841127525,2.31339261086476,2.73921167889929,2.88487327982691,2.33176833270964,3.03712901084739,6.99561878128147,3.94327706697797,3.83920414096069,3.39511721438424,15.5629220976458,3.97163804803541,3.13439746966722,1.91990907352088,2.2940928106717,1.72269589234506,0.86152399231815,0.861884930743556,0.950117097281869,0.504060259519861,1.99557459589774,6.98533740805594,6.1506478758457,0,1.73310971850765,1.66234645358492,2.6542016314108,0.837063261473815,1.5626706890476,0,0,0.683045484958446,0.971020706062307,6.6725313527056,5.37297735463427,3.67093504323363,14.0830441982647,7.41285531693518,8.5677611266444,8.36048566019419,6.01941612989059,5.75010257459886,1.51004345451963,0.725362142011344,1.00828139742739,1.54355661621568,4.01146815914259,1.54701627683233,9.3065571995415,11.6378015439847,7.60597684207415,2.71075625655306,2.66788438833342,2.6996991518442,1.97773272513395,1.4209602298922,4.79360176829448,8.83702102239575,5.39185984004084,7.83034442323806,8.62332341540666,6.56997264128748,7.06779331045163,5.51208596467293,5.75072826109418,5.51531271966013,6.60695285996332,5.49055553766307,7.0659005297872,9.36392642884376,10.6125666578795,10.939180781692,5.30447698102624,8.4414391504752,7.94550888439413,8.2496003932627,8.68467252874528,7.45597783301202,2.34751199332871,3.09843396437821,7.24661221754194,3.44169550792555,2.719885334831,3.77792234146472,4.54843492213368,7.6164570806547,3.23022166303029,7.32850387085648,7.53379413348319,10.6001872353102,17.4645840523084,7.69958864485907,0,0,2.81438353314578,3.54703811665138,2.02209778005913,5.93756174539112,4.40194402200192,8.01587550950054,4.3371331691534,7.30717147949139,7.37969591219387,7.08396410597326,9.7598626922635,8.16832843642891,2.96633961281249,7.22996784599558,7.07688441559899,5.17653919831709,4.41683036920787,4.84875253135222,5.59175283654366,10.5401086924157,7.12118803165747,0.766371165625774,2.27648736561249,2.39961092397363,1.90605340609597,9.8861822007183,8.23501085073528,11.4345460422707,6.95297280769106,7.67146371990992,8.3115217823824,7.62533936418461,11.2023300235348,6.59356944233493,8.08712826987759,8.41767423545896,7.54698569183682,9.19608417733892,7.20248519221397,11.4535661555143,18.0296722751019,15.373646434182,15.9292931751539,14.2286853906459,4.74249584452253,6.61871280587367,8.09375171154165,4.60311038097907,11.1218899690239,8.00979983000983,7.20237477427802,12.7381930763836,0.702213187313235,2.05878325691772,0.852490498186778,3.52113813310353,5.8631514995274,6.66229627405755,7.33908680314152,6.68998387941173,6.17068451549513,3.95307706075693,5.90201483079162,8.17357396570186,7.40519324610662,6.56669856316381,6.89084881139774,3.94739966048397,4.39100230582101,5.36825675041487,6.72927835405207,13.6863134464448,0.660837565967596,0.793351699990633,6.82522401712749,6.50262681209228,3.47942145569652,4.23535401709019,4.89231696458715,4.37518940058886,0.474529061544512,1.97638745668813,3.77002813200404,5.37182474511107,6.43381487493096,0.898819408654221,1.29682829924817,0.995706366271836,3.79335801906163,6.16941968092536,9.01661885384643,6.10953983535943,6.59438456369928,9.60860732497364,17.8959400061648,16.2371162777562,13.5018905943582,14.4374681788507,4.44678940630723,5.83957870006329,3.73462090715086,3.82265591054251,5.68008339887808,6.51178331331525,3.56476192493988,6.32931502391783,6.16113861745134,7.13859674289012,14.3768206527355,10.0478055870496,13.4176199439261,7.32478746046624,3.58794827043824,7.71909634181387,8.49864674766381,5.87423376488503,5.37784422258685,8.65699937453459,11.7345124144251,11.3904255060435,9.99783291721258,10.7323506321789,12.7684466726015,13.2878813789265,12.5969267239415,8.84861899464985,7.42545422023351,9.40218880779825,3.01582567878545,3.26343410291226,5.4094070032094,3.58717770196152,6.10092241953609,5.04010252346474,2.13115428989678,3.7870639080656,4.41711507182759,4.68526493155966,5.81643173878557,6.69112634267146,7.12955757063661,8.49229592366497,3.64329631507405,7.3063964477828,5.53402889125133,12.2102100240287,11.4971469018698,8.72521457969551,16.4515828947112,8.90838664051691,5.30980553359851,8.01176099311439,9.06970670