FFCP PHASE1:Mm9::chr7:25292076..25292114,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:25292076..25292114,+
|short_description=p4@Zfp428
|description=CAGE_peak_4_at_Zfp428_5end
|association_with_transcript=0bp_to_ENSMUST00000071361,NM_146183,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=232969 | |EntrezGene=232969 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=425 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C1M2 | |UniProt=Q8C1M2 | ||
|association_with_transcript=0bp_to_ENSMUST00000071361,NM_146183,uc009fpt.2,uc009fpu.2_5end | |||
|cluster_id=chr7:25292076..25292114,+ | |||
|description=CAGE_peak_4_at_Zfp428_5end | |||
|id=chr7:25292076..25292114,+ | |||
|ontology_enrichment_celltype=CL:0000221!3.40e-17!44;CL:0000133!3.40e-17!44;CL:0002319!5.63e-17!43;CL:0000055!5.36e-15!50;CL:0000540!3.47e-12!33;CL:0000047!3.47e-12!33;CL:0000031!3.47e-12!33;CL:0000404!3.47e-12!33;CL:0000393!2.31e-11!39;CL:0000211!2.31e-11!39;CL:0002321!2.85e-10!70;CL:0000220!2.85e-10!70;CL:0000117!1.02e-08!23;CL:0000337!1.02e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,6.01e-18,44;CL:0000133,6.01e-18,44;CL:0002319,1.02e-17,43;CL:0000540,1.10e-12,33;CL:0000047,1.10e-12,33;CL:0000031,1.10e-12,33;CL:0000404,1.10e-12,33;CL:0000393,2.03e-11,39;CL:0000211,2.03e-11,39;CL:0002321,7.10e-11,70;CL:0000117,4.86e-09,23;CL:0000337,4.86e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.75e-15!75;UBERON:0001016!6.75e-15!75;UBERON:0001017!1.55e-14!73;UBERON:0005743!1.55e-14!73;UBERON:0004121!2.39e-13!102;UBERON:0000924!2.39e-13!102;UBERON:0006601!2.39e-13!102;UBERON:0002346!3.06e-10!71;UBERON:0003075!3.06e-10!71;UBERON:0007284!3.06e-10!71;UBERON:0003056!2.82e-08!49;UBERON:0001049!3.60e-08!52;UBERON:0005068!3.60e-08!52;UBERON:0006241!3.60e-08!52;UBERON:0007135!3.60e-08!52;UBERON:0000033!4.34e-08!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.10e-15,75;UBERON:0001017,7.42e-15,73;UBERON:0004121,2.53e-13,95;UBERON:0000924,2.53e-13,95;UBERON:0006601,2.53e-13,95;UBERON:0002346,1.88e-11,64;UBERON:0003075,1.88e-11,64;UBERON:0007284,1.88e-11,64;UBERON:0010314,1.31e-10,92;UBERON:0010371,4.70e-09,73;UBERON:0001049,2.96e-08,52;UBERON:0005068,2.96e-08,52;UBERON:0006241,2.96e-08,52;UBERON:0007135,2.96e-08,52;UBERON:0003056,3.68e-08,49;UBERON:0000073,6.41e-08,54;UBERON:0002616,7.22e-07,46;UBERON:0000955,9.09e-07,47;UBERON:0006238,9.09e-07,47 | |||
|phase1_expression=2.08193501236232,1.39590163055744,0,0,0.500895729946347,3.18970616632591,2.33612640595526,0,0,0.234064526321993,0.171217968225505,0.159544317990673,0,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0.935476191661768,0.0992909512008853,0.261199789138935,0.799962113967033,1.14704640533585,0.57423196411502,0.430761996159075,1.50829862880122,0.570070258369122,1.00812051903972,1.10865255327652,5.71527606113668,4.92051830067656,0,3.46621943701529,3.49092755252834,2.24586291888606,0,0,0,0,0,0,4.90997590104751,3.14268486780495,3.12029478674859,4.69434806608824,10.247182349881,10.9843091367236,12.8323733389027,4.61955191363696,12.9377307928474,0.335565212115473,0,0,1.54355661621568,0.85960031981627,0.515672092277442,9.5088736604011,5.81890077199236,14.5781222806421,3.72728985276045,2.66788438833342,0,0,0,12.8828047522914,15.7529505181837,13.0648911508682,16.8757422914613,14.0917724105426,3.99911378165325,4.19650227808066,12.9840247167851,13.3225204715349,13.7882817991503,3.30347642998166,0.383062014255563,1.84327839907492,7.91317726381163,5.03182039813253,3.64639359389732,3.35019598801657,5.06486349