Personal tools

FFCP PHASE1:Mm9::chr6:41493669..41493702,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr6:41493669..41493702,+ |short_description=p@chr6:41493669..41493702,+ |description=CAGE_peak_at_chr6:41493669..41493702,+ |association_with_transcript=NA |E...")
 
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr6:41493669..41493702,+
|DHSsupport=NA
|short_description=p@chr6:41493669..41493702,+
|DPIdataset=NA
|description=CAGE_peak_at_chr6:41493669..41493702,+
|association_with_transcript=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=33
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr6:41493669..41493702,+
|description=CAGE_peak_at_chr6:41493669..41493702,+
|id=chr6:41493669..41493702,+
|ontology_enrichment_celltype=CL:0000791!1.08e-07!9;CL:0000789!1.08e-07!9;CL:0002420!1.08e-07!9;CL:0002419!1.08e-07!9;CL:0000790!1.08e-07!9;CL:0000624!5.38e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000791,3.34e-15,9;CL:0000789,3.34e-15,9;CL:0002420,3.34e-15,9;CL:0002419,3.34e-15,9;CL:0000790,3.34e-15,9;CL:0000624,1.16e-13,8;CL:0000084,4.60e-12,11;CL:0000827,4.60e-12,11;CL:0000838,6.88e-11,12;CL:0000893,2.07e-10,6;CL:0002489,2.07e-10,6;CL:0000898,2.07e-10,6;CL:0000809,2.07e-10,6;CL:0000810,2.07e-10,6;CL:0000895,2.07e-10,6;CL:0000808,2.07e-10,6;CL:0000894,2.07e-10,6;CL:0000806,2.07e-10,6;CL:0000807,2.07e-10,6;CL:0000805,2.07e-10,6;CL:0002425,2.07e-10,6;CL:0002436,2.07e-10,6;CL:0002427,2.07e-10,6;CL:0002428,2.07e-10,6;CL:0002429,2.07e-10,6;CL:0002433,2.07e-10,6;CL:0002431,2.07e-10,6;CL:0002432,2.07e-10,6;CL:0000542,6.77e-10,13;CL:0000051,6.77e-10,13;CL:0000738,4.15e-07,17;CL:0002087,4.15e-07,17
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!7.57e-15!29;UBERON:0002370!8.30e-13!23;UBERON:0000974!8.30e-13!23;UBERON:0004807!8.30e-13!23;UBERON:0005058!8.30e-13!23;UBERON:0003351!8.30e-13!23;UBERON:0009113!8.30e-13!23;UBERON:0003295!8.30e-13!23;UBERON:0009722!8.30e-13!23;UBERON:0005562!8.30e-13!23;UBERON:0007690!8.30e-13!23;UBERON:0000064!5.06e-12!99;UBERON:0006562!7.75e-12!24;UBERON:0003408!7.75e-12!24;UBERON:0001557!7.75e-12!24;UBERON:0001042!7.75e-12!24;UBERON:0008814!7.75e-12!24;UBERON:0009145!7.75e-12!24;UBERON:0000072!2.78e-10!27;UBERON:0002193!2.25e-09!48;UBERON:0002390!4.40e-09!45;UBERON:0003061!4.40e-09!45;UBERON:0007811!2.49e-08!86;UBERON:0002075!6.47e-08!19;UBERON:0000063!9.34e-08!35;UBERON:0000153!1.29e-07!94;UBERON:0002021!3.43e-07!10;UBERON:0000411!3.43e-07!10;UBERON:0001950!3.43e-07!10;UBERON:0001264!8.59e-07!12;UBERON:0003922!8.59e-07!12;UBERON:0002114!8.59e-07!12;UBERON:0003923!8.59e-07!12;UBERON:0003924!8.59e-07!12;UBERON:0003921!8.59e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.91e-29,23;UBERON:0000974,2.91e-29,23;UBERON:0004807,2.91e-29,23;UBERON:0005058,2.91e-29,23;UBERON:0003351,2.91e-29,23;UBERON:0009113,2.91e-29,23;UBERON:0003295,2.91e-29,23;UBERON:0009722,2.91e-29,23;UBERON:0005562,2.91e-29,23;UBERON:0007690,2.91e-29,23;UBERON:0006562,8.64e-28,24;UBERON:0003408,8.64e-28,24;UBERON:0001557,8.64e-28,24;UBERON:0001042,8.64e-28,24;UBERON:0008814,8.64e-28,24;UBERON:0009145,8.64e-28,24;UBERON:0000072,4.95e-24,27;UBERON:0004177,5.31e-24,29;UBERON:0005057,5.31e-24,29;UBERON:0000077,7.60e-21,35;UBERON:0007811,1.52e-16,36;UBERON:0000949,1.74e-15,72;UBERON:0002193,1.16e-14,48;UBERON:0002405,1.16e-14,48;UBERON:0002390,1.25e-14,45;UBERON:0003061,1.25e-14,45;UBERON:0002021,4.27e-14,10;UBERON:0000411,4.27e-14,10;UBERON:0001950,4.27e-14,10;UBERON:0000065,8.00e-14,41;UBERON:0001004,2.33e-13,42;UBERON:0000153,6.46e-13,43;UBERON:0001264,4.39e-12,12;UBERON:0003929,6.72e-09,55;UBERON:0002075,3.54e-08,19;UBERON:0002368,1.02e-07,60;UBERON:0002619,1.93e-07,17;UBERON:0000956,7.66e-07,21;UBERON:0001869,7.66e-07,21;UBERON:0000203,7.66e-07,21;UBERON:0002530,9.85e-07,65