894253,5.46954731292105,3.54362271456927,8.30074899448604,5.16856586336442,9.81541069589265,9.9819265947722,4.10847785316561,2.10837217149998,4.12542172992747,22.1285743739962,7.38250485528372,6.33857550535497,10.7168517515796,14.5418991586664,15.8748247665843,13.657568709976,11.2652031172402,1.87737366450968,5.08396970073168,4.6310963591542,3.62749756471256,6.29711264114032,5.1869115438214,4.8942661041286,3.61109979439135,3.49777003955821,6.67531087237835,4.10090113914846,5.36605856704379,6.85219751267933,5.27431679613135,4.23752105935178,3.20289442489132,2.20971958992012,1.39951452323658,1.79659965945751,4.77335309007557,7.11755985557555,8.3360981522008,5.50827238191186,5.85447228840512,5.02233896616208,6.47348862647139,6.36431609085087,4.71160695571253,1.8146096260851,5.59205381778233,44.531742156051,4.33597983527538,6.28742263736971,7.19469396872976,5.68303223302017,6.25137664315879,10.6795087167636,8.07267186032491,12.3734026422339,34.7881133989449,38.3079908322961,6.63623353319174,4.25722952109345,4.82741498674688,4.93699127315621,9.13036147904155,3.77494574084403,8.17329056735788,6.4983391956814,7.57248374611107,8.99240318528998,8.67105192176829,6.62713589030316,7.02346443974405,10.0514135876149,4.98806843953465,1.77588762699252,0.62799699626633,0.671538465456314,6.95482538515886,2.81523713176773,4.94509385521616,4.93047271881851,7.02200945649509,6.7770221114048,6.44455331110048,7.44764167471216,8.59265911718438,7.53590771747707,9.06472676867641,9.45031500324528,5.85417564191487,5.43770890781046,6.73088405277366,3.52876981786201,4.38927360741134,8.36594668195257,7.05009479498053,6.70762120409543,6.25067928730048,8.22312892865976,7.62329711783909,9.30665707816264,9.34979683526051,6.59046179714623,9.05406438653166,7.77224512000024,6.91471645972588,8.32814299856392,10.4784612082276,7.76424983830532,8.10218725947561,7.82963211526283,8.24313952752625,9.94320831917705,4.96932257246145,7.39152188836695,7.55801366488108,8.84628175904108,9.13837765230106,8.78054269789308,6.31367307450823,6.92600980613895,6.17256498823512,6.76219603307793,8.76689893142515,5.72923460437565,8.98633678878603,9.06661071611365,9.99242311751784,7.48581147025307,7.73535794573874,7.84282161482258,3.30887128679273,7.41977073985349
|short_description=p1@Agbl3
}}
}}

Latest revision as of 02:30, 27 September 2015

Short description:p1@Agbl3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Agbl3_5end
Coexpression cluster:MCL_coexpression_mm9:463
Association with transcript: 0bp_to_ENSMUST00000115016, ENSMUST00000115017, ENSMUST00000135304, ENSMUST00000143474, NM_178630, uc009bhm.1, uc009bhn.1, uc009bho.1, uc009bhp.1, uc009bhq.1, uc009bhr.1, uc009bhs.1, uc012eju.1_5end
EntrezGene:Agbl3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Agbl3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G719.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.82
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.31
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.74
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.88
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.94
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.84
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.56
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.97
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.13
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.67
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.37
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.67
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B714.08
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.41
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.57
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.02
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C39.31
Mouse Granule cells, donor2.CNhs12357.11731-123E311.64
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C84.79
Mouse Microglia, donor2.CNhs12634.11736-123E88.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.39
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.83