028512,2.13917546887534,4.71405736757868,2.42031857358475,8.38797506213853,3.7863096666592,2.34271836331035,1.44932244350839,0,1.3599426674155,0.539703191637817,0.649776417447669,0.448026887097336,0.842666520790511,0.511290967734173,1.55871602761721,1.06001872353102,3.52108549441701,0,0,0,1.73192832808971,3.04031838570118,4.04419556011827,0.45673551887624,0,0.890652834388949,3.46970653532272,2.74018930480927,0.691846491768175,1.3565037649736,1.52865319276416,0.251333182659351,0.494389935468748,0.289198713839823,0,0.647067399789637,2.42925670306433,1.93950101254089,0,2.04946557908083,2.93225389538837,0.255457055208591,0,0,0.254140454146129,2.24685959107234,1.37250180845588,6.40837195775608,2.25971616249959,1.02286182932132,2.0778804455956,2.10913641988085,2.95334155165917,0.622034853050465,0.252722758433675,0.841767423545896,7.28674480591141,6.20735681970377,7.20248519221397,2.26057226753573,3.6739709541717,3.71529788826064,5.99691037182265,4.39795730256327,10.1316956678436,5.8622884852024,4.92663147659057,3.72632745126877,4.72680323683516,0.348252166522167,1.64625709126355,9.15557627365069,0,0.257347907114715,0,4.55676699578104,3.75241695969754,3.6012412292203,3.55117103377815,3.73852040320067,3.08534225774756,2.55787339225449,3.48755421819505,3.26942958628075,1.81015834904829,2.46251196118643,1.78351381000883,1.60819986167866,2.41505126820156,1.07365135008297,1.05144974282064,6.27718135513635,0,1.58670339998127,4.90562976231038,4.18026009348789,2.44848176511977,2.01683524623343,1.11189021922435,1.33157938278791,0.474529061544512,0.494096864172033,0.754005626400808,0.795825888164603,0.38992817423824,0.898819408654221,0.216138049874694,0.398282546508734,10.6214024533726,6.62641373136427,4.50830942692322,4.07302655690629,4.07300223052014,3.36651935473529,1.64414996523069,1.03327103585722,0.31399745568275,1.48076596706161,1.1858105083486,1.66845105716094,1.76903095601883,0.899448449539415,0.405720242777006,0.482354319504834,1.2731292589071,1.43848068725405,0.810676133875177,0.549122826376163,0,0.744281895337007,0.624075346229121,0.505157755894224,0.179397413521912,0.482443521363367,0.369506380333209,7.95863929436036,2.93336957595647,4.58311731593008,2.34690248288502,1.67506257441816,2.14239276797412,0.975668239288994,0.788175720530955,0.8858587585951,1.11618338060241,0.983179888294428,0.172684981865896,0.289298117163023,0,0,0.983528546038072,1.10374698521893,2.0871576698413,1.28932855251423,2.62295912602681,0.504941854408746,4.73262329124385,8.19921363022941,3.44677436372478,6.4521575447189,6.68396022247182,4.24614796183249,5.26253912177363,5.84511715822624,4.34816555741176,1.60660658210904,1.56134093729095,3.5613120733451,3.58351310577867,1.97964147567043,1.32745138339963,5.58395463156457,6.34879469625977,1.69744571780308,2.36241514304618,2.15204603560749,1.80899805217755,1.45413491791002,1.06949213515416,0.948110273807448,0,0,0.680879211507576,7.38250485528372,7.37344497561701,7.71613326113732,3.01478397191865,4.63758925765383,2.96188237083818,5.48036908406279,0.704015124191131,1.48282449604674,0.220528398054962,0.65954501176592,1.29171541356724,0.965006798850494,1.3130957840345,0.656563598980245,0.582961673259701,2.03967832211561,0.683483523191411,3.09580301944834,1.66675074632741,0.376736914009382,0.136694227721025,0.228778173206523,0.339956859987711,0.419854356970974,0.690999869022119,0,6.64305586520384,4.26970880966382,2.37611749807963,1.67270636811575,1.09181281873089,1.48350781023303,1.07449492442937,0.26175594198403,0.129614973291793,0.621