|phase1_expression=0.160148847104794,0,0,0,0,0,0,19.8849918100027,3.09735188733667,6.78787126333781,4.28044920563762,4.14815226775749,14.5520620441525,17.2218192765425,0,0.202475267389826,0.699561878128147,0.946386496074713,1.23402990245165,0.42438965179803,0.510259740906419,0,0,0,0.45881856213434,0,0,0,0.380046838912748,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0.436050312760893,0.219686182734472,0,0,1.43752564364972,0,7.25362142011344,7.39406358113421,0,0,0,0.404632921719196,0,0.633831403506179,0.338844532069132,0,0,0,0,0,0,0,0.405017814995072,0.210324961351382,0.285650984403804,0,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0.307213066512487,1.05509030184155,0.731901148819277,0,0,0,0.45839474333043,0.589257170947335,0.284743361598206,0.372798891650601,0.302904773332736,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0.253359865475099,0,0,1.8125651855302,0.148442139064825,0.173485326766136,0,0,0,0,0.125666591329675,0,0.144599356919912,0.884610551949874,0,0,0,0,0,0,0.510914110417183,0,0,0,0.449371918214468,0,0.251308704225729,1.39059456153821,2.04572365864264,0,0.486723789203273,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0.605050573870028,0,0.380451252225118,0,0,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0,0,0.837531287209079,0,0,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.325773918707152,0,0,0.485561272309963,3.02323556964751,10.9390946258421,10.335566250827,7.37844355065426,2.06742634534577,3.63533729477506,7.84294232446387,5.05658812697306,1.05418608574999,1.03135543248187,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,0.23467170806371,0,0,2.4732937941222,0.322928853391811,0.603129249281559,1.19372344003136,1.47726809770555,0,0,1.02522528478712,0.82554747185289,0.555583582109135,0.188368457004691,0.546776910884101,0.686334519619568,0.169978429993855,0.279902904647316,0.138199973804424,0,0,0.609958401380546,0,0.418176592028937,0.436725127492355,0.674321731924103,0.0826534557253359,0,0.129614973291793,0,0,0,0,0.388902376688095,0.516639293910924,0,0.352071715937262,0,0,0,0,30.0210564596769,5.6763060281246,6.05994647272481,9.48422007737904,11.6367352183863,21.2589049615953,15.9859947861559,15.5074003533306,17.4671958410295,14.403086457795,20.7701941381891,16.7627554872374,23.5719012018807,21.154719294864,0,0,0,0,0,0.563047426353546,0.183151624267265,4.93047271881851,0,4.51801474093653,2.30162618253588,3.43737308063638,2.749650917499,1.37016503954128,1.5107877947794,5.40018000185445,2.2516060161211,3.17199686288943,2.07104124700728,0,0,0.170733605754134,0,0.209613162627982,0.367687016900028,0,0.206035057238894,0,0.505394423527595,0,0.188626341386076,0.0936415074698824,0.320125762024346,0.17230640686684,0,0.231768651889711,0,0,0,0,0.177475806159338,0,0.290692833264657,0.188218760830661,0.0846146078916765,0.182927972872773,0,0,0.561142271657738,0,0.0985044823755635,0.409231043169689,0,0.385813221962283,0.249810577937946,1.16965804222704,0.429742108096597,0.382576664137687,0.220591419119515,0