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.62
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.07
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.51
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.75
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.36
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.61
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.95
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.25
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.68
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.46
Mouse Schwann, donor1.CNhs12507.11728-123D92.35
Mouse Schwann, donor2.CNhs12573.11746-123F93.10
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.25
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F44.55
Mouse hepatocyte, donor8.CNhs13091.11824-124F67.62
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.33
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I810.60
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G617.46
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.94
accessory axillary lymph node, adult.CNhs10475.1063-29H94.40
adrenal gland, adult.CNhs10508.49-24D78.02
adrenal gland, embryo E14.CNhs11038.406-44C54.34
adrenal gland, embryo E16.CNhs11004.1254-43D67.31
adrenal gland, embryo E17.CNhs11043.1263-45I17.38
adrenal gland, embryo E18.CNhs11026.1262-18F57.08
adrenal gland, neonate N00.CNhs11191.1311-23C19.76
adrenal gland, neonate N25.CNhs11223.1377-27I38.17
amnion, adult pregnant day17.5.CNhs10488.583-22A82.97
aorta, adult.CNhs10498.46-23H17.23
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F55.18
bone (os femoris), neonate N16.CNhs11225.1525-43A64.42
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B210.54
cerebellum, neonate N30.CNhs11135.1395-42I27.12
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.28
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.91
corpora quadrigemina, adult.CNhs10501.16-22A49.89
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F111.43
cortex, adult.CNhs10473.12-14D56.95
cortex, neonate N30.CNhs11107.1392-42F27.67
diencephalon, adult.CNhs10482.20-12F28.31
diencephalon, neonate N30.CNhs11201.1388-42B27.63
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.59
epididymis, adult.CNhs10490.58-23B28.09
eyeball, adult.CNhs10484.31-12G48.42
eyeball, embryo E12.CNhs11016.345-16C67.55
eyeball, embryo E14.CNhs10521.399-16E29.20
eyeball, embryo E15.CNhs10593.426-16C97.20
eyeball, embryo E17.CNhs11023.1261-18D411.45
eyeball, neonate N00.CNhs11207.633-15C618.03
eyeball, neonate N01.CNhs11140.1532-43E715.37
eyeball, neonate N02.CNhs11205.1551-44G815.93
eyeball, neonate N16.CNhs11188.777-19A214.23
forelimb, embryo E11.CNhs10596.335-25E24.74
forelimb, embryo E12.CNhs10600.359-14H26.62
forelimb, embryo E13.CNhs10589.384-1E28.09
forelimb, embryo E14.CNhs10577.413-26A84.60
forelimb, embryo E15.CNhs11007.437-20E711.12
forelimb, embryo E17.CNhs10598.1517-43C48.01
forelimb, embryo E18.CNhs11008.1520-43B57.20
gonad, embryo E13.CNhs11044.1564-45I612.74
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E93.52
heart, embryo E12.CNhs11015.353-12F55.86
heart, embryo E13.CNhs11013.376-3I96.66
heart, embryo E14.CNhs10597.403-26D47.34
heart, embryo E15.CNhs11017.431-16C86.69
heart, embryo E16.CNhs11021.457-17C66.17
heart, embryo E17.CNhs11025.479-18E53.95
heart, embryo E18.CNhs11030.1283-20G35.90
heart, neonate N00.CNhs11213.639-21E38.17
heart, neonate N03.CNhs11221.1349-25I27.41
heart, neonate N10.CNhs11118.749-24G16.57
heart, neonate N16.CNhs11209.782-15G16.89
heart, neonate N20.CNhs11127.821-26I63.95
heart, neonate N25.CNhs11196.1351-25D34.39
heart, neonate N30.CNhs11202.1390-42D25.37
hippocampus, adult.CNhs10478.13-16E86.73
hippocampus, neonate N00.CNhs11228.627-43G113.69
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I56.83
intestine, embryo E13.CNhs11010.381-16D56.50
intestine, embryo E15.CNhs10602.976-16D83.48
intestine, embryo E16.CNhs10585.463-22H44.24
intestine, embryo E17.CNhs10582.482-18D34.89
intestine, embryo E18.CNhs10526.1289-20F74.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.98
