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(Created page with "{{f5samples |id=FF:11931-125I5 |name=CD34 cells differentiated to erythrocyte lineage, biol_ rep1 |sample_id=11931 |rna_tube_id=125I5 |rna_box=125 |rna_position=I5 |sample_cel...")
 
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{{f5samples
{{f5samples
|id=FF:11931-125I5
|DRA_sample_Accession=CAGE@SAMD00005033
|name=CD34 cells differentiated to erythrocyte lineage, biol_ rep1
|accession_numbers=CAGE;DRX008173;DRR009045;DRZ000470;DRZ001855;DRZ011820;DRZ013205
|sample_id=11931
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062
|rna_tube_id=125I5
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000764,CL:0000548,CL:0000763,CL:0002371,CL:0000255,CL:0000558
|rna_box=125
|rna_position=I5
|sample_cell_lot=
|sample_cell_catalog=
|sample_company=
|rna_lot_number=
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=Adult
|sample_tissue=Buffy coat
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=
|rna_od260/230=1.49
|rna_od260/280=2
|sample_cell_type=
|sample_cell_line=
|sample_collaboration=Kim Summers
|sample_experimental_condition=Cells differentiated from CD34 precursors in erythroid lineage (Reticulocytes) Rep 1
|sample_disease=
|rna_sample_type=
|rna_extraction_protocol=
|rna_weight_ug=5.75
|rna_concentration=575
|sample_note=
|profile_hcage=CNhs13552,LSID1033,release012,COMPLETED
|profile_cagescan=
|profile_srnaseq=
|profile_rnaseq=
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000038,CL:0000048,CL:0000049,CL:0000050,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000547,CL:0000548,CL:0000549,CL:0000550,CL:0000552,CL:0000558,CL:0000566,CL:0000723,CL:0000763,CL:0000764,CL:0000765,CL:0000837,CL:0000839,CL:0000988,CL:0002031,CL:0002032,CL:0002320,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000468,UBERON:0000479,UBERON:0001062,UBERON:0002384,UBERON:0007023
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0011169
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
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|ffid_belonging_in_development=CL:0000049,CL:0000134
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|fonse_cell_line=
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|fonse_cell_line_closure=
Line 66: Line 41:
|fonse_treatment=
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|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
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|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD34%2520cells%2520differentiated%2520to%2520erythrocyte%2520lineage%252c%2520biol_%2520rep1.CNhs13552.11931-125I5.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD34%2520cells%2520differentiated%2520to%2520erythrocyte%2520lineage%252c%2520biol_%2520rep1.CNhs13552.11931-125I5.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD34%2520cells%2520differentiated%2520to%2520erythrocyte%2520lineage%252c%2520biol_%2520rep1.CNhs13552.11931-125I5.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD34%2520cells%2520differentiated%2520to%2520erythrocyte%2520lineage%252c%2520biol_%2520rep1.CNhs13552.11931-125I5.hg38.nobarcode.ctss.bed.gz
|id=FF:11931-125I5
|is_a=EFO:0002091;;FF:0000002;;FF:0011169
|is_obsolete=
|library_id=CNhs13552
|library_id_phase_based=2:CNhs13552
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11931
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11931
|name=CD34 cells differentiated to erythrocyte lineage, biol_ rep1
|namespace=
|part_of=
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|profile_hcage=CNhs13552,LSID1033,release012,COMPLETED
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|rna_box=125
|rna_catalog_number=
|rna_concentration=575
|rna_extraction_protocol=
|rna_lot_number=
|rna_od260/230=1.49
|rna_od260/280=2
|rna_position=I5
|rna_rin=
|rna_sample_type=
|rna_tube_id=125I5
|rna_weight_ug=5.75
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_lot=
|sample_cell_type=
|sample_collaboration=Kim Summers
|sample_company=
|sample_description=
|sample_dev_stage=Adult
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=Cells differentiated from CD34 precursors in erythroid lineage (Reticulocytes) Rep 1
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.80564261772772e-294!GO:0043227;membrane-bound organelle;5.59714882016275e-257!GO:0043231;intracellular membrane-bound organelle;9.26196614427829e-257!GO:0043226;organelle;2.44418187315065e-246!GO:0043229;intracellular organelle;1.20002240552545e-245!GO:0044422;organelle part;1.16465556123163e-175!GO:0044446;intracellular organelle part;1.79337750171433e-174!GO:0005737;cytoplasm;2.38443845105251e-159!GO:0005634;nucleus;4.73670795896297e-140!GO:0044237;cellular metabolic process;5.3331847249836e-132!GO:0032991;macromolecular complex;1.96313818762283e-129!GO:0044238;primary metabolic process;1.53436970239201e-123!GO:0044444;cytoplasmic part;8.55840227140304e-118!GO:0043170;macromolecule metabolic process;3.32625174950383e-117!GO:0044428;nuclear part;9.94313756411523e-107!GO:0030529;ribonucleoprotein complex;5.75542093792923e-94!GO:0043233;organelle lumen;5.86821934912659e-89!GO:0031974;membrane-enclosed lumen;5.86821934912659e-89!GO:0003723;RNA binding;5.76190637981575e-87!GO:0043283;biopolymer metabolic process;2.35099519005473e-78!GO:0005739;mitochondrion;1.08799567777345e-73!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.13972513951578e-72!GO:0006259;DNA metabolic process;1.48408127672009e-70!GO:0043234;protein complex;3.97699005663482e-70!GO:0010467;gene expression;6.93266827325747e-63!GO:0031981;nuclear lumen;1.16669367723139e-62!GO:0006396;RNA processing;9.70374207155775e-62!GO:0006412;translation;4.99064776616496e-54!GO:0019538;protein metabolic process;3.46101506168518e-52!GO:0044429;mitochondrial part;2.52716217041374e-51!GO:0016071;mRNA metabolic process;2.82209453264442e-51!GO:0005840;ribosome;1.08709358784585e-50!GO:0005515;protein binding;5.57520201204195e-50!GO:0003676;nucleic acid binding;7.57721829689763e-50!GO:0031967;organelle envelope;1.42317651662586e-49!GO:0031975;envelope;3.63994182326654e-49!GO:0007049;cell cycle;1.66491538905203e-48!GO:0016043;cellular component organization and biogenesis;5.62059334009449e-48!GO:0044267;cellular protein metabolic process;1.50264670754943e-47!GO:0006996;organelle organization and biogenesis;5.39955045685949e-47!GO:0033036;macromolecule localization;7.96678801914584e-47!GO:0044260;cellular macromolecule metabolic process;2.05302660519053e-46!GO:0006397;mRNA processing;7.81877111936393e-46!GO:0008380;RNA splicing;1.05342515780124e-45!GO:0031090;organelle membrane;4.64894413856587e-45!GO:0003735;structural constituent of ribosome;3.96984766096639e-44!GO:0015031;protein transport;1.16663901166059e-43!GO:0009058;biosynthetic process;1.8167846283051e-43!GO:0065003;macromolecular complex assembly;3.56911425809269e-43!GO:0009059;macromolecule biosynthetic process;7.94878627640191e-43!GO:0043228;non-membrane-bound organelle;9.46137181982988e-43!GO:0043232;intracellular non-membrane-bound organelle;9.46137181982988e-43!GO:0005694;chromosome;2.35364995445134e-42!GO:0044249;cellular biosynthetic process;8.17094630012518e-42!GO:0008104;protein localization;1.02628840483448e-41!GO:0045184;establishment of protein localization;3.36450150838531e-41!GO:0005654;nucleoplasm;4.10438232383614e-41!GO:0006974;response to DNA damage stimulus;1.8796486304496e-40!GO:0005829;cytosol;7.25768758920609e-40!GO:0022607;cellular component assembly;2.12867417419726e-39!GO:0022402;cell cycle process;5.22772367871744e-39!GO:0044427;chromosomal part;1.03353190197179e-37!GO:0000278;mitotic cell cycle;1.1714425655751e-37!GO:0051276;chromosome organization and biogenesis;1.22085503319619e-37!GO:0033279;ribosomal subunit;1.41069719540922e-37!GO:0006281;DNA repair;4.0037505456555e-37!GO:0005681;spliceosome;2.85888480996418e-35!GO:0046907;intracellular transport;3.44584094823675e-35!GO:0005740;mitochondrial envelope;4.62323831971758e-35!GO:0022613;ribonucleoprotein complex biogenesis and assembly;7.57542296572785e-35!GO:0022403;cell cycle phase;5.5062738579454e-34!GO:0016070;RNA metabolic process;3.09428309386303e-33!GO:0019866;organelle inner membrane;1.07715150823874e-32!GO:0031966;mitochondrial membrane;1.79136415722091e-32!GO:0044451;nucleoplasm part;1.8868084612515e-32!GO:0000166;nucleotide binding;3.68628223261994e-32!GO:0044445;cytosolic part;2.31942708006154e-31!GO:0005743;mitochondrial inner membrane;2.49178965062387e-30!GO:0000087;M phase of mitotic cell cycle;3.4951495693499e-30!GO:0006886;intracellular protein transport;1.13516560121702e-29!GO:0007067;mitosis;1.29798988464536e-29!GO:0000279;M phase;3.17217317444199e-29!GO:0016462;pyrophosphatase activity;6.11738580714118e-29!GO:0006512;ubiquitin cycle;6.50218984261761e-29!