|phase1_expression=0.160148847104794,0,0,0,0,0,0,19.8849918100027,3.09735188733667,6.78787126333781,4.28044920563762,4.14815226775749,14.5520620441525,17.2218192765425,0,0.202475267389826,0.699561878128147,0.946386496074713,1.23402990245165,0.42438965179803,0.510259740906419,0,0,0,0.45881856213434,0,0,0,0.380046838912748,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0.436050312760893,0.219686182734472,0,0,1.43752564364972,0,7.25362142011344,7.39406358113421,0,0,0,0.404632921719196,0,0.633831403506179,0.338844532069132,0,0,0,0,0,0,0,0.405017814995072,0.210324961351382,0.285650984403804,0,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0.307213066512487,1.05509030184155,0.731901148819277,0,0,0,0.45839474333043,0.589257170947335,0.284743361598206,0.372798891650601,0.302904773332736,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0.253359865475099,0,0,1.8125651855302,0.148442139064825,0.173485326766136,0,0,0,0,0.125666591329675,0,0.144599356919912,0.884610551949874,0,0,0,0,0,0,0.510914110417183,0,0,0,0.449371918214468,0,0.251308704225729,1.39059456153821,2.04572365864264,0,0.486723789203273,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0.605050573870028,0,0.380451252225118,0,0,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0,0,0.837531287209079,0,0,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.325773918707152,0,0,0.485561272309963,3.02323556964751,10.9390946258421,10.335566250827,7.37844355065426,2.06742634534577,3.63533729477506,7.84294232446387,5.05658812697306,1.05418608574999,1.03135543248187,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,0.23467170806371,0,0,2.4732937941222,0.322928853391811,0.603129249281559,1.19372344003136,1.47726809770555,0,0,1.02522528478712,0.82554747185289,0.555583582109135,0.188368457004691,0.546776910884101,0.686334519619568,0.169978429993855,0.279902904647316,0.138199973804424,0,0,0.609958401380546,0,0.418176592028937,0.436725127492355,0.674321731924103,0.0826534557253359,0,0.129614973291793,0,0,0,0,0.388902376688095,0.516639293910924,0,0.352071715937262,0,0,0,0,30.0210564596769,5.6763060281246,6.05994647272481,9.48422007737904,11.6367352183863,21.2589049615953,15.9859947861559,15.5074003533306,17.4671958410295,14.403086457795,20.7701941381891,16.7627554872374,23.5719012018807,21.154719294864,0,0,0,0,0,0.563047426353546,0.183151624267265,4.93047271881851,0,4.51801474093653,2.30162618253588,3.43737308063638,2.749650917499,1.37016503954128,1.5107877947794,5.40018000185445,2.2516060161211,3.17199686288943,2.07104124700728,0,0,0.170733605754134,0,0.209613162627982,0.367687016900028,0,0.206035057238894,0,0.505394423527595,0,0.188626341386076,0.0936415074698824,0.320125762024346,0.17230640686684,0,0.231768651889711,0,0,0,0,0.177475806159338,0,0.290692833264657,0.188218760830661,0.0846146078916765,0.182927972872773,0,0,0.561142271657738,0,0.0985044823755635,0.409231043169689,0,0.385813221962283,0.249810577937946,1.16965804222704,0.429742108096597,0.382576664137687,0.220591419119515,0
|short_description=p@chr6:41493669..41493702,+
}}
}}

Latest revision as of 17:56, 5 August 2015

Short description:p@chr6:41493669..41493702, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr6:41493669..41493702, +
Coexpression cluster:MCL_coexpression_mm9:33
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr6:41493669..41493702+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E919.88
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.79
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.15
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E414.55
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E817.22
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.39