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F25.37
intestine, neonate N10.CNhs11098.755-23A56.43
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I93.79
kidney, embryo E15.CNhs10997.434-16F86.17
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I26.11
kidney, embryo E18.CNhs11001.1288-20C76.59
kidney, neonate N00.CNhs11214.646-21G79.61
kidney, neonate N10.CNhs11206.758-6D517.90
kidney, neonate N20.CNhs11113.832-19I116.24
kidney, neonate N25.CNhs11122.1353-25F313.50
kidney, neonate N30.CNhs11203.1385-42H114.44
liver, adult pregnant day01.CNhs10466.508-5B24.45
liver, embryo E12.CNhs10601.355-15F85.84
liver, embryo E13.CNhs10524.378-3H63.73
liver, embryo E14.CNhs10594.409-16E13.82
liver, embryo E15.CNhs10520.433-16D75.68
liver, embryo E16.CNhs10523.462-17F56.51
liver, embryo E17.CNhs10510.481-18A33.56
liver, embryo E18.CNhs10579.499-43G46.33
liver, neonate N00.CNhs11117.641-24F46.16
liver, neonate N03.CNhs11123.1345-25G27.14
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H210.05
liver, neonate N10.CNhs11115.751-24B913.42
liver, neonate N20.CNhs11220.823-25A37.32
liver, neonate N25.CNhs11198.1368-26H13.59
liver, neonate N30.CNhs11106.1382-42D17.72
lung, adult.CNhs10474.28-22B18.50
lung, embryo E12.CNhs10522.354-16G25.87
lung, embryo E14.CNhs10604.404-26F85.38
lung, embryo E15.CNhs11020.432-17C58.66
lung, embryo E16.CNhs10998.458-17B611.73
lung, embryo E17.CNhs10605.480-44A611.39
lung, embryo E18.CNhs10583.1287-20I610.00
lung, neonate N00.CNhs11224.640-42C610.73
lung, neonate N06.CNhs11212.683-20E512.77
lung, neonate N07.CNhs11111.715-19A313.29
lung, neonate N10.CNhs11219.750-23E612.60
lung, neonate N20.CNhs11109.822-18A48.85
lung, neonate N25.CNhs11119.1359-25C77.43
lung, neonate N30.CNhs11133.1394-42H29.40
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B65.41
mammary gland, adult pregnant day19.CNhs10476.588-5H23.59
medulla oblongata, adult.CNhs10477.17-12C26.10
medulla oblongata, neonate N30.CNhs11200.1396-42A35.04
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.13
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.79
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.69
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.82
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.69
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.13
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D98.49
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.31
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.53
olfactory brain, adult.CNhs10489.18-22I912.21
ovary, adult.CNhs10507.91-2I711.50
ovary, embryo E18.CNhs11040.505-44H78.73
ovary, neonate N00.CNhs11217.1299-22I416.45
oviduct, adult pregnant day01.CNhs10500.988-6G68.91
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F48.01
pancreas, embryo E15.CNhs11042.1556-45F29.07
pancreas, embryo E16.CNhs11003.460-26E55.47
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I78.30
pancreas, neonate N00.CNhs11105.645-26G95.17
pancreas, neonate N01.CNhs11138.1531-43D79.82
pancreas, neonate N02.CNhs11139.1539-43D89.98
pancreas, neonate N16.CNhs11136.787-43B64.11
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G822.13
pituitary gland, embryo E12.CNhs11018.346-16E67.38
pituitary gland, embryo E13.CNhs11009.370-44C76.34
pituitary gland, embryo E14.CNhs11037.398-44A510.72
pituitary gland, embryo E15.CNhs10592.427-16B914.54
pituitary gland, embryo E16.CNhs11036.449-43F615.87
pituitary gland, embryo E17.CNhs11039.1265-44F513.66
pituitary gland, neonate N00.CNhs11190.1308-22E911.27
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G35.08
prostate, adult.CNhs10470.859-1F84.63
skin, adult.CNhs10492.30-1C33.63
skin, neonate N00.CNhs11124.650-25G46.30
skin, neonate N03.CNhs11215.662-22H35.19
skin, neonate N06.CNhs11097.693-20I54.89
skin, neonate N10.CNhs11108.762-6C43.61
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C96.68
spleen, adult.CNhs10465.25-2G24.10
spleen, embryo E16.CNhs11035.461-43C15.37
spleen, embryo E18.CNhs11011.1271-21F26.85
spleen, neonate N10.CNhs11116.752-24D15.27
spleen, neonate N20.CNhs11112.824-19H14.24