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;6.90889172317199e-29!GO:0016817;hydrolase activity, acting on acid anhydrides;9.70774862719048e-29!GO:0017111;nucleoside-triphosphatase activity;1.55651708214342e-28!GO:0006325;establishment and/or maintenance of chromatin architecture;5.37573807970234e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);6.21060614887636e-28!GO:0016874;ligase activity;1.39044464215087e-27!GO:0006323;DNA packaging;4.38772588008891e-27!GO:0051649;establishment of cellular localization;1.04581686475922e-26!GO:0009719;response to endogenous stimulus;1.17397276043817e-26!GO:0051301;cell division;1.86707255849718e-26!GO:0051641;cellular localization;5.4436875999281e-26!GO:0006260;DNA replication;1.4807629145277e-25!GO:0016887;ATPase activity;2.62600301126322e-23!GO:0006119;oxidative phosphorylation;2.97656834829884e-23!GO:0044265;cellular macromolecule catabolic process;6.90852853857729e-23!GO:0044455;mitochondrial membrane part;3.30847233157101e-22!GO:0032553;ribonucleotide binding;9.45980542122427e-22!GO:0032555;purine ribonucleotide binding;9.45980542122427e-22!GO:0017076;purine nucleotide binding;1.48388372572637e-21!GO:0006511;ubiquitin-dependent protein catabolic process;1.62457920525608e-21!GO:0019941;modification-dependent protein catabolic process;1.9249029354547e-21!GO:0043632;modification-dependent macromolecule catabolic process;1.9249029354547e-21!GO:0005524;ATP binding;1.96972509407662e-21!GO:0051603;proteolysis involved in cellular protein catabolic process;2.62917498469486e-21!GO:0042623;ATPase activity, coupled;3.74812310387914e-21!GO:0031980;mitochondrial lumen;3.80529056124587e-21!GO:0005759;mitochondrial matrix;3.80529056124587e-21!GO:0044257;cellular protein catabolic process;4.18369692232809e-21!GO:0032559;adenyl ribonucleotide binding;4.67358504019012e-21!GO:0005730;nucleolus;5.59249416819348e-21!GO:0022618;protein-RNA complex assembly;6.91854853153664e-21!GO:0030554;adenyl nucleotide binding;1.39068311717311e-20!GO:0065004;protein-DNA complex assembly;1.61916260364598e-20!GO:0043285;biopolymer catabolic process;1.92040070463753e-20!GO:0015935;small ribosomal subunit;1.54866085744224e-19!GO:0006333;chromatin assembly or disassembly;1.98028989528721e-19!GO:0044248;cellular catabolic process;2.93218258670134e-19!GO:0015934;large ribosomal subunit;5.28983721503207e-19!GO:0000785;chromatin;6.67714739977272e-19!GO:0016604;nuclear body;1.02023783141847e-18!GO:0008135;translation factor activity, nucleic acid binding;2.47199118580551e-18!GO:0009057;macromolecule catabolic process;3.24615932049462e-18!GO:0000502;proteasome complex (sensu Eukaryota);6.38730021668377e-18!GO:0006457;protein folding;1.2217615735127e-17!GO:0051186;cofactor metabolic process;1.2217615735127e-17!GO:0008134;transcription factor binding;3.45431160777636e-17!GO:0005746;mitochondrial respiratory chain;7.20832092001622e-17!GO:0030163;protein catabolic process;1.5191162666755e-16!GO:0044453;nuclear membrane part;1.85478292139755e-16!GO:0043412;biopolymer modification;2.53178777819987e-16!GO:0051726;regulation of cell cycle;2.6249261960033e-16!GO:0000074;regulation of progression through cell cycle;3.67303398259281e-16!GO:0004386;helicase activity;4.9619897862512e-16!GO:0000398;nuclear mRNA splicing, via spliceosome;5.37382474179363e-16!GO:0000375;RNA splicing, via transesterification reactions;5.37382474179363e-16!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;5.37382474179363e-16!GO:0012505;endomembrane system;9.54399486154835e-16!GO:0050657;nucleic acid transport;1.35063414224149e-15!GO:0051236;establishment of RNA localization;1.35063414224149e-15!GO:0050658;RNA transport;1.35063414224149e-15!GO:0006334;nucleosome assembly;1.93700374389288e-15!GO:0016568;chromatin modification;2.33958299957888e-15!GO:0006403;RNA localization;2.40757133430396e-15!GO:0005643;nuclear pore;2.68892332172444e-15!GO:0005635;nuclear envelope;4.10643185227071e-15!GO:0031497;chromatin assembly;4.41023594900131e-15!GO:0000775;chromosome, pericentric region;5.00761637436839e-15!GO:0050136;NADH dehydrogenase (quinone) activity;5.13199686810788e-15!GO:0003954;NADH dehydrogenase activity;5.13199686810788e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;5.13199686810788e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.25407820657591e-15!GO:0031965;nuclear membrane;6.08819777416402e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.8023618827713e-14!GO:0003743;translation initiation factor activity;2.15186533000639e-14!GO:0016607;nuclear speck;2.38826534804704e-14!GO:0005761;mitochondrial ribosome;2.49158545793577e-14!GO:0000313;organellar ribosome;2.49158545793577e-14!GO:0006605;protein targeting;2.74939143731272e-14!GO:0051082;unfolded protein binding;2.94750554114985e-14!GO:0042254;ribosome biogenesis and assembly;3.1285535298791e-14!GO:0006413;translational initiation;3.17518558454169e-14!GO:0006464;protein modification process;4.06518559675916e-14!GO:0008026;ATP-dependent helicase activity;5.47410179707777e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.23932705201011e-13!GO:0042775;organelle ATP synthesis coupled electron transport;1.38652437154378e-13!GO:0042773;ATP synthesis coupled electron transport;1.38652437154378e-13!GO:0051028;mRNA transport;2.57034617136759e-13!GO:0015630;microtubule cytoskeleton;3.59793760924556e-13!GO:0048770;pigment granule;3.89283791839804e-13!GO:0042470;melanosome;3.89283791839804e-13!GO:0030964;NADH dehydrogenase complex (quinone);3.91725843632097e-13!GO:0045271;respiratory chain complex I;3.91725843632097e-13!GO:0005747;mitochondrial respiratory chain complex I;3.91725843632097e-13!GO:0003697;single-stranded DNA binding;5.11826003018884e-13!GO:0005819;spindle;6.27580134783663e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;9.97801796499971e-13!GO:0046930;pore complex;1.02460850822906e-12!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.43550602717497e-12!GO:0005813;centrosome;1.50241944897955e-12!GO:0003712;transcription cofactor activity;1.59278408903814e-12!GO:0043687;post-translational protein modification;2.16816929318716e-12!GO:0005815;microtubule organizing center;2.86041667283073e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.94007432250648e-12!GO:0008639;small protein conjugating enzyme activity;4.16815084054803e-12!GO:0006399;tRNA metabolic process;4.58316478848065e-12!GO:0019787;small conjugating protein ligase activity;5.49324836881096e-12!