FFCP PHASE1:Mm9::chr6:87483213..87483258,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:87483213..87483258,-
|short_description=p1@Arhgap25
|description=CAGE_peak_1_at_Arhgap25_5end
|association_with_transcript=0bp_to_ENSMUST00000071024,ENSMUS...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=232201 | |EntrezGene=232201 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BYW1 | |UniProt=Q8BYW1 | ||
|association_with_transcript=0bp_to_ENSMUST00000071024,ENSMUST00000113637,NM_001037727,uc009ctm.1,uc009ctn.1_5end | |||
|cluster_id=chr6:87483213..87483258,- | |||
|description=CAGE_peak_1_at_Arhgap25_5end | |||
|id=chr6:87483213..87483258,- | |||
|ontology_enrichment_celltype=CL:0000988!6.54e-10!32;CL:0002032!6.54e-10!32;CL:0000037!6.54e-10!32;CL:0000566!6.54e-10!32;CL:0000837!6.54e-10!32;CL:0002031!2.49e-08!25;CL:0000738!1.06e-07!17;CL:0002087!1.06e-07!17;CL:0000838!3.88e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.25e-12,32;CL:0002032,4.25e-12,32;CL:0000037,4.25e-12,32;CL:0000837,4.25e-12,32;CL:0002031,2.57e-10,25;CL:0000738,1.32e-08,17;CL:0002087,1.32e-08,17;CL:0002320,1.78e-08,46;CL:0000134,1.78e-08,46;CL:0000838,5.51e-08,12;CL:0000084,2.82e-07,11;CL:0000827,2.82e-07,11;CL:0000542,6.00e-07,13;CL:0000051,6.00e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.29e-19!70;UBERON:0002193!9.48e-19!48;UBERON:0002390!1.81e-17!45;UBERON:0003061!1.81e-17!45;UBERON:0005057!1.24e-10!51;UBERON:0004177!6.97e-10!29;UBERON:0003081!1.29e-08!88;UBERON:0002371!1.37e-08!16;UBERON:0000926!4.01e-08!193;UBERON:0004120!4.01e-08!193;UBERON:0006603!4.01e-08!193;UBERON:0001474!6.12e-08!22;UBERON:0004765!6.12e-08!22;UBERON:0001434!6.12e-08!22;UBERON:0001041!7.73e-08!92;UBERON:0003408!1.24e-07!24;UBERON:0000077!1.74e-07!97;UBERON:0002370!2.93e-07!23;UBERON:0000974!2.93e-07!23;UBERON:0004807!2.93e-07!23;UBERON:0005058!2.93e-07!23;UBERON:0003351!2.93e-07!23;UBERON:0009113!2.93e-07!23;UBERON:0003295!2.93e-07!23;UBERON:0009722!2.93e-07!23;UBERON:0005562!2.93e-07!23;UBERON:0007690!2.93e-07!23;UBERON:0003104!5.08e-07!131;UBERON:0009142!5.08e-07!131;UBERON:0006562!6.16e-07!24;UBERON:0001557!6.16e-07!24;UBERON:0001042!6.16e-07!24;UBERON:0008814!6.16e-07!24;UBERON:0009145!6.16e-07!24;UBERON:0002530!9.94e-07!65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.80e-22,48;UBERON:0002405,1.80e-22,48;UBERON:0002390,5.53e-21,45;UBERON:0003061,5.53e-21,45;UBERON:0004177,3.95e-12,29;UBERON:0005057,3.95e-12,29;UBERON:0000077,4.09e-10,35;UBERON:0002371,1.18e-09,16;UBERON:0001041,1.32e-09,80;UBERON:0003408,1.74e-09,24;UBERON:0003081,2.28e-09,87;UBERON:0001474,2.83e-09,22;UBERON:0004765,2.83e-09,22;UBERON:0001434,2.83e-09,22;UBERON:0002370,4.75e-09,23;UBERON:0000974,4.75e-09,23;UBERON:0004807,4.75e-09,23;UBERON:0005058,4.75e-09,23;UBERON:0003351,4.75e-09,23;UBERON:0009113,4.75e-09,23;UBERON:0003295,4.75e-09,23;UBERON:0009722,4.75e-09,23;UBERON:0005562,4.75e-09,23;UBERON:0007690,4.75e-09,23;UBERON:0002384,1.78e-08,46;UBERON:0006562,2.69e-08,24;UBERON:0001557,2.69e-08,24;UBERON:0001042,2.69e-08,24;UBERON:0008814,2.69e-08,24;UBERON:0009145,2.69e-08,24;UBERON:0001004,5.00e-08,42;UBERON:0002204,8.49e-08,32;UBERON:0000065,1.21e-07,41;UBERON:0005911,2.68e-07,69;UBERON:0002530,4.90e-07,65;UBERON:0000926,8.59e-07,120;UBERON:0004120,8.59e-07,120;UBERON:0006603,8.59e-07,120 