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E510.94
pancreas, embryo E17.CNhs10599.1558-45G310.34
pancreas, embryo E18.CNhs10580.1535-43I77.38
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D73.64
pancreas, neonate N02.CNhs11139.1539-43D87.84
pancreas, neonate N16.CNhs11136.787-43B65.06
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B530.02
thymus, embryo E14.CNhs11041.402-44I45.68
thymus, embryo E15.CNhs11005.430-45I26.06
thymus, embryo E16.CNhs11002.456-26C59.48
thymus, embryo E17.CNhs10581.478-18C111.64
thymus, embryo E18.CNhs10595.1273-19G421.26
thymus, neonate N02.CNhs11181.1541-43F815.99
thymus, neonate N03.CNhs11137.2104-43C715.51
thymus, neonate N06.CNhs11197.681-26C417.47
thymus, neonate N07.CNhs11211.713-19D314.40
thymus, neonate N10.CNhs11194.748-24E420.77
thymus, neonate N20.CNhs11186.820-7A216.76
thymus, neonate N25.CNhs11125.1362-25G723.57
thymus, neonate N30.CNhs11132.1393-42G221.15
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D54.93
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell3.34e-159
alpha-beta T cell3.34e-159
immature T cell3.34e-159
mature T cell3.34e-159
immature alpha-beta T cell3.34e-159
CD4-positive, alpha-beta T cell1.16e-138
T cell4.60e-1211
pro-T cell4.60e-1211
lymphoid lineage restricted progenitor cell6.88e-1112
thymocyte2.07e-106
double negative thymocyte2.07e-106
naive T cell2.07e-106
double-positive, alpha-beta thymocyte2.07e-106
CD4-positive, alpha-beta thymocyte2.07e-106
naive thymus-derived CD4-positive, alpha-beta T cell2.07e-106
DN4 thymocyte2.07e-106
DN1 thymic pro-T cell2.07e-106
DN2 thymocyte2.07e-106
DN3 thymocyte2.07e-106
immature single positive thymocyte2.07e-106
early T lineage precursor2.07e-106
mature CD4 single-positive thymocyte2.07e-106
resting double-positive thymocyte2.07e-106
double-positive blast2.07e-106
CD69-positive double-positive thymocyte2.07e-106
CD69-positive, CD4-positive single-positive thymocyte2.07e-106
CD4-positive, CD8-intermediate double-positive thymocyte2.07e-106
CD24-positive, CD4 single-positive thymocyte2.07e-106
lymphocyte6.77e-1013
common lymphoid progenitor6.77e-1013
leukocyte4.15e-0717
nongranular leukocyte4.15e-0717

Uber anatomy
Ontology termp-valuen
thymus2.91e-2923
neck2.91e-2923
respiratory system epithelium2.91e-2923
hemolymphoid system gland2.91e-2923
pharyngeal epithelium2.91e-2923
thymic region2.91e-2923
pharyngeal gland2.91e-2923
entire pharyngeal arch endoderm2.91e-2923
thymus primordium2.91e-2923
early pharyngeal endoderm2.91e-2923
pharynx8.64e-2824
gland of gut8.64e-2824
upper respiratory tract8.64e-2824
chordate pharynx8.64e-2824
pharyngeal arch system8.64e-2824
pharyngeal region of foregut8.64e-2824
segment of respiratory tract4.95e-2427
hemopoietic organ5.31e-2429
immune organ5.31e-2429
mixed endoderm/mesoderm-derived structure7.60e-2135
craniocervical region1.52e-1636
endocrine system1.74e-1572
hemolymphoid system1.16e-1448
immune system1.16e-1448
hematopoietic system1.25e-1445
blood island1.25e-1445
occipital lobe4.27e-1410
visual cortex4.27e-1410
neocortex4.27e-1410
respiratory tract8.00e-1441
respiratory system2.33e-1342
anterior region of body6.46e-1343
pancreas4.39e-1212
gut epithelium6.72e-0955
viscus3.54e-0819
endocrine gland1.02e-0760
regional part of cerebral cortex1.93e-0717
cerebral cortex7.66e-0721
cerebral hemisphere7.66e-0721
pallium7.66e-0721
gland9.85e-0765
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:41493669..41493702,%2B&oldid=3926980"