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;6.39420177891466e-12!GO:0043566;structure-specific DNA binding;6.62342558692294e-12!GO:0006913;nucleocytoplasmic transport;6.91465265121195e-12!GO:0006261;DNA-dependent DNA replication;8.02552046479319e-12!GO:0006732;coenzyme metabolic process;9.39297784273899e-12!GO:0065002;intracellular protein transport across a membrane;1.0091795906059e-11!GO:0008565;protein transporter activity;1.30640914725813e-11!GO:0051169;nuclear transport;1.35740911048666e-11!GO:0004842;ubiquitin-protein ligase activity;1.39838578588922e-11!GO:0016881;acid-amino acid ligase activity;2.9404886182311e-11!GO:0051329;interphase of mitotic cell cycle;2.95716396076156e-11!GO:0051188;cofactor biosynthetic process;3.04714737431525e-11!GO:0009259;ribonucleotide metabolic process;3.7223877796604e-11!GO:0009056;catabolic process;5.26853208043583e-11!GO:0016787;hydrolase activity;5.52276138225163e-11!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;5.52276138225163e-11!GO:0006163;purine nucleotide metabolic process;5.94682426281983e-11!GO:0006446;regulation of translational initiation;7.31839033449649e-11!GO:0051325;interphase;1.36979656225182e-10!GO:0048193;Golgi vesicle transport;1.71991593600036e-10!GO:0000075;cell cycle checkpoint;1.98636639195616e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.1126643064895e-10!GO:0007059;chromosome segregation;3.76036814685471e-10!GO:0009150;purine ribonucleotide metabolic process;3.89699333410456e-10!GO:0019222;regulation of metabolic process;3.91720110270786e-10!GO:0016072;rRNA metabolic process;4.52331907545192e-10!GO:0032446;protein modification by small protein conjugation;6.15502743917389e-10!GO:0006364;rRNA processing;6.25131801046016e-10!GO:0009260;ribonucleotide biosynthetic process;6.47872455563094e-10!GO:0006164;purine nucleotide biosynthetic process;7.04717010935471e-10!GO:0000786;nucleosome;8.49194539782749e-10!GO:0005794;Golgi apparatus;9.58566802115214e-10!GO:0008094;DNA-dependent ATPase activity;1.09246897247849e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.16640393626241e-09!GO:0007051;spindle organization and biogenesis;1.52620508945944e-09!GO:0006366;transcription from RNA polymerase II promoter;1.89521978711705e-09!GO:0012501;programmed cell death;2.15935963469529e-09!GO:0006915;apoptosis;2.26914861971718e-09!GO:0016567;protein ubiquitination;2.39568395873827e-09!GO:0005657;replication fork;2.76056986141636e-09!GO:0006461;protein complex assembly;3.09784388669657e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;4.3188748351099e-09!GO:0004812;aminoacyl-tRNA ligase activity;4.3188748351099e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;4.3188748351099e-09!GO:0009152;purine ribonucleotide biosynthetic process;4.51654743425026e-09!GO:0015986;ATP synthesis coupled proton transport;4.81961521838217e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.81961521838217e-09!GO:0016779;nucleotidyltransferase activity;5.0307443056409e-09!GO:0050794;regulation of cellular process;6.50073069252119e-09!GO:0043038;amino acid activation;7.29236459376381e-09!GO:0006418;tRNA aminoacylation for protein translation;7.29236459376381e-09!GO:0043039;tRNA aminoacylation;7.29236459376381e-09!GO:0030532;small nuclear ribonucleoprotein complex;8.11591454967597e-09!GO:0009199;ribonucleoside triphosphate metabolic process;1.02011998067382e-08!GO:0046034;ATP metabolic process;1.0396843491827e-08!GO:0009141;nucleoside triphosphate metabolic process;1.06496262551917e-08!GO:0019829;cation-transporting ATPase activity;1.10791732513274e-08!GO:0003713;transcription coactivator activity;1.46703943117155e-08!GO:0015078;hydrogen ion transmembrane transporter activity;1.53803740535459e-08!GO:0000151;ubiquitin ligase complex;1.66536195127707e-08!GO:0017038;protein import;1.72551565114611e-08!GO:0008219;cell death;1.76102309598517e-08!GO:0016265;death;1.76102309598517e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.11465824364686e-08!GO:0009144;purine nucleoside triphosphate metabolic process;2.11465824364686e-08!GO:0016192;vesicle-mediated transport;2.8485524511384e-08!GO:0016363;nuclear matrix;2.86091735155576e-08!GO:0006310;DNA recombination;3.19149918422937e-08!GO:0006302;double-strand break repair;3.33956915341331e-08!GO:0006754;ATP biosynthetic process;3.60453753007999e-08!GO:0006753;nucleoside phosphate metabolic process;3.60453753007999e-08!GO:0009142;nucleoside triphosphate biosynthetic process;4.95922640087005e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.95922640087005e-08!GO:0005768;endosome;5.31984377322991e-08!GO:0031323;regulation of cellular metabolic process;6.53510268235764e-08!GO:0006950;response to stress;7.5589734506729e-08!GO:0005783;endoplasmic reticulum;7.98053250746668e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.06873128462326e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.06873128462326e-07!GO:0016469;proton-transporting two-sector ATPase complex;1.41282711825392e-07!GO:0009060;aerobic respiration;1.72438373318986e-07!GO:0009108;coenzyme biosynthetic process;1.72438373318986e-07!GO:0000776;kinetochore;1.97100659705388e-07!GO:0009055;electron carrier activity;2.02957241176756e-07!GO:0016740;transferase activity;2.19381106657414e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.35631770396203e-07!GO:0000079;regulation of cyclin-dependent protein kinase activity;2.4037148531008e-07!GO:0006752;group transfer coenzyme metabolic process;2.93315283072887e-07!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.21143817717587e-07!GO:0005839;proteasome core complex (sensu Eukaryota);3.51471988286636e-07!GO:0051427;hormone receptor binding;3.87541991252736e-07!GO:0005667;transcription factor complex;4.41134646972303e-07!GO:0006350;transcription;5.31898003791294e-07!GO:0007005;mitochondrion organization and biogenesis;6.10172435747177e-07!GO:0000245;spliceosome assembly;6.34647525991511e-07!GO:0006401;RNA catabolic process;6.86312641944959e-07!GO:0051246;regulation of protein metabolic process;7.00793619858124e-07!GO:0007088;regulation of mitosis;7.34064132242446e-07!GO:0045333;cellular respiration;7.5410141344586e-07!GO:0004527;exonuclease activity;7.67066626262969e-07!GO:0003899;DNA-directed RNA polymerase activity;9.44660464664186e-07!GO:0003682;chromatin binding;9.58777779786843e-07!GO:0035257;nuclear hormone receptor binding;9.65518131785932e-07!GO:0045259;proton-transporting ATP synthase complex;9.79890682776229e-07!GO:0003724;RNA helicase activity;1.10288836264135e-06!GO:0044432;endoplasmic reticulum part;1.20244098144294e-06!GO:0009117;nucleotide metabolic process;1.3334576947786e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.62840135817378e-06!GO:0051168;nuclear export;1.88028575446953e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;2.0926086755695e-06!GO:0015399;primary active transmembrane transporter activity;2.0926086755695e-06!GO:0004298;threonine endopeptidase activity;2.16778201835986e-06!GO:0003678;DNA helicase activity;2.53104008894985e-06!GO:0003690;double-stranded DNA binding;2.73865249074849e-06!GO:0003677;DNA binding;2.91832094635766e-06!GO:0006352;transcription initiation;3.09555334127455e-06!GO:0048475;coated membrane;3.523452189101e-06!GO:0030117;membrane coat;3.523452189101e-06!GO:0010468;regulation of gene expression;3.8652396055497e-06!GO:0008654;phospholipid biosynthetic process;4.77227307368549e-06!GO:0004518;nuclease activity;4.79190584255048e-06!GO:0006888;ER to Golgi vesicle-mediated transport;4.98053211385359e-06!GO:0051170;nuclear import;5.58915076979368e-06!GO:0006091;generation of precursor metabolites and energy;7.44073987509883e-06!GO:0006099;tricarboxylic acid cycle;7.79581735972335e-06!GO:0046356;acetyl-CoA catabolic process;7.79581735972335e-06!GO:0000228;nuclear chromosome;9.22108031595872e-06!GO:0006084;acetyl-CoA metabolic process;1.03104677372286e-05!GO:0016563;transcription activator activity;1.06982594261374e-05!GO:0005770;late endosome;1.09466083959352e-05!GO:0043623;cellular protein complex assembly;1.10542664276507e-05!GO:0007093;mitotic cell cycle checkpoint;1.12812669474967e-05!GO:0006606;protein import into nucleus;1.18380626466316e-05!GO:0044440;endosomal part;1.19376528040566e-05!GO:0010008;endosome membrane;1.19376528040566e-05!GO:0008168;methyltransferase activity;1.19893851886939e-05!