339313086926,2.25477175473676,13.1574560518701,14.8912641411388,4.86127970860119,3.61647505737647,4.05494701177868,3.16864544343536,2.47388331203505,5.13810787685983,1.44950472495604,0.864090018773596,0.316011120628178,5.6763060281246,3.28675062927447,2.85825810551149,1.61124026100733,1.39076948346885,0.240390899039938,0.295379054349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|phase1_expression=2.08193501236232,1.39590163055744,0,0,0.500895729946347,3.18970616632591,2.33612640595526,0,0,0.234064526321993,0.171217968225505,0.159544317990673,0,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0.935476191661768,0.0992909512008853,0.261199789138935,0.799962113967033,1.14704640533585,0.57423196411502,0.430761996159075,1.50829862880122,0.570070258369122,1.00812051903972,1.10865255327652,5.71527606113668,4.92051830067656,0,3.46621943701529,3.49092755252834,2.24586291888606,0,0,0,0,0,0,4.90997590104751,3.14268486780495,3.12029478674859,4.69434806608824,10.247182349881,10.9843091367236,12.8323733389027,4.61955191363696,12.9377307928474,0.335565212115473,0,0,1.54355661621568,0.85960031981627,0.515672092277442,9.5088736604011,5.81890077199236,14.5781222806421,3.72728985276045,2.66788438833342,0,0,0,12.8828047522914,15.7529505181837,13.0648911508682,16.8757422914613,14.0917724105426,3.99911378165325,4.19650227808066,12.9840247167851,13.3225204715349,13.7882817991503,3.30347642998166,0.383062014255563,1.84327839907492,7.91317726381163,5.03182039813253,3.64639359389732,3.35019598801657,5.06486349028512,2.13917546887534,4.71405736757868,2.42031857358475,8.38797506213853,3.7863096666592,2.34271836331035,1.44932244350839,0,1.3599426674155,0.539703191637817,0.649776417447669,0.448026887097336,0.842666520790511,0.511290967734173,1.55871602761721,1.06001872353102,3.52108549441701,0,0,0,1.73192832808971,3.04031838570118,4.04419556011827,0.45673551887624,0,0.890652834388949,3.46970653532272,2.74018930480927,0.691846491768175,1.3565037649736,1.52865319276416,0.251333182659351,0.494389935468748,0.289198713839823,0,0.647067399789637,2.42925670306433,1.93950101254089,0,2.04946557908083,2.93225389538837,0.255457055208591,0,0,0.254140454146129,2.24685959107234,1.37250180845588,6.40837195775608,2.25971616249959,1.02286182932132,2.0778804455956,2.10913641988085,2.95334155165917,0.622034853050465,0.252722758433675,0.841767423545896,7.28674480591141,6.20735681970377,7.20248519221397,2.26057226753573,3.6739709541717,3.71529788826064,5.99691037182265,4.39795730256327,10.1316956678436,5.8622884852024,4.92663147659057,3.72632745126877,4.72680323683516,0.348252166522167,1.64625709126355,9.15557627365069,0,0.257347907114715,0,4.55676699578104,3.75241695969754,3.6012412292203,3.55117103377815,3.73852040320067,3.08534225774756,2.55787339225449,3.48755421819505,3.26942958628075,1.81015834904829,2.46251196118643,1.78351381000883,1.60819986167866,2.41505126820156,1.07365135008297,1.05144974282064,6.27718135513635,0,1.58670339998127,4.90562976231038,4.18026009348789,2.44848176511977,2.01683524623343,1.11189021922435,1.33157938278791,0.474529061544512,0.494096864172033,0.754005626400808,0.795825888164603,0.38992817423824,0.898819408654221,0.216138049874694,0.398282546508734,10.6214024533726,6.62641373136427,4.50830942692322,4.07302655690629,4.07300223052014,3.36651935473529,1.64414996523069,1.03327103585722,0.31399745568275,1.48076596706161,1.1858105083486,1.66845105716094,1.76903095601883,0.899448449539415,0.405720242777006,0.482354319504834,1.2731292589071,1.43848068725405,0