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,79.0234739462447,12.248618827195,10.0647746318457,3.08192342805909,2.07407613387875,59.5778540160596,66.2646650336,20.6528052325711,14.1732687172878,4.19737126876888,57.4141140951993,64.3066693610915,40.7414065726109,3.57181818634493,10.8227136808965,9.14199261986274,3.51983330145495,3.89995777814189,0,0,0,0,0.756090389279792,1.33038306393183,0,0,0,0,0,0.204169356262369,66.9650609179052,39.8481025707138,52.3523743973798,74.7053989799388,88.1128675596395,75.2541047198288,0,0,0,0,0,0,0,0,0,57.0460860596304,76.8883870532025,58.1442272516463,0.257259436035947,1.14613375975503,0.515672092277442,0,0,0,0,0,17.5480444869873,36.5880554149781,22.0248835633291,4.49400165777607,2.30530983192933,0.207379224616955,0.135005938331691,0.210324961351382,0,0,0.122490799214954,0,0,1.10115880999389,0.383062014255563,0.614426133024974,0.131886287730194,0.182975287204819,0,0,0,0.45839474333043,0.294628585473668,0.142371680799103,0,0.075726193333184,0.151143120213571,1.15945795480671,4.30211938490693,0,0.539703191637817,0,0.448026887097336,5.33688796500657,0,0,0,0,0,0,0,0,0,0,4.90990682791958,90.3693213928629,3.85949561568544,0.520455980298408,1.52232739156071,0.461230994512117,1.50722640552623,0.940709657085638,1.0053327306374,1.23597483867187,2.89198713839823,13.2691582792481,2.42650274921114,8.83366073841574,7.27312879702833,5.59175283654366,0,0,5.10914110417183,6.70964697233154,5.39912457894067,9.27612657633372,0.748953197024114,1.37250180845588,0.125654352112864,2.43354048269187,1.27857728665165,0.83115217823824,0.973447578406546,0.916554274652847,10.9478134136882,1.51633655060205,2.52530227063769,0.130120442962704,0.229902104433473,0,0.30140963567143,0.340182495756639,0.384341160854549,0.281105173679186,0.776110112217047,0,0.378212160335639,0.351902248327898,0.43839146485515,0.556094498451196,0.348252166522167,0.61734640922383,1.19420560091096,10.5331978096985,6.69104558498259,6.81992398549422,0,1.17263029990548,0.180062061461015,0.23674473558521,0.393528463494808,0.308534225774757,0,0,0.467061369468678,0.493679549740441,0.492502392237286,1.21603214318784,1.16959989940266,1.3173006917463,1.34206418760372,0.210289948564127,0.205809224758569,2.97376904685418,1.32225283331772,0.213288250535234,0.464473343720877,0.77320476793256,0.403367049246685,0.22237804384487,0.951128130562796,2.84717436926707,0.329397909448022,1.25667604400135,0.994782360205754,0.779856348476481,3.59527763461689,2.59365659849633,2.58883655230677,0.189667900953082,0.342745537829186,0,0.407302655690628,0,0.140271639780637,0.632365371242573,1.18088118383682,1.255989822731,0.740382983530803,1.1858105083486,1.16791574001266,1.17935397067922,1.12431056192427,1.82574109249653,3.13530307678142,4.32863948028414,6.90470729881945,5.83686816390127,2.74561413188081,15.814502718009,5.95425516269605,5.61667811606209,3.03094653536534,2.87035861635059,3.37710464954357,11.4546977903295,0,0.488894929326078,0.678980343100753,1.40814148973101,1.34005005953453,1.19021820443007,2.53673742215138,4.09851374676097,3.10050565508285,3.98636921643718,9.5040722535128,12.4333186943445,6.36455857758651,33.1740824666399,23.9318500880232,1.96705709207614,4.69092468718045,0.321101179975584,0.468846746368813,0,2.52470927204373,0,0,0,0,0,0,0,0,0,0,1.56134093729095,0.890328018336276,0.488660878060728,3.46437258242324,3.98235415019888,0.242780636154981,0,0.377210159511796,0.295301892880773,0.922305443831782,1.03371317267288,3.99887102425256,1.78248689192361,1.26414703174326,0,2.06271086496374,0,0.18006109403131,0.905510786479282,1.07168517515796,0.177340233642274,1.07021290561242,0.493647061806363,0.608929898229199,0.469343416127421,0,0.661585194164886,4.45192882941996,0.807322133479528,0.784068024066026,1.07435109602823,1.31312719796049,3.49777003955821,2.03967832211561,25.2888903580822,3.50857675537478,13.7043950253587,11.1137389632768,24.7416552175056,21.7339264546196,17.5077782893671,22.2522809194616,16.9985967779441,0.954670618015114,0,0.813277868507395,0.540026704109006,0.418176592028937,0.436725127492355,0.404593039154462,1.81837602595739,0.785267825952089,1.8146096260851,8.07741107013003,0,0.299033092087958,0,0.388902376688095,0.645799117388655,0.168956125490778,0.469428954583016,0.5208175393758,0.104859344425711,0.724752362478018,0.576060012515731,42.0294790435477