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.2648214839279e-05!GO:0006402;mRNA catabolic process;1.28372886035652e-05!GO:0000082;G1/S transition of mitotic cell cycle;1.47663699430592e-05!GO:0016741;transferase activity, transferring one-carbon groups;1.5133188684876e-05!GO:0006613;cotranslational protein targeting to membrane;1.59703164482068e-05!GO:0046483;heterocycle metabolic process;1.59777482271625e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.6190502238452e-05!GO:0019899;enzyme binding;1.74776977339689e-05!GO:0000070;mitotic sister chromatid segregation;1.86012715326346e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.93579404804369e-05!GO:0000819;sister chromatid segregation;2.02887158621689e-05!GO:0007017;microtubule-based process;2.03973744444501e-05!GO:0042981;regulation of apoptosis;2.03973744444501e-05!GO:0005876;spindle microtubule;2.54426511302771e-05!GO:0007052;mitotic spindle organization and biogenesis;2.55198766351911e-05!GO:0043067;regulation of programmed cell death;2.7774160235751e-05!GO:0046914;transition metal ion binding;2.90148983144225e-05!GO:0003684;damaged DNA binding;2.98873477020055e-05!GO:0006612;protein targeting to membrane;3.16953796159763e-05!GO:0005852;eukaryotic translation initiation factor 3 complex;3.2051842589714e-05!GO:0050789;regulation of biological process;3.21498586133636e-05!GO:0051187;cofactor catabolic process;3.21729819862061e-05!GO:0045786;negative regulation of progression through cell cycle;3.2261822575782e-05!GO:0006270;DNA replication initiation;3.31895091191881e-05!GO:0032774;RNA biosynthetic process;3.3352537196194e-05!GO:0005789;endoplasmic reticulum membrane;3.37120858699802e-05!GO:0031324;negative regulation of cellular metabolic process;3.46768238139543e-05!GO:0042168;heme metabolic process;3.99271146097041e-05!GO:0000793;condensed chromosome;4.48721282610744e-05!GO:0006783;heme biosynthetic process;4.52784878185599e-05!GO:0008186;RNA-dependent ATPase activity;4.7402398475594e-05!GO:0006351;transcription, DNA-dependent;4.80909823411269e-05!GO:0043492;ATPase activity, coupled to movement of substances;4.92257432114397e-05!GO:0000922;spindle pole;5.07101073806348e-05!GO:0006383;transcription from RNA polymerase III promoter;5.31955502407572e-05!GO:0006778;porphyrin metabolic process;5.71646272571405e-05!GO:0033013;tetrapyrrole metabolic process;5.71646272571405e-05!GO:0032508;DNA duplex unwinding;5.80639378137275e-05!GO:0032392;DNA geometric change;5.80639378137275e-05!GO:0009109;coenzyme catabolic process;6.03609908307784e-05!GO:0005793;ER-Golgi intermediate compartment;6.08927988216514e-05!GO:0051052;regulation of DNA metabolic process;6.09396643157747e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;6.78580993939267e-05!GO:0022890;inorganic cation transmembrane transporter activity;7.12769777078063e-05!GO:0030521;androgen receptor signaling pathway;7.20166703542575e-05!GO:0015992;proton transport;7.22907800248765e-05!GO:0009892;negative regulation of metabolic process;7.28579828914054e-05!GO:0006779;porphyrin biosynthetic process;8.39079412348311e-05!GO:0033014;tetrapyrrole biosynthetic process;8.39079412348311e-05!GO:0005762;mitochondrial large ribosomal subunit;8.77555949471583e-05!GO:0000315;organellar large ribosomal subunit;8.77555949471583e-05!GO:0006268;DNA unwinding during replication;8.85114432859586e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;8.86835563434397e-05!GO:0046474;glycerophospholipid biosynthetic process;8.92349603801262e-05!GO:0003729;mRNA binding;8.92872729829888e-05!GO:0006818;hydrogen transport;8.95254915036753e-05!GO:0016251;general RNA polymerase II transcription factor activity;9.10124368576884e-05!GO:0016310;phosphorylation;9.1455351637085e-05!GO:0031072;heat shock protein binding;9.25742235074178e-05!GO:0043069;negative regulation of programmed cell death;9.39620362347989e-05!GO:0008033;tRNA processing;9.62797080318538e-05!GO:0048523;negative regulation of cellular process;9.90344289043778e-05!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.000100792162683592!GO:0030120;vesicle coat;0.00010170195820757!GO:0030662;coated vesicle membrane;0.00010170195820757!GO:0046489;phosphoinositide biosynthetic process;0.000102472961701223!GO:0044431;Golgi apparatus part;0.000102832566777652!GO:0030518;steroid hormone receptor signaling pathway;0.000107178340877111!GO:0006793;phosphorus metabolic process;0.00011505472856717!GO:0006796;phosphate metabolic process;0.00011505472856717!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00012687030429211!GO:0043066;negative regulation of apoptosis;0.000127087941437793!GO:0051087;chaperone binding;0.000141609891822106!GO:0000314;organellar small ribosomal subunit;0.000141609891822106!GO:0005763;mitochondrial small ribosomal subunit;0.000141609891822106!GO:0004004;ATP-dependent RNA helicase activity;0.000143128818218856!GO:0065009;regulation of a molecular function;0.000152922931843449!GO:0016491;oxidoreductase activity;0.000157330260011773!GO:0043021;ribonucleoprotein binding;0.000171721407025396!GO:0043596;nuclear replication fork;0.00017294428951249!GO:0008234;cysteine-type peptidase activity;0.00017562748101505!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00018814299374361!GO:0008270;zinc ion binding;0.000199745243738196!GO:0019783;small conjugating protein-specific protease activity;0.000200287177438692!GO:0006405;RNA export from nucleus;0.00020362854785115!GO:0006916;anti-apoptosis;0.000214723812809486!GO:0003924;GTPase activity;0.000224514640221108!GO:0000059;protein import into nucleus, docking;0.000231797694120181!GO:0006367;transcription initiation from RNA polymerase II promoter;0.000246945826896227!GO:0005773;vacuole;0.000261629870149892!GO:0004843;ubiquitin-specific protease activity;0.000267470118767201!GO:0005874;microtubule;0.000280666181072659!GO:0000725;recombinational repair;0.000294290175387064!GO:0000724;double-strand break repair via homologous recombination;0.000294290175387064!GO:0031570;DNA integrity checkpoint;0.000321925131703715!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000336766835310468!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000363077738874594!GO:0006338;chromatin remodeling;0.000370319151457601!GO:0045449;regulation of transcription;0.000386688085138394!GO:0006650;glycerophospholipid metabolic process;0.000387663291619097!GO:0044454;nuclear chromosome part;0.000404435781248669!GO:0051540;metal cluster binding;0.000422699643684562!GO:0051536;iron-sulfur cluster binding;0.000422699643684562!GO:0044452;nucleolar part;0.000450409851572242!GO:0019867;outer membrane;0.000460210714613653!GO:0015631;tubulin binding;0.000471661239818177!GO:0006082;organic acid metabolic process;0.000471661239818177!GO:0007006;mitochondrial membrane organization and biogenesis;0.000476337195573003!GO:0019752;carboxylic acid metabolic process;0.000488991798753851!GO:0005741;mitochondrial outer membrane;0.000494611671126255!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000503563014501816!GO:0008408;3'-5' exonuclease activity;0.000507500058382151!GO:0046467;membrane lipid biosynthetic process;0.000518370814701376!GO:0009165;nucleotide biosynthetic process;0.000521331995193074!GO:0006289;nucleotide-excision repair;0.000523523610078936!