FFCP PHASE1:Hg19::chr11:64545917..64545928,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:64545917..64545928,- to FFCP PHASE1:Hg19::chr11:64545917..64545928,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7536 | |EntrezGene=7536 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12950 | |HGNC=12950 | ||
|TSSclassifier=strong | |||
|UniProt=Q15637 | |UniProt=Q15637 | ||
|association_with_transcript=9bp_to_NM_001178030,uc001oaz.1_5end | |||
|cluster_id=chr11:64545917..64545928,- | |||
|description=CAGE_peak_6_at_SF1_5end | |||
|id=chr11:64545917..64545928,- | |||
|ontology_enrichment_celltype=CL:0000988!7.20e-17!182;CL:0000037!1.09e-16!172;CL:0000566!1.09e-16!172;CL:0000738!6.59e-16!140;CL:0002032!1.38e-14!165;CL:0000837!1.38e-14!165;CL:0000542!3.64e-13!53;CL:0000051!3.64e-13!53;CL:0000838!7.36e-13!52;CL:0002087!5.90e-12!119;CL:0002031!5.81e-10!124;CL:0000791!4.83e-09!18;CL:0000789!4.83e-09!18;CL:0002420!4.83e-09!18;CL:0002419!4.83e-09!18;CL:0000790!4.83e-09!18;CL:0000084!1.07e-08!25;CL:0000827!1.07e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.53e-09;18!CL:0000789;5.53e-09;18!CL:0002419;5.53e-09;18!CL:0000084;1.74e-08;25!CL:0000542;2.16e-07;53!CL:0000094;5.32e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.66e-17,177;CL:0000037,3.17e-17,168;CL:0000738,4.74e-16,136;CL:0002032,3.78e-15,161;CL:0000837,3.78e-15,161;CL:0000542,3.37e-13,53;CL:0000051,3.37e-13,53;CL:0000838,7.04e-13,52;CL:0002087,8.60e-12,115;CL:0002031,8.57e-10,120;CL:0000791,1.86e-09,18;CL:0000789,1.86e-09,18;CL:0002420,1.86e-09,18;CL:0002419,1.86e-09,18;CL:0000790,1.86e-09,18;CL:0000084,8.20e-09,25;CL:0000827,8.20e-09,25;CL:0000094,8.62e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;5.53e-09;18!CL:0000051;2.16e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!1.09e-10!32;UBERON:0002619!3.67e-10!22;UBERON:0001893!1.68e-09!34;UBERON:0002020!2.72e-09!34;UBERON:0003528!2.72e-09!34;UBERON:0001950!3.71e-09!20;UBERON:0002791!5.49e-09!33;UBERON:0000956!6.04e-08!25;UBERON:0000203!6.04e-08!25;UBERON:0002780!1.65e-07!41;UBERON:0001890!1.65e-07!41;UBERON:0006240!1.65e-07!41;UBERON:0003080!8.21e-07!42;UBERON:0001049!9.54e-07!57;UBERON:0005068!9.54e-07!57;UBERON:0006241!9.54e-07!57;UBERON:0007135!9.54e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.23e-10;22!UBERON:0001869;8.73e-10;32!UBERON:0001950;2.22e-09;20!UBERON:0002791;5.68e-09;32!UBERON:0001893;9.01e-09;34!UBERON:0003528;1.89e-08;34!UBERON:0002020;1.89e-08;34!UBERON:0000956;2.46e-08;25!UBERON:0000203;2.46e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,3.38e-11,32;UBERON:0002619,1.77e-10,22;UBERON:0001893,4.79e-10,34;UBERON:0002791,7.87e-10,32;UBERON:0003528,7.96e-10,34;UBERON:0002020,7.96e-10,34;UBERON:0001950,2.02e-09,20;UBERON:0000073,7.70e-09,53;UBERON:0002616,7.70e-09,53;UBERON:0000956,2.65e-08,25;UBERON:0000203,2.65e-08,25;UBERON:0002780,4.44e-08,41;UBERON:0001890,4.44e-08,41;UBERON:0003080,4.44e-08,41;UBERON:0006240,4.44e-08,41;UBERON:0001049,9.24e-08,56;UBERON:0005068,9.24e-08,56;UBERON:0006241,9.24e-08,56;UBERON:0007135,9.24e-08,56;UBERON:0000955,1.73e-07,68;UBERON:0006238,1.73e-07,68 | |||
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| ||
|short_description=p6@SF1 | |||
}} | }} |
Latest revision as of 04:31, 19 September 2015
Short description: | p6@SF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_NM_001178030, uc001oaz.1_5end |
EntrezGene: | SF1 |
HGNC: | 12950 |
UniProt: | Q15637 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.66e-17 | 177 |
hematopoietic stem cell | 3.17e-17 | 168 |
leukocyte | 4.74e-16 | 136 |
hematopoietic oligopotent progenitor cell | 3.78e-15 | 161 |
hematopoietic multipotent progenitor cell | 3.78e-15 | 161 |
lymphocyte | 3.37e-13 | 53 |
common lymphoid progenitor | 3.37e-13 | 53 |
lymphoid lineage restricted progenitor cell | 7.04e-13 | 52 |
nongranular leukocyte | 8.60e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 8.57e-10 | 120 |
mature alpha-beta T cell | 1.86e-09 | 18 |
alpha-beta T cell | 1.86e-09 | 18 |
immature T cell | 1.86e-09 | 18 |
mature T cell | 1.86e-09 | 18 |
immature alpha-beta T cell | 1.86e-09 | 18 |
T cell | 8.20e-09 | 25 |
pro-T cell | 8.20e-09 | 25 |
granulocyte | 8.62e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 3.38e-11 | 32 |
regional part of cerebral cortex | 1.77e-10 | 22 |
telencephalon | 4.79e-10 | 34 |
regional part of telencephalon | 7.87e-10 | 32 |
brain grey matter | 7.96e-10 | 34 |
gray matter | 7.96e-10 | 34 |
neocortex | 2.02e-09 | 20 |
regional part of nervous system | 7.70e-09 | 53 |
regional part of brain | 7.70e-09 | 53 |
cerebral cortex | 2.65e-08 | 25 |
pallium | 2.65e-08 | 25 |
regional part of forebrain | 4.44e-08 | 41 |
forebrain | 4.44e-08 | 41 |
anterior neural tube | 4.44e-08 | 41 |
future forebrain | 4.44e-08 | 41 |
neural tube | 9.24e-08 | 56 |
neural rod | 9.24e-08 | 56 |
future spinal cord | 9.24e-08 | 56 |
neural keel | 9.24e-08 | 56 |
brain | 1.73e-07 | 68 |
future brain | 1.73e-07 | 68 |