,2.8381530140623,5.34096977257102,7.27556608675652,10.2045216530464,15.8945083825012,20.7938127669546,22.1534290761866,32.814096233148,27.2058299758349,27.0214176166733,38.3009471307227,40.4089734889384,50.6076986446194,0.680191150845634,0,0,0,2.70465431645067,1.68914227906064,1.46521299413812,2.35805216986972,1.50471631210609,1.12950368523413,0.460325236507177,2.86447756719698,1.3748254587495,0.685082519770642,1.5107877947794,0.675022500231806,0,0.906284817968409,0.51776031175182,0,0,0.341467211508268,0.729320151204882,1.25767897576789,1.10306105070008,1.33348036680969,0.618105171716683,0.64183841918363,2.02157769411038,1.01391719956096,0.754505365544305,1.49826411951812,1.47257850531199,1.26358031702349,1.42888107384922,0.695305955669133,0.77163688185482,0.824171801606613,1.32479028120958,0.685738504770831,1.59728225543404,1.43061713968393,0.726732083161643,2.1645157495526,1.01537529470012,2.0122077016005,1.31534855718921,1.49384525230448,1.68342681497322,0.949080144993393,1.77308068276014,1.22769312950907,0.619747364743864,0.771626443924566,0.749431733813838,1.87145286756327,1.28922632428979,1.14772999241306,1.54413993383661,1.62307484934295 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,79.0234739462447,12.248618827195,10.0647746318457,3.08192342805909,2.07407613387875,59.5778540160596,66.2646650336,20.6528052325711,14.1732687172878,4.19737126876888,57.4141140951993,64.3066693610915,40.7414065726109,3.57181818634493,10.8227136808965,9.14199261986274,3.51983330145495,3.89995777814189,0,0,0,0,0.756090389279792,1.33038306393183,0,0,0,0,0,0.204169356262369,66.9650609179052,39.8481025707138,52.3523743973798,74.7053989799388,88.1128675596395,75.2541047198288,0,0,0,0,0,0,0,0,0,57.0460860596304,76.8883870532025,58.1442272516463,0.257259436035947,1.14613375975503,0.515672092277442,0,0,0,0,0,17.5480444869873,36.5880554149781,22.0248835633291,4.49400165777607,2.30530983192933,0.207379224616955,0.135005938331691,0.210324961351382,0,0,0.122490799214954,0,0,1.10115880999389,0.383062014255563,0.614426133024974,0.131886287730194,0.182975287204819,0,0,0,0.45839474333043,0.294628585473668,0.142371680799103,0,0.075726193333184,0.151143120213571,1.15945795480671,4.30211938490693,0,0.539703191637817,0,0.448026887097336,5.33688796500657,0,0,0,0,0,0,0,0,0,0,4.90990682791958,90.3693213928629,3.85949561568544,0.520455980298408,1.52232739156071,0.461230994512117,1.50722640552623,0.940709657085638,1.0053327306374,1.23597483867187,2.89198713839823,13.2691582792481,2.42650274921114,8.83366073841574,7.27312879702833,5.59175283654366,0,0,5.10914110417183,6.70964697233154,5.39912457894067,9.27612657633372,0.748953197024114,1.37250180845588,0.125654352112864,2.43354048269187,1.27857728665165,0.83115217823824,0.973447578406546,0.916554274652847,10.9478134136882,1.51633655060205,2.52530227063769,0.130120442962704,0.229902104433473,0,0.30140963567143,0.340182495756639,0.384341160854549,0.281105173679186,0.776110112217047,0,0.378212160335639,0.351902248327898,0.43839146485515,0.556094498451196,0.348252166522167,0.61734640922383,1.19420560091096,10.5331978096985,6.69104558498259,6.81992398549422,0,1.17263029990548,0.180062061461015,0.23674473558521,0.393528463494808,0.308534225774757,0,0,0.467061369468678,0.493679549740441,0.492502392237286,1.21603214318784,1.16959989940266,1.3173006917463,1.34206418760372,0.210289948564127,0.205809224758569,2.97376904685418,1.32225283331772,0.213288250535234,0.464473343720877,0.77320476793256,0.403367049246685,0.22237804384487,0.951128130562796,2.84717436926707,0.329397909448022,1.25667604400135,0.994782360205754,0.779856348476481,3.59527763461689,2.59365659849633,2.58883655230677,0.189667900953082,0.342745537829186,0,0.407302655690628,0,0.140271639780637,0.632365371242573,1.18088118383682,1.255989822731,0.740382983530803,1.1858105