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000542942487515691!GO:0031968;organelle outer membrane;0.000544220438314382!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000562795202407742!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.000594450669743883!GO:0004221;ubiquitin thiolesterase activity;0.000617169516011993!GO:0043681;protein import into mitochondrion;0.000632537068301634!GO:0035258;steroid hormone receptor binding;0.000643724421533681!GO:0043601;nuclear replisome;0.000670605172164919!GO:0030894;replisome;0.000670605172164919!GO:0005769;early endosome;0.000674114155090256!GO:0030384;phosphoinositide metabolic process;0.000705151606863692!GO:0030522;intracellular receptor-mediated signaling pathway;0.000716745836686764!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000722159878824765!GO:0048519;negative regulation of biological process;0.000747367056381497!GO:0006626;protein targeting to mitochondrion;0.000750365277196213!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000755087816155344!GO:0047485;protein N-terminus binding;0.000786186067322678!GO:0006891;intra-Golgi vesicle-mediated transport;0.000835268010668577!GO:0004003;ATP-dependent DNA helicase activity;0.000883981661982775!GO:0006506;GPI anchor biosynthetic process;0.000922033329913355!GO:0019843;rRNA binding;0.000948503310263826!GO:0000049;tRNA binding;0.00097068607879707!GO:0051252;regulation of RNA metabolic process;0.00102120461747811!GO:0005669;transcription factor TFIID complex;0.00105183726004379!GO:0006497;protein amino acid lipidation;0.00112024468560306!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.00112442819106965!GO:0006414;translational elongation;0.00116556008991794!GO:0003711;transcription elongation regulator activity;0.00117480169262012!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0011849914400052!GO:0048500;signal recognition particle;0.00125180204304507!GO:0042770;DNA damage response, signal transduction;0.00130105691011797!GO:0050790;regulation of catalytic activity;0.00131001083368912!GO:0005684;U2-dependent spliceosome;0.00132344142109735!GO:0005798;Golgi-associated vesicle;0.00138507261292124!GO:0000323;lytic vacuole;0.00141455262549544!GO:0005764;lysosome;0.00141455262549544!GO:0006611;protein export from nucleus;0.00142970946754832!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00146052137140724!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00146052137140724!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00146052137140724!GO:0016853;isomerase activity;0.00146149062665198!GO:0008312;7S RNA binding;0.00146168253162402!GO:0030880;RNA polymerase complex;0.00147932746180195!GO:0016790;thiolester hydrolase activity;0.00149756136920738!GO:0003714;transcription corepressor activity;0.00150678882013794!GO:0000077;DNA damage checkpoint;0.00163932670029984!GO:0030218;erythrocyte differentiation;0.00165582341568907!GO:0008276;protein methyltransferase activity;0.00168742311551376!GO:0030118;clathrin coat;0.00170728741627105!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00172753986044276!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00172753986044276!GO:0051920;peroxiredoxin activity;0.00182275695439829!GO:0032259;methylation;0.00190754227334001!GO:0000139;Golgi membrane;0.00190806503278991!GO:0007050;cell cycle arrest;0.00192612051408075!GO:0000152;nuclear ubiquitin ligase complex;0.00194419186379952!GO:0008610;lipid biosynthetic process;0.00204402774122047!GO:0050681;androgen receptor binding;0.00205230575865604!GO:0000910;cytokinesis;0.00205230575865604!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00205230575865604!GO:0042158;lipoprotein biosynthetic process;0.00205342581794694!GO:0005758;mitochondrial intermembrane space;0.00206326218793499!GO:0006355;regulation of transcription, DNA-dependent;0.00206918028960566!GO:0016272;prefoldin complex;0.00211092237331727!GO:0048487;beta-tubulin binding;0.00218773761604819!GO:0032200;telomere organization and biogenesis;0.00224198390020061!GO:0000723;telomere maintenance;0.00224198390020061!GO:0044450;microtubule organizing center part;0.0023265897028966!GO:0042393;histone binding;0.00235221693929737!GO:0050811;GABA receptor binding;0.00236102554500901!GO:0005637;nuclear inner membrane;0.00236270123095492!GO:0006839;mitochondrial transport;0.00242030222181777!GO:0046966;thyroid hormone receptor binding;0.00247207308208236!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00253607792411868!GO:0045047;protein targeting to ER;0.00253607792411868!GO:0031902;late endosome membrane;0.00255986971111691!GO:0006118;electron transport;0.00269883602153397!GO:0000287;magnesium ion binding;0.00270852719196713!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00272949172389441!GO:0006284;base-excision repair;0.00277909180968212!GO:0016564;transcription repressor activity;0.00279197837793371!GO:0004674;protein serine/threonine kinase activity;0.00281110689810885!GO:0006730;one-carbon compound metabolic process;0.00283983002079552!GO:0016481;negative regulation of transcription;0.00284654591978148!GO:0030867;rough endoplasmic reticulum membrane;0.00287185454161431!GO:0051053;negative regulation of DNA metabolic process;0.00289801622049166!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0029260591715216!GO:0006417;regulation of translation;0.00293722212306274!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00297203501614425!GO:0000726;non-recombinational repair;0.00301912855094179!GO:0016859;cis-trans isomerase activity;0.0030558377011136!GO:0006505;GPI anchor metabolic process;0.00310060320204918!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00312124977986026!GO:0000428;DNA-directed RNA polymerase complex;0.00312124977986026!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00314659916499877!GO:0051539;4 iron, 4 sulfur cluster binding;0.00315023831655699!GO:0009112;nucleobase metabolic process;0.00331102729414845!GO:0045454;cell redox homeostasis;0.003389728104048!GO:0065007;biological regulation;0.00345287091510179!GO:0031124;mRNA 3'-end processing;0.00346339860647901!GO:0005525;GTP binding;0.00368806307186978!GO:0005885;Arp2/3 protein complex;0.00382422499271831!GO:0006643;membrane lipid metabolic process;0.00406632679177244!GO:0015980;energy derivation by oxidation of organic compounds;0.00429354750074855!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00469306584129958!GO:0015002;heme-copper terminal oxidase activity;0.00469306584129958!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00469306584129958!GO:0004129;cytochrome-c oxidase activity;0.00469306584129958!GO:0032984;macromolecular complex disassembly;0.0048792035940826!GO:0051297;centrosome organization and biogenesis;0.00493439697111158!GO:0031023;microtubule organizing center organization and biogenesis;0.00493439697111158!GO:0006144;purine base metabolic process;0.00526161995984815!GO:0004532;exoribonuclease activity;0.005264925071628!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.005264925071628!GO:0051789;response to protein stimulus;0.00538846516848996!GO:0006986;response to unfolded protein;0.00538846516848996!GO:0000119;mediator complex;0.00560031158665859!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00576827399700889!GO:0008180;signalosome;0.00578621869230811!GO:0005869;dynactin complex;0.00633935782081285!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00633946268170144!GO:0016584;nucleosome positioning;0.00635801475814333!GO:0005680;anaphase-promoting complex;0.00635801475814333!GO:0016408;C-acyltransferase activity;0.00637229063396261!GO:0031123;RNA 3'-end processing;0.0064837172073286!GO:0000080;G1 phase of mitotic cell cycle;0.00662075937371005!