FFCP PHASE1:Hg19::chr11:18343656..18343667,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:18343656..18343667,- to FFCP PHASE1:Hg19::chr11:18343656..18343667,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11234 | |EntrezGene=11234 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17022 | |HGNC=17022 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UPZ3 | |UniProt=Q9UPZ3 | ||
|association_with_transcript=53bp_to_ENST00000349215,ENST00000396253,NM_007216,NM_181507,uc001mod.1,uc001moe.1_5end | |||
|cluster_id=chr11:18343656..18343667,- | |||
|description=CAGE_peak_6_at_HPS5_5end | |||
|id=chr11:18343656..18343667,- | |||
|ontology_enrichment_celltype=CL:0000738!1.05e-24!140;CL:0000766!3.76e-24!76;CL:0002009!2.95e-22!65;CL:0000557!4.20e-22!71;CL:0000839!4.10e-21!70;CL:0002194!5.70e-21!63;CL:0000576!5.70e-21!63;CL:0000040!5.70e-21!63;CL:0000559!5.70e-21!63;CL:0002031!2.65e-20!124;CL:0000037!3.81e-20!172;CL:0000566!3.81e-20!172;CL:0002032!1.76e-19!165;CL:0000837!1.76e-19!165;CL:0002087!2.15e-19!119;CL:0000988!3.64e-19!182;CL:0000763!1.09e-18!112;CL:0000049!1.09e-18!112;CL:0000860!1.22e-18!45;CL:0002057!4.84e-18!42;CL:0000134!1.60e-11!358;CL:0000219!4.36e-10!390;CL:0002320!4.80e-10!365;CL:0000048!8.38e-09!430;CL:0000723!2.11e-08!436;CL:0000034!4.82e-08!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.03e-46;33!CL:0002057;1.03e-46;33!CL:0000473;3.01e-37;39!CL:0000234;3.01e-37;39!CL:0000576;1.55e-21;48!CL:0000766;5.30e-16;69!CL:0000840;3.67e-11;5!CL:0002579;2.01e-08;3!CL:0000738;7.02e-08;136!CL:0000763;1.61e-07;100!CL:0000990;2.73e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.40e-43,61;CL:0000766,3.39e-40,72;CL:0002194,1.34e-39,59;CL:0000576,1.34e-39,59;CL:0000040,1.34e-39,59;CL:0000559,1.34e-39,59;CL:0000860,2.10e-39,42;CL:0002057,2.10e-39,42;CL:0000473,3.28e-39,48;CL:0000234,3.28e-39,48;CL:0000557,8.02e-39,67;CL:0000839,1.91e-34,66;CL:0000763,9.06e-27,108;CL:0000049,9.06e-27,108;CL:0000738,5.18e-24,136;CL:0002031,1.95e-22,120;CL:0002087,8.44e-21,115;CL:0002032,1.63e-18,161;CL:0000837,1.63e-18,161;CL:0000037,2.82e-17,168;CL:0000988,7.86e-16,177;CL:0000840,2.51e-11,5;CL:0001029,2.51e-11,5;CL:0000134,3.69e-09,354;CL:0002320,9.95e-09,361;CL:0000048,2.28e-08,427;CL:0002579,2.42e-08,3;CL:0000034,3.22e-08,441;CL:0000723,4.69e-08,433;CL:0000219,9.84e-08,386;CL:0000990,2.14e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.19e-29;42!CL:0000049;1.94e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.06e-19!80;UBERON:0001474!4.10e-17!86;UBERON:0002390!1.08e-16!102;UBERON:0003061!1.08e-16!102;UBERON:0002405!4.14e-16!115;UBERON:0004765!4.85e-15!101;UBERON:0001434!4.85e-15!101;UBERON:0002193!1.53e-14!112;UBERON:0002384!4.33e-10!375;UBERON:0002204!2.08e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.83e-11;6!UBERON:0002358;3.83e-11;6!UBERON:0003684;3.83e-11;6!UBERON:0001178;3.83e-11;6!UBERON:0004457;2.80e-07;9!UBERON:0000042;2.80e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.95e-35,76;UBERON:0001474,7.76e-32,82;UBERON:0004765,3.96e-28,90;UBERON:0002405,6.66e-27,93;UBERON:0002390,4.99e-25,98;UBERON:0003061,4.99e-25,98;UBERON:0001434,2.49e-24,100;UBERON:0002193,8.37e-22,108;UBERON:0002204,2.70e-17,167;UBERON:0003688,4.46e-11,6;UBERON:0002358,4.46e-11,6;UBERON:0003684,4.46e-11,6;UBERON:0001178,4.46e-11,6;UBERON:0003081,8.61e-11,203;UBERON:0002384,1.10e-08,371;UBERON:0000926,5.21e-08,315;UBERON:0004120,5.21e-08,315;UBERON:0006603,5.21e-08,315 | |||
|phase1_expression=2.54349730978779,1.49870366723688,2.53717927372748,5.00366491765652,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.458480434487708,0.492603536699674,0.393553906568396,0.786728553697808,1.15148819429164,0.309632246632152,0,0.30120591877825,0,1.00707360754392,0.426507697462265,0.587200878669695,0,0.401088894940283,0.651032612147555,0.223915474239924,0,0.77272670290256,0.581592955118259,0.377875943688809,0.970336244751265,1.39457422143411,2.87817521615278,3.71647645074124,1.43846196161075,1.0246428261164,3.07426898855161,4.82643953031266,5.16387746867061,10.8341189275473,1.31769637679823,1.09162460023138,4.49446968890169,2.14258724659632,3.53021929783703,5.11469700639233,1.64925650093358,1.39624560335142,1.70489900213078,2.03146467040009,2.26954089876456,2.4912889959823,1.7587406567972,2.60741459210101,4.77815458351257,1.21079900526674,3.31449872388808,4.43047342417238,0.211255286311942,0.850417199860174,0.628975936525128,0.44931452458598,0.300353785683013,0.32145117339416,0.285012743741249,0,0.365328307529268,0,0.546138611262131,0.889509253863555,0.853460445133014,0.400395987036012,0,0.661044872784862,0,1.1384259382189,0,0.382273228125229,0,2.24203425192614,0.263384084775077,0,0,0.616804496998528,0.167186495