.810676133875177,0.549122826376163,0,0.744281895337007,0.624075346229121,0.505157755894224,0.179397413521912,0.482443521363367,0.369506380333209,7.95863929436036,2.93336957595647,4.58311731593008,2.34690248288502,1.67506257441816,2.14239276797412,0.975668239288994,0.788175720530955,0.8858587585951,1.11618338060241,0.983179888294428,0.172684981865896,0.289298117163023,0,0,0.983528546038072,1.10374698521893,2.0871576698413,1.28932855251423,2.62295912602681,0.504941854408746,4.73262329124385,8.19921363022941,3.44677436372478,6.4521575447189,6.68396022247182,4.24614796183249,5.26253912177363,5.84511715822624,4.34816555741176,1.60660658210904,1.56134093729095,3.5613120733451,3.58351310577867,1.97964147567043,1.32745138339963,5.58395463156457,6.34879469625977,1.69744571780308,2.36241514304618,2.15204603560749,1.80899805217755,1.45413491791002,1.06949213515416,0.948110273807448,0,0,0.680879211507576,7.38250485528372,7.37344497561701,7.71613326113732,3.01478397191865,4.63758925765383,2.96188237083818,5.48036908406279,0.704015124191131,1.48282449604674,0.220528398054962,0.65954501176592,1.29171541356724,0.965006798850494,1.3130957840345,0.656563598980245,0.582961673259701,2.03967832211561,0.683483523191411,3.09580301944834,1.66675074632741,0.376736914009382,0.136694227721025,0.228778173206523,0.339956859987711,0.419854356970974,0.690999869022119,0,6.64305586520384,4.26970880966382,2.37611749807963,1.67270636811575,1.09181281873089,1.48350781023303,1.07449492442937,0.26175594198403,0.129614973291793,0.621339313086926,2.25477175473676,13.1574560518701,14.8912641411388,4.86127970860119,3.61647505737647,4.05494701177868,3.16864544343536,2.47388331203505,5.13810787685983,1.44950472495604,0.864090018773596,0.316011120628178,5.6763060281246,3.28675062927447,2.85825810551149,1.61124026100733,1.39076948346885,0.240390899039938,0.295379054349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| ||
|short_description=p4@Zfp428 | |||
}} | }} |
Latest revision as of 09:35, 26 September 2015
Short description: | p4@Zfp428 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Zfp428_5end |
Coexpression cluster: | MCL_coexpression_mm9:425 |
Association with transcript: | 0bp_to_ENSMUST00000071361, NM_146183, uc009fpt.2, uc009fpu.2_5end |
EntrezGene: | Zfp428 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 6.01e-18 | 44 |
neurectodermal cell | 6.01e-18 | 44 |
neural cell | 1.02e-17 | 43 |
neuron | 1.10e-12 | 33 |
neuronal stem cell | 1.10e-12 | 33 |
neuroblast | 1.10e-12 | 33 |
electrically signaling cell | 1.10e-12 | 33 |
electrically responsive cell | 2.03e-11 | 39 |
electrically active cell | 2.03e-11 | 39 |
embryonic cell | 7.10e-11 | 70 |
CNS neuron (sensu Vertebrata) | 4.86e-09 | 23 |
neuroblast (sensu Vertebrata) | 4.86e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.10e-15 | 75 |
central nervous system | 7.42e-15 | 73 |
ectoderm-derived structure | 2.53e-13 | 95 |
ectoderm | 2.53e-13 | 95 |
presumptive ectoderm | 2.53e-13 | 95 |
neurectoderm | 1.88e-11 | 64 |
neural plate | 1.88e-11 | 64 |
presumptive neural plate | 1.88e-11 | 64 |
structure with developmental contribution from neural crest | 1.31e-10 | 92 |
ecto-epithelium | 4.70e-09 | 73 |
neural tube | 2.96e-08 | 52 |
neural rod | 2.96e-08 | 52 |
future spinal cord | 2.96e-08 | 52 |
neural keel | 2.96e-08 | 52 |
pre-chordal neural plate | 3.68e-08 | 49 |
regional part of nervous system | 6.41e-08 | 54 |
regional part of brain | 7.22e-07 | 46 |
brain | 9.09e-07 | 47 |
future brain | 9.09e-07 | 47 |