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.00662075937371005!GO:0031970;organelle envelope lumen;0.00680461296283882!GO:0030663;COPI coated vesicle membrane;0.00680461296283882!GO:0030126;COPI vesicle coat;0.00680461296283882!GO:0045045;secretory pathway;0.00693633917597453!GO:0000096;sulfur amino acid metabolic process;0.00713873244208574!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00714426023292713!GO:0006275;regulation of DNA replication;0.00722940597485821!GO:0005663;DNA replication factor C complex;0.0072322100819163!GO:0006520;amino acid metabolic process;0.00761076661294242!GO:0007004;telomere maintenance via telomerase;0.00764479095890814!GO:0040029;regulation of gene expression, epigenetic;0.00784408081310622!GO:0005774;vacuolar membrane;0.00784408081310622!GO:0006368;RNA elongation from RNA polymerase II promoter;0.00785419644345772!GO:0000781;chromosome, telomeric region;0.00791521680885999!GO:0022406;membrane docking;0.00816055231906419!GO:0048278;vesicle docking;0.00816055231906419!GO:0007098;centrosome cycle;0.00834173905006259!GO:0007034;vacuolar transport;0.0083723925640759!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00838559092725403!GO:0043414;biopolymer methylation;0.00850321942269049!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00853341334230657!GO:0031326;regulation of cellular biosynthetic process;0.00860199577802793!GO:0031988;membrane-bound vesicle;0.00867237352245596!GO:0031577;spindle checkpoint;0.00881131442965436!GO:0003887;DNA-directed DNA polymerase activity;0.00881131442965436!GO:0008139;nuclear localization sequence binding;0.00889405906715664!GO:0016407;acetyltransferase activity;0.00889764304544434!GO:0006376;mRNA splice site selection;0.00918465689112955!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00918465689112955!GO:0043624;cellular protein complex disassembly;0.00943208322563832!GO:0048471;perinuclear region of cytoplasm;0.00943208322563832!GO:0043241;protein complex disassembly;0.00951664364948423!GO:0043488;regulation of mRNA stability;0.00971787341312122!GO:0043487;regulation of RNA stability;0.00971787341312122!GO:0008017;microtubule binding;0.0100511280398989!GO:0006979;response to oxidative stress;0.0102267495509939!GO:0006406;mRNA export from nucleus;0.0105057310895093!GO:0016197;endosome transport;0.0108707292972289!GO:0048250;mitochondrial iron ion transport;0.0109259615082772!GO:0005791;rough endoplasmic reticulum;0.011206570754429!GO:0030119;AP-type membrane coat adaptor complex;0.0112182334996269!GO:0004402;histone acetyltransferase activity;0.0117367880137534!GO:0004468;lysine N-acetyltransferase activity;0.0117367880137534!GO:0000178;exosome (RNase complex);0.0118330189946195!GO:0009124;nucleoside monophosphate biosynthetic process;0.0119161286438904!GO:0009123;nucleoside monophosphate metabolic process;0.0119161286438904!GO:0051318;G1 phase;0.0119161286438904!GO:0005048;signal sequence binding;0.0119161286438904!GO:0050662;coenzyme binding;0.0121230970882094!GO:0006644;phospholipid metabolic process;0.0122035001878998!GO:0007021;tubulin folding;0.0122233870922402!GO:0006301;postreplication repair;0.0123688459761842!GO:0044438;microbody part;0.0126293539444974!GO:0044439;peroxisomal part;0.0126293539444974!GO:0006266;DNA ligation;0.0128440094825755!GO:0008156;negative regulation of DNA replication;0.013662576176378!GO:0005832;chaperonin-containing T-complex;0.0139378337745152!GO:0000118;histone deacetylase complex;0.0140356846563238!GO:0030131;clathrin adaptor complex;0.0141280572090896!GO:0000175;3'-5'-exoribonuclease activity;0.0145517948121942!GO:0015036;disulfide oxidoreductase activity;0.0147089762571791!GO:0000792;heterochromatin;0.0148186161889579!GO:0006914;autophagy;0.0149392279244!GO:0042802;identical protein binding;0.0150131147266556!GO:0016023;cytoplasmic membrane-bound vesicle;0.0150903193246498!GO:0006904;vesicle docking during exocytosis;0.0151669404312938!GO:0044437;vacuolar part;0.0157164701212492!GO:0008637;apoptotic mitochondrial changes;0.0158021231931776!GO:0051338;regulation of transferase activity;0.0159676242593991!GO:0042809;vitamin D receptor binding;0.0160564982151028!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0164162489962041!GO:0003746;translation elongation factor activity;0.0167291935926046!GO:0006378;mRNA polyadenylation;0.0167448285905863!GO:0000209;protein polyubiquitination;0.0167448285905863!GO:0004523;ribonuclease H activity;0.0168886335621154!GO:0004540;ribonuclease activity;0.0171756303283697!GO:0000123;histone acetyltransferase complex;0.0171756303283697!GO:0005765;lysosomal membrane;0.0172942561434329!GO:0031903;microbody membrane;0.0173768347991889!GO:0005778;peroxisomal membrane;0.0173768347991889!GO:0032940;secretion by cell;0.0174433936100927!GO:0008287;protein serine/threonine phosphatase complex;0.017796502167833!GO:0032561;guanyl ribonucleotide binding;0.0179163106804634!GO:0019001;guanyl nucleotide binding;0.0179163106804634!GO:0031901;early endosome membrane;0.0180569744449818!GO:0006303;double-strand break repair via nonhomologous end joining;0.018118626685686!GO:0000731;DNA synthesis during DNA repair;0.018118626685686!GO:0031982;vesicle;0.0184881395936835!GO:0048037;cofactor binding;0.0188568788283095!GO:0022884;macromolecule transmembrane transporter activity;0.0195366671063635!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0195366671063635!GO:0051656;establishment of organelle localization;0.019996853520593!GO:0042054;histone methyltransferase activity;0.019996853520593!GO:0005658;alpha DNA polymerase:primase complex;0.0203241439510817!GO:0030261;chromosome condensation;0.020477004581029!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0205304487597905!GO:0008320;protein transmembrane transporter activity;0.0207790785650352!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.020864100502596!GO:0005521;lamin binding;0.0216887730627666!GO:0004177;aminopeptidase activity;0.0219939163975847!GO:0042157;lipoprotein metabolic process;0.0226076072556058!GO:0030132;clathrin coat of coated pit;0.0226339597532257!GO:0042602;flavin reductase activity;0.0227037558496505!GO:0030503;regulation of cell redox homeostasis;0.0228252585574716!GO:0009161;ribonucleoside monophosphate metabolic process;0.0230955415380596!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0230955415380596!GO:0031647;regulation of protein stability;0.0231043639626872!GO:0008632;apoptotic program;0.0232094049121353!GO:0030496;midbody;0.0235559598443966!GO:0006354;RNA elongation;0.0242976865265809!GO:0016746;transferase activity, transferring acyl groups;0.0243266972400552!GO:0009889;regulation of biosynthetic process;0.0243801552961053!GO:0016605;PML body;0.0244864707586061!