390678,0.32592226663359,0,0,0.891283655081389,0.883817722424512,0.221533894583621,0.541607727530031,0.384273959177026,0.130059347559878,0,0.829050053357545,0,0.14828656316206,0.267540828089713,1.04535523804977,0.226618685395132,0,0.34362744548263,0.759059076058509,0.637130828648193,0,0.950452044448374,0.451725357233318,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0,1.15076305659177,0.722878304769133,0.50133791063589,0.144846518960824,0,0,0.0945348171640679,0,0.175669571386252,0.916853528483988,0,0,2.92092654289215,2.08955684759121,1.72845348674525,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0,0,0.357198913136319,0.22452937262617,0,0,0,0,2.63560834872127,0,0,0.496971951695318,0.633152558322899,0.926864265692532,0.573673241497627,0,0.560677600142307,0,0.49333509683432,0,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0.408308342509787,0.245668634623536,0,1.18800285728205,0,0,0,0,0,0.554128230968366,0.438977620880838,0.30648779579902,0.150238058906597,0.340296549480063,0.89694817844431,0.213557388818567,0.211931901159562,0.300091096084402,0.721367704669072,0.257640540045629,0.37223371266318,0.675105328965065,0.584622030967192,0.252433774244115,0.184099797284599,0.161646056818812,0.355009592516614,0,0.847802961552438,0.193260853163297,0,0.286804595389004,0,0,0.116193942869518,0.207322110030741,0,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0.828147600278907,1.34867752062481,0.241011029883482,0.882351781859152,0.435758888184812,0.71181185733329,0.404493924480493,1.56977172100277,0,0,0,0,0,1.26755034821831,0,4.72631925345123,0.441463099414651,0.491953754172454,0,0.219500570817251,0,0.301586917234893,0.185176890317059,0,0,0,0,0.234817388471643,0.577465791044295,0,0,0,1.71697232418975,0.246217006087397,0.936017060556951,0.445893486866185,0,0.335964256397719,0.992425680696705,0.895585227028483,0.871901815541886,0.383382679165211,0.985326475791887,0.176096868026452,0.621984346622316,0.144119953416961,0.75745460055828,0.380987365753014,0,0,0,0.411309970813294,0.300343057843917,1.14330573052231,0.224262168690721,0.87192013766656,0.22001485746285,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.301439377059586,0,0.399891964728228,0,2.00902836572851,2.10833939483032,0.239624855491583,0,0,1.01346914667305,0.205476322550383,0.358121926479791,0.224170287987055,0.788123040807709,0.215627574859517,0.641715181398742,0.254094624222463,0,0,0,0,0.749007023947182,2.99161459204025,3.72973962092432,0,0,0,0.623912584592421,0.356857977594324,1.26161932027148,0.937131319941706,0,0,0,0,0,0.260650843404249,0,0,0.206768026122887,0.431428401637234,0.533637789017222,0.303127571446259,0,0.30239029332968,0.496215615637554,3.52962538562544,0.561320188866147,1.15325234330131,6.14048698880044,1.28683136914886,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0,0.604297247958111,0,0.184161977871793,0.114814448164607,0.182091168006717,0,0,0,0,0,0.422206515571503,0,0,0,0,0.270946437543853,0,0,0,0,0,0.522870902049801,0,0,0.325378394664303,0.515205058238611,0.54941678891006,0.165018999841176,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0.0852266274161009,0,0.165284915360978,0,0.893288987462089,0.2023155617111,0.464845549297286,0.62962469366128,1.3940745403212,0,1.59691809095107,0,0.18532421910392,0.572499546967965,0.744316738719335,0.316379424718726,0.190630193923825,0,0,0,0,0.359744915166629,0.274537029736055,0,0.202182481573316,1.58510321173008,0.421258456238981,0,0,0,0.136499911407986,0.141405431953713,0,0.551365343546124,1.32687795048244,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0.1434113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| ||
|short_description=p6@HPS5 | |||
}} | }} |
Latest revision as of 02:23, 17 September 2015
Short description: | p6@HPS5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HPS5_5end |
Coexpression cluster: | NA |
Association with transcript: | 53bp_to_ENST00000349215, ENST00000396253, NM_007216, NM_181507, uc001mod.1, uc001moe.1_5end |
EntrezGene: | HPS5 |
HGNC: | 17022 |
UniProt: | Q9UPZ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.95e-35 | 76 |
bone element | 7.76e-32 | 82 |
skeletal element | 3.96e-28 | 90 |
immune system | 6.66e-27 | 93 |
hematopoietic system | 4.99e-25 | 98 |
blood island | 4.99e-25 | 98 |
skeletal system | 2.49e-24 | 100 |
hemolymphoid system | 8.37e-22 | 108 |
musculoskeletal system | 2.70e-17 | 167 |
omentum | 4.46e-11 | 6 |
peritoneum | 4.46e-11 | 6 |
abdominal cavity | 4.46e-11 | 6 |
visceral peritoneum | 4.46e-11 | 6 |
lateral plate mesoderm | 8.61e-11 | 203 |
connective tissue | 1.10e-08 | 371 |
mesoderm | 5.21e-08 | 315 |
mesoderm-derived structure | 5.21e-08 | 315 |
presumptive mesoderm | 5.21e-08 | 315 |