spleen, neonate N25.CNhs11099.1354-25G33.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.80
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E37.12
stomach, embryo E15.CNhs10603.1252-16G88.34
stomach, embryo E16.CNhs11022.459-17D45.51
stomach, embryo E17.CNhs11006.1035-18D55.85
stomach, embryo E18.CNhs10999.1286-20C65.02
stomach, neonate N03.CNhs11193.1340-24B86.47
stomach, neonate N07.CNhs11210.718-18A96.36
stomach, neonate N25.CNhs11104.1355-25E44.71
stomach, neonate N30.CNhs11134.1386-42I11.81
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G544.53
testis, embryo E13.CNhs11031.389-23F54.34
testis, embryo E15.CNhs11034.443-27C56.29
testis, embryo E16.CNhs11033.470-26G57.19
testis, embryo E17.CNhs11029.486-18I55.68
testis, embryo E18.CNhs11027.503-18G56.25
testis, neonate N00.CNhs11189.1300-22B710.68
testis, neonate N07.CNhs11222.726-26I48.07
testis, neonate N10.CNhs11204.763-44D912.37
testis, neonate N20.CNhs11110.839-18H334.79
testis, neonate N30.CNhs11130.1391-42E238.31
thymus, adult.CNhs10471.38-12B56.64
thymus, embryo E14.CNhs11041.402-44I44.26
thymus, embryo E15.CNhs11005.430-45I24.83
thymus, embryo E16.CNhs11002.456-26C54.94
thymus, embryo E17.CNhs10581.478-18C19.13
thymus, embryo E18.CNhs10595.1273-19G43.77
thymus, neonate N02.CNhs11181.1541-43F88.17
thymus, neonate N03.CNhs11137.2104-43C76.50
thymus, neonate N06.CNhs11197.681-26C47.57
thymus, neonate N07.CNhs11211.713-19D38.99
thymus, neonate N10.CNhs11194.748-24E48.67
thymus, neonate N20.CNhs11186.820-7A26.63
thymus, neonate N25.CNhs11125.1362-25G77.02
thymus, neonate N30.CNhs11132.1393-42G210.05
tongue, adult.CNhs10499.32-1B44.99
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E46.95
uterus, adult pregnant day19.CNhs10497.590-15F52.82
uterus, adult.CNhs10509.92-27E54.95
vagina, adult.CNhs10502.89-27D54.93
vesicular gland, adult.CNhs10491.51-27F87.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A37.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.59
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I83.53
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H28.37
whole body, embryo E14.5.CNhs10578.420-27D27.05
whole body, embryo E14.CNhs10519.395-14B16.71
whole body, embryo E16.CNhs10514.453-14F26.25
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.31
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.35
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.77
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.91
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.33
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.76
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.94
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.97
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.39
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.56
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.14
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.78
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.93
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.76
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.99
whole body, embryo E17.5.CNhs10513.490-9F99.07
whole body, embryo E17.CNhs10517.475-3I59.99
whole body, embryo E18.CNhs10516.493-3B37.49
whole body, neonate N00.CNhs10525.657-19C27.74
whole body, neonate N01.CNhs10576.659-23C67.84
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B47.42





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm2.98e-1064
neural plate2.98e-1064
presumptive neural plate2.98e-1064
pre-chordal neural plate3.56e-1049
ecto-epithelium3.40e-0973
structure with developmental contribution from neural crest1.26e-0892
ectoderm-derived structure2.01e-0895
ectoderm2.01e-0895
presumptive ectoderm2.01e-0895
tissue2.55e-08349
central nervous system2.84e-0873
anatomical conduit4.64e-08122
neural tube5.77e-0852
neural rod5.77e-0852
future spinal cord5.77e-0852
neural keel5.77e-0852
brain6.32e-0847
future brain6.32e-0847
regional part of nervous system9.15e-0854
tube9.72e-08114
regional part of brain1.68e-0746
nervous system1.86e-0775
anterior neural tube5.34e-0740
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