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0244968815907773!GO:0000777;condensed chromosome kinetochore;0.0247752182688682!GO:0000779;condensed chromosome, pericentric region;0.0247752182688682!GO:0022411;cellular component disassembly;0.025119811895034!GO:0005777;peroxisome;0.025119811895034!GO:0042579;microbody;0.025119811895034!GO:0009451;RNA modification;0.025343033565568!GO:0007010;cytoskeleton organization and biogenesis;0.0256006788467476!GO:0043022;ribosome binding;0.0260866404803388!GO:0051320;S phase;0.0261420052904193!GO:0005652;nuclear lamina;0.0261420052904193!GO:0033170;DNA-protein loading ATPase activity;0.0261420052904193!GO:0003689;DNA clamp loader activity;0.0261420052904193!GO:0030137;COPI-coated vesicle;0.0266482507379213!GO:0007094;mitotic cell cycle spindle assembly checkpoint;0.0268701421898248!GO:0005788;endoplasmic reticulum lumen;0.0270176582114932!GO:0007346;regulation of progression through mitotic cell cycle;0.0272222849380883!GO:0006595;polyamine metabolic process;0.0279250476046261!GO:0050000;chromosome localization;0.0280385597927585!GO:0051303;establishment of chromosome localization;0.0280385597927585!GO:0007243;protein kinase cascade;0.0282341187094046!GO:0000930;gamma-tubulin complex;0.0297086641287891!GO:0003702;RNA polymerase II transcription factor activity;0.0297086641287891!GO:0043549;regulation of kinase activity;0.0298991825817702!GO:0016126;sterol biosynthetic process;0.0300946833104011!GO:0030508;thiol-disulfide exchange intermediate activity;0.0301493665030523!GO:0005881;cytoplasmic microtubule;0.0306176721596162!GO:0030145;manganese ion binding;0.0306450040404968!GO:0006519;amino acid and derivative metabolic process;0.0307914603868109!GO:0016279;protein-lysine N-methyltransferase activity;0.0311663709248988!GO:0018024;histone-lysine N-methyltransferase activity;0.0311663709248988!GO:0016278;lysine N-methyltransferase activity;0.0311663709248988!GO:0031252;leading edge;0.0311945053398164!GO:0051881;regulation of mitochondrial membrane potential;0.0311945053398164!GO:0000339;RNA cap binding;0.0319227971133485!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.032171624857076!GO:0003725;double-stranded RNA binding;0.0322299414602928!GO:0004096;catalase activity;0.0322299414602928!GO:0016747;transferase activity, transferring groups other than amino-acyl groups;0.0322299414602928!GO:0045947;negative regulation of translational initiation;0.0325636891354379!GO:0000738;DNA catabolic process, exonucleolytic;0.0325834653707725!GO:0004536;deoxyribonuclease activity;0.0329188012992746!GO:0008415;acyltransferase activity;0.0329706804635736!GO:0045502;dynein binding;0.033810558458326!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0340714928569235!GO:0045039;protein import into mitochondrial inner membrane;0.0340714928569235!GO:0045792;negative regulation of cell size;0.0344718067955231!GO:0031410;cytoplasmic vesicle;0.0349441181810281!GO:0000086;G2/M transition of mitotic cell cycle;0.035123054043356!GO:0042440;pigment metabolic process;0.0352497364495458!GO:0004418;hydroxymethylbilane synthase activity;0.0354478944110988!GO:0008022;protein C-terminus binding;0.0361066362278094!GO:0035267;NuA4 histone acetyltransferase complex;0.0363975027826008!GO:0009116;nucleoside metabolic process;0.0364129020376729!GO:0008536;Ran GTPase binding;0.0365391883649832!GO:0008538;proteasome activator activity;0.0365641053443279!GO:0007076;mitotic chromosome condensation;0.0386288368680942!GO:0000305;response to oxygen radical;0.039072692387884!GO:0004520;endodeoxyribonuclease activity;0.0392143183544254!GO:0006278;RNA-dependent DNA replication;0.0392902224209552!GO:0051321;meiotic cell cycle;0.0392905547665909!GO:0006415;translational termination;0.0394739844614002!GO:0043065;positive regulation of apoptosis;0.0394932193962093!GO:0030174;regulation of DNA replication initiation;0.0422582819614015!GO:0043631;RNA polyadenylation;0.0430336629693578!GO:0031371;ubiquitin conjugating enzyme complex;0.0442360724641329!GO:0004853;uroporphyrinogen decarboxylase activity;0.0446635525047005!GO:0051340;regulation of ligase activity;0.0446744608281231!GO:0000796;condensin complex;0.04499521042121!GO:0000303;response to superoxide;0.0450550611854601!GO:0005833;hemoglobin complex;0.0453404743968907!GO:0043189;H4/H2A histone acetyltransferase complex;0.045471132287806!GO:0033116;ER-Golgi intermediate compartment membrane;0.0459782731443027!GO:0006917;induction of apoptosis;0.0459782731443027!GO:0007040;lysosome organization and biogenesis;0.0476156858245562!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0483215773800737!GO:0005802;trans-Golgi network;0.0484392214943749!GO:0042026;protein refolding;0.0484392214943749!GO:0006607;NLS-bearing substrate import into nucleus;0.0487237326598906!GO:0008629;induction of apoptosis by intracellular signals;0.0492838805959465!GO:0000018;regulation of DNA recombination;0.049436301174223!GO:0033367;protein localization in mast cell secretory granule;0.049436301174223!GO:0033365;protein localization in organelle;0.049436301174223!GO:0033371;T cell secretory granule organization and biogenesis;0.049436301174223!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.049436301174223!GO:0033375;protease localization in T cell secretory granule;0.049436301174223!GO:0042629;mast cell granule;0.049436301174223!GO:0033377;maintenance of protein localization in T cell secretory granule;0.049436301174223!GO:0033364;mast cell secretory granule organization and biogenesis;0.049436301174223!GO:0033380;granzyme B localization in T cell secretory granule;0.049436301174223!GO:0033379;maintenance of protease localization in T cell secretory granule;0.049436301174223!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.049436301174223!GO:0033368;protease localization in mast cell secretory granule;0.049436301174223!GO:0033366;protein localization in secretory granule;0.049436301174223!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.049436301174223!GO:0033374;protein localization in T cell secretory granule;0.049436301174223!GO:0030176;integral to endoplasmic reticulum membrane;0.049497105788342
|sample_id=11931
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=Buffy coat
|top_motifs=GATA6:7.52766398529;MYB:3.01825633576;STAT5{A,B}:2.8315552346;E2F1..5:2.53203174142;ALX1:2.44287503003;POU1F1:2.35689227857;NFY{A,B,C}:2.2160572292;YY1:2.17842071122;NR6A1:1.92673603282;PBX1:1.87612297878;CDX1,2,4:1.79024261491;ELK1,4_GABP{A,B1}:1.41648135502;FOX{I1,J2}:1.27894467155;ZNF143:1.20513899662;OCT4_SOX2{dimer}:1.1957857086;FOXN1:1.09522571756;FOX{F1,F2,J1}:1.07628794378;HOXA9_MEIS1:1.0671624936;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.06386624454;RBPJ:1.0275959428;POU2F1..3:1.02146778122;TLX2:0.976398633968;NR1H4:0.957421398195;BPTF:0.932973751669;SREBF1,2:0.894761583762;CUX2:0.86305110326;ZBTB16:0.841222787784;EVI1:0.83695931943;CREB1:0.832467945992;HOX{A5,B5}:0.723664128969;GFI1:0.697093380271;NRF1:0.678733679711;PITX1..3:0.643926140695;SOX{8,9,10}:0.611510346337;NANOG:0.610071064661;POU3F1..4:0.606346265634;PAX8:0.602439278781;HAND1,2:0.596205899361;CRX:0.59361122684;TOPORS:0.556835091969;RFX2..5_RFXANK_RFXAP:0.538840614558;NFE2L2:0.508891273607;NFE2:0.494199223702;TGIF1:0.453473617811;FOXA2:0.44784952692;FOX{D1,D2}:0.446003570473;FOXP3:0.397700642919;PDX1:0.383186797307;PPARG:0.381700700652;STAT1,3:0.380618269851;ATF5_CREB3:0.377603797724;NKX2-1,4:0.311201776071;AIRE:0.300467800792;NKX3-1:0.29210706009;PAX2:0.253472349761;HMX1:0.243911350299;NKX3-2:0.225900635557;IKZF2:0.218394259377;FOXQ1:0.184248352555;BREu{core}:0.151558444324;HBP1_HMGB_SSRP1_UBTF:0.122378708866;SNAI1..3:0.0290747341901;ELF1,2,4:0.0271624825549;AR:0.0239642723878;ZEB1:0.0230460016694;FOXP1:0.0190502251141;TFDP1:0.0170913732735;PAX4:0.0143865532561;ATF4:0.00810890220132;RORA:-0.00506413695402;RUNX1..3:-0.0139397779815;ESRRA:-0.0372992756624;NR5A1,2:-0.0441191091902;LMO2:-0.0467643848081;TBP:-0.112476130125;NFIL3:-0.113301741311;SPIB:-0.119357980207;NANOG{mouse}:-0.120160002255;ZNF148:-0.135489726303;TBX4,5:-0.140080494336;IRF7:-0.146802817322;LHX3,4:-0.162967090994;FOXO1,3,4:-0.182256340486;NFE2L1:-0.194488603939;PAX3,7:-0.203395337775;ZNF423:-0.206257099644;SOX5:-0.210843989226;IRF1,2:-0.211544161892;HNF4A_NR2F1,2:-0.221683578809;PRRX1,2:-0.224341872433;MEF2{A,B,C,D}:-0.24108155923;T:-0.257661137409;SPI1:-0.260020478946;TAL1_TCF{3,4,12}:-0.260807084712;HNF1A:-0.272449286554;ATF2:-0