083486,1.16791574001266,1.17935397067922,1.12431056192427,1.82574109249653,3.13530307678142,4.32863948028414,6.90470729881945,5.83686816390127,2.74561413188081,15.814502718009,5.95425516269605,5.61667811606209,3.03094653536534,2.87035861635059,3.37710464954357,11.4546977903295,0,0.488894929326078,0.678980343100753,1.40814148973101,1.34005005953453,1.19021820443007,2.53673742215138,4.09851374676097,3.10050565508285,3.98636921643718,9.5040722535128,12.4333186943445,6.36455857758651,33.1740824666399,23.9318500880232,1.96705709207614,4.69092468718045,0.321101179975584,0.468846746368813,0,2.52470927204373,0,0,0,0,0,0,0,0,0,0,1.56134093729095,0.890328018336276,0.488660878060728,3.46437258242324,3.98235415019888,0.242780636154981,0,0.377210159511796,0.295301892880773,0.922305443831782,1.03371317267288,3.99887102425256,1.78248689192361,1.26414703174326,0,2.06271086496374,0,0.18006109403131,0.905510786479282,1.07168517515796,0.177340233642274,1.07021290561242,0.493647061806363,0.608929898229199,0.469343416127421,0,0.661585194164886,4.45192882941996,0.807322133479528,0.784068024066026,1.07435109602823,1.31312719796049,3.49777003955821,2.03967832211561,25.2888903580822,3.50857675537478,13.7043950253587,11.1137389632768,24.7416552175056,21.7339264546196,17.5077782893671,22.2522809194616,16.9985967779441,0.954670618015114,0,0.813277868507395,0.540026704109006,0.418176592028937,0.436725127492355,0.404593039154462,1.81837602595739,0.785267825952089,1.8146096260851,8.07741107013003,0,0.299033092087958,0,0.388902376688095,0.645799117388655,0.168956125490778,0.469428954583016,0.5208175393758,0.104859344425711,0.724752362478018,0.576060012515731,42.0294790435477,2.8381530140623,5.34096977257102,7.27556608675652,10.2045216530464,15.8945083825012,20.7938127669546,22.1534290761866,32.814096233148,27.2058299758349,27.0214176166733,38.3009471307227,40.4089734889384,50.6076986446194,0.680191150845634,0,0,0,2.70465431645067,1.68914227906064,1.46521299413812,2.35805216986972,1.50471631210609,1.12950368523413,0.460325236507177,2.86447756719698,1.3748254587495,0.685082519770642,1.5107877947794,0.675022500231806,0,0.906284817968409,0.51776031175182,0,0,0.341467211508268,0.729320151204882,1.25767897576789,1.10306105070008,1.33348036680969,0.618105171716683,0.64183841918363,2.02157769411038,1.01391719956096,0.754505365544305,1.49826411951812,1.47257850531199,1.26358031702349,1.42888107384922,0.695305955669133,0.77163688185482,0.824171801606613,1.32479028120958,0.685738504770831,1.59728225543404,1.43061713968393,0.726732083161643,2.1645157495526,1.01537529470012,2.0122077016005,1.31534855718921,1.49384525230448,1.68342681497322,0.949080144993393,1.77308068276014,1.22769312950907,0.619747364743864,0.771626443924566,0.749431733813838,1.87145286756327,1.28922632428979,1.14772999241306,1.54413993383661,1.62307484934295 | ||
|short_description=p1@Arhgap25 | |||
}} | }} |
Latest revision as of 21:03, 1 October 2015
Short description: | p1@Arhgap25 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Arhgap25_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000071024, ENSMUST00000113637, NM_001037727, uc009ctm.1, uc009ctn.1_5end |
EntrezGene: | Arhgap25 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.25e-12 | 32 |
hematopoietic oligopotent progenitor cell | 4.25e-12 | 32 |
hematopoietic stem cell | 4.25e-12 | 32 |
hematopoietic multipotent progenitor cell | 4.25e-12 | 32 |
hematopoietic lineage restricted progenitor cell | 2.57e-10 | 25 |
leukocyte | 1.32e-08 | 17 |
nongranular leukocyte | 1.32e-08 | 17 |
connective tissue cell | 1.78e-08 | 46 |
mesenchymal cell | 1.78e-08 | 46 |
lymphoid lineage restricted progenitor cell | 5.51e-08 | 12 |
T cell | 2.82e-07 | 11 |
pro-T cell | 2.82e-07 | 11 |
lymphocyte | 6.00e-07 | 13 |
common lymphoid progenitor | 6.00e-07 | 13 |