.297473562861;ARID5B:-0.301041879716;MAFB:-0.304942528744;POU6F1:-0.33800094941;MYOD1:-0.374478999356;ZNF238:-0.38730001651;VSX1,2:-0.390925675963;LEF1_TCF7_TCF7L1,2:-0.399922418869;STAT2,4,6:-0.403243456477;NFKB1_REL_RELA:-0.433467679863;CEBPA,B_DDIT3:-0.447700323825;DBP:-0.454551569908;ZNF384:-0.456827307465;BACH2:-0.458435107964;SMAD1..7,9:-0.466223110711;DMAP1_NCOR{1,2}_SMARC:-0.466689477541;RFX1:-0.478408682312;HLF:-0.482810010483;RXRA_VDR{dimer}:-0.496887717528;ALX4:-0.501006011794;MYBL2:-0.544117745152;AHR_ARNT_ARNT2:-0.548053359071;ETS1,2:-0.558570118102;KLF4:-0.565141434005;NR3C1:-0.567021628388;FOXD3:-0.56795117756;FOS_FOS{B,L1}_JUN{B,D}:-0.569645836366;HOX{A6,A7,B6,B7}:-0.595595963253;REST:-0.595923955684;ADNP_IRX_SIX_ZHX:-0.605592902487;HSF1,2:-0.612232677802;NKX2-3_NKX2-5:-0.625926843314;HES1:-0.627469436969;FOSL2:-0.627501402152;FOXM1:-0.634434589867;JUN:-0.645706709087;UFEwm:-0.651005027746;TFAP4:-0.670567979129;PAX6:-0.670725157073;TLX1..3_NFIC{dimer}:-0.673537417872;EN1,2:-0.690152575152;ZIC1..3:-0.691035079378;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.698244829072;NFIX:-0.706858244396;NKX6-1,2:-0.712403392222;TP53:-0.727860640845;NKX2-2,8:-0.791067137033;ZFP161:-0.792188447503;MYFfamily:-0.793479345626;PAX1,9:-0.796782061436;IKZF1:-0.822900104651;HOX{A4,D4}:-0.823906479339;ZBTB6:-0.850908265136;NFATC1..3:-0.879097522561;MTF1:-0.883007436361;RREB1:-0.884080372524;bHLH_family:-0.913410651152;NHLH1,2:-0.916899385393;CDC5L:-0.94335830071;POU5F1:-0.962086025306;SOX17:-0.965463551247;SPZ1:-0.980914587745;ONECUT1,2:-0.985586654908;TEF:-1.01654440605;GCM1,2:-1.03693537444;XBP1:-1.06726772523;GATA4:-1.08746482091;GZF1:-1.1013948399;GTF2I:-1.10492918609;MED-1{core}:-1.11125307119;GLI1..3:-1.12652091172;HMGA1,2:-1.13318740993;PAX5:-1.13642166465;SRF:-1.1741908202;MAZ:-1.17669729099;TEAD1:-1.23383472277;GTF2A1,2:-1.28322794481;PRDM1:-1.29693133067;MZF1:-1.38286034946;SOX2:-1.38790746907;FOXL1:-1.41903809095;TFCP2:-1.65430361361;ATF6:-1.68224111359;ESR1:-1.70422476697;GFI1B:-1.7487717734;HIF1A:-1.75068648769;MTE{core}:-1.80568390578;XCPE1{core}:-1.82835616043;EGR1..3:-1.91882103308;TFAP2B:-1.92628804503;EBF1:-2.03838048374;RXR{A,B,G}:-2.07049639712;PATZ1:-2.09386674101;HIC1:-2.10417236937;EP300:-2.14676286956;SP1:-2.24671254189;TFAP2{A,C}:-2.39227815491
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11931-125I5;search_select_hide=table117:FF:11931-125I5
}}
}}

Latest revision as of 18:29, 4 June 2020

Name:CD34 cells differentiated to erythrocyte lineage, biol_ rep1
Species:Human (Homo sapiens)
Library ID:CNhs13552
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueBuffy coat
dev stageAdult
sexNA
ageNA
cell typeNA
cell lineNA
companyNA
collaborationKim Summers
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typeNA
extraction protocol (Details)NA

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005033
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13552 CAGE DRX008173 DRR009045
Accession ID Hg19

Library idBAMCTSS
CNhs13552 DRZ000470 DRZ001855
Accession ID Hg38

Library idBAMCTSS
CNhs13552 DRZ011820 DRZ013205
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.0763
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.977
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0.473
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.0825
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.271
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.133
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.0622
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.113
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus1.229
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.127
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.765
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.0393
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.466
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.758
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen1.144
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.0861
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13552

Jaspar motifP-value
MA0002.20.382
MA0003.10.562
MA0004.10.841
MA0006.10.81
MA0007.10.788
MA0009.10.222
MA0014.10.875
MA0017.10.266
MA0018.20.993
MA0019.10.813
MA0024.13.4061e-10
MA0025.10.832
MA0027.10.527
MA0028.10.0123
MA0029.10.0234
MA0030.10.844
MA0031.10.0975
MA0035.21.28757e-37
MA0038.10.955
MA0039.20.935
MA0040.10.196
MA0041.10.5
MA0042.10.958
MA0043.10.421
MA0046.10.561
MA0047.20.414
MA0048.10.601
MA0050.10.668
MA0051.10.356
MA0052.10.0125
MA0055.10.12
MA0057.10.899
MA0058.10.55
MA0059.10.374
MA0060.17.06474e-9
MA0061.10.843
MA0062.20.0085
MA0065.20.00925
MA0066.10.122
MA0067.10.768
MA0068.10.00291
MA0069.10.439
MA0070.10.931
MA0071.10.248
MA0072.10.983
MA0073.10.851
MA0074.10.71
MA0076.15.08273e-4
MA0077.10.0908
MA0078.10.206
MA0079.20.0676
MA0080.20.0488
MA0081.10.886
MA0083.10.00264
MA0084.10.558
MA0087.10.17
MA0088.10.00899
MA0090.10.0838
MA0091.10.13
MA0092.10.642
MA0093.10.883
MA0099.20.128
MA0100.10.00372
MA0101.10.244
MA0102.20.112
MA0103.10.427
MA0104.20.16
MA0105.10.00479
MA0106.10.504
MA0107.10.0409
MA0108.20.00677
MA0111.10.191
MA0112.20.0181
MA0113.10.776
MA0114.10.0989
MA0115.10.115
MA0116.14.04889e-6
MA0117.10.441
MA0119.10.0913
MA0122.10.725
MA0124.10.402
MA0125.10.298
MA0131.10.257
MA0135.10.0311
MA0136.10.683
MA0137.20.522
MA0138.20.9
MA0139.10.24
MA0140.11.41363e-85
MA0141.10.0414
MA0142.10.507
MA0143.10.416
MA0144.10.327
MA0145.10.994
MA0146.10.414
MA0147.10.116
MA0148.10.275
MA0149.10.0301
MA0150.10.00173
MA0152.10.767
MA0153.10.336
MA0154.10.0547
MA0155.10.445
MA0156.10.482
MA0157.10.137
MA0159.10.313
MA0160.10.136
MA0162.10.916
MA0163.15.38847e-8
MA0164.10.83
MA0258.10.0484
MA0259.10.428



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13552

Novel motifP-value
10.0091
100.0194
1000.331
1010.064
1020.766
1030.201
1040.719
1050.55
1060.892
1070.147
1080.22
1090.0378
110.0605
1100.209
1110.142
1120.476
1130.913
1140.193
1150.0339
1160.425
1170.035
1180.436
1190.976
120.212
1200.431
1210.48
1220.394
1230.0642
1240.429
1250.222
1260.75
1270.217
1280.981
1290.698
130.0219
1300.923
1310.528
1320.0492
1330.0402
1340.821
1350.779
1360.408
1370.769
1380.986
1390.908
140.742
1400.508
1410.115
1420.942
1430.199
1440.355
1450.931
1460.972
1470.115
1480.47
1490.718
150.045
1500.94
1510.654
1520.0876
1530.486
1540.565
1550.0282
1560.219
1570.271
1580.891
1590.0952
160.378
1600.741
1610.18
1620.648
1630.199
1640.38
1650.0861
1660.558
1670.286
1680.862
1690.728
170.792
180.555
190.658
20.464
200.169
210.108
220.85
230.256
240.244
250.0956
260.205
270.736
280.415
290.0142
30.232
300.0882
310.998
320.213
330.162
340.525
350.182
360.0257
370.355
380.322
390.637
40.875
400.203
410.446
420.188
430.212
440.603
450.695
460.0953
470.0272
480.164
490.0407
50.245
500.57
510.898
520.608
530.554
540.777
550.96
560.807
570.0323
580.199
590.906
60.44
600.95
610.699
620.0587
630.831
640.352
650.888
660.0134
670.74
680.188
690.218
70.0692
700.989
710.0295
720.767
730.973
740.666
750.00689
760.473
770.961
780.00552
790.173
80.366
800.939
810.656
820.463
830.426
840.544
850.473
860.636
870.453
880.88
890.986
90.893
900.0195
910.613
920.823
930.121
940.393
950.0771
960.0969
970.443
980.0712
990.0837



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13552


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000764 (erythroid lineage cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000558 (reticulocyte)

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0011169 (human reticulocyte sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)

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