FFCP PHASE1:Hg19::chr12:133287367..133287376,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:133287367..133287376,+ to FFCP PHASE1:Hg19::chr12:133287367..133287376,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=192111 | |EntrezGene=192111 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28763 | |HGNC=28763 | ||
|TSSclassifier=strong | |||
|UniProt=A9LN06,Q96HS1 | |UniProt=A9LN06,Q96HS1 | ||
|association_with_transcript=-16bp_to_NM_001170543,NM_001170544,NM_138575_5end | |||
|cluster_id=chr12:133287367..133287376,+ | |||
|description=CAGE_peak_4_at_PGAM5_5end | |||
|id=chr12:133287367..133287376,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.33e-22!254;CL:0002321!1.50e-11!248;CL:0000220!6.88e-11!246;CL:0002076!1.67e-07!43;CL:0000223!4.12e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002681;5.71e-10;12!CL:0002584;5.71e-10;12!CL:1000746;1.35e-09;7!CL:1000612;1.35e-09;7!CL:1000449;2.91e-09;15!CL:1000497;8.20e-08;17!CL:0002518;8.20e-08;17!CL:0002188;1.74e-07;5!CL:0002202;5.35e-07;9!CL:0002632;5.35e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.45e-18,253;CL:0002681,2.20e-10,12;CL:0002584,2.20e-10,12;CL:1000746,7.45e-10,7;CL:1000612,7.45e-10,7;CL:1000449,1.31e-09,15;CL:0002321,2.90e-09,250;CL:1000497,4.14e-08,17;CL:0002518,4.14e-08,17;CL:0002076,6.51e-08,42;CL:0002188,1.15e-07,5;CL:0000223,1.21e-07,58;CL:0002202,8.08e-07,9;CL:0002632,8.08e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.03e-15!235;DOID:14566!1.67e-14!239;DOID:305!5.62e-12!106;DOID:0050687!1.13e-11!143;DOID:0050686!1.57e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!4.48e-09!169;UBERON:0000925!4.48e-09!169;UBERON:0006595!4.48e-09!169;UBERON:0004921!6.34e-08!129;UBERON:0004185!6.34e-08!129;UBERON:0000077!1.27e-07!130;UBERON:0003104!1.32e-07!238;UBERON:0009142!1.32e-07!238;UBERON:0001007!2.14e-07!155;UBERON:0001555!2.14e-07!155;UBERON:0007026!2.14e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001225;5.71e-10;12!UBERON:0008987;5.71e-10;12!UBERON:0006554;8.60e-10;30!UBERON:0001008;8.60e-10;30!UBERON:0000074;1.35e-09;7!UBERON:0001229;1.35e-09;7!UBERON:0006555;2.91e-09;15!UBERON:0004819;2.91e-09;15!UBERON:0001285;2.91e-09;15!UBERON:0007684;2.91e-09;15!UBERON:0002113;3.05e-09;24!UBERON:0011143;3.05e-09;24!UBERON:0001851;5.86e-09;15!UBERON:0000353;1.95e-07;15!UBERON:0000489;6.36e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001225,2.20e-10,12;UBERON:0008987,2.20e-10,12;UBERON:0010532,7.45e-10,7;UBERON:0000074,7.45e-10,7;UBERON:0001229,7.45e-10,7;UBERON:0001230,7.45e-10,7;UBERON:0003220,7.45e-10,7;UBERON:0005749,7.45e-10,7;UBERON:0004199,7.45e-10,7;UBERON:0004209,7.45e-10,7;UBERON:0004198,7.45e-10,7;UBERON:0004211,1.31e-09,15;UBERON:0009773,1.31e-09,15;UBERON:0001231,1.31e-09,15;UBERON:0001285,1.31e-09,15;UBERON:0007684,1.31e-09,15;UBERON:0004208,1.31e-09,15;UBERON:0001851,4.12e-09,15;UBERON:0005177,4.13e-09,101;UBERON:0006554,5.71e-09,47;UBERON:0006555,8.25e-09,16;UBERON:0004819,8.25e-09,16;UBERON:0001008,1.21e-08,48;UBERON:0005103,2.06e-08,8;UBERON:0000083,2.06e-08,8;UBERON:0009201,2.06e-08,8;UBERON:0006553,2.06e-08,8;UBERON:0003074,2.06e-08,8;UBERON:0003060,2.06e-08,8;UBERON:0002113,2.22e-08,26;UBERON:0003918,2.22e-08,26;UBERON:0011143,2.22e-08,26;UBERON:0005095,2.22e-08,26;UBERON:0007687,2.22e-08,26;UBERON:0000353,9.41e-08,15;UBERON:0000080,2.69e-07,9;UBERON:0002120,2.69e-07,9;UBERON:0004875,2.69e-07,9;UBERON:0005721,2.69e-07,9;UBERON:0005754,2.69e-07,9;UBERON:0007297,2.69e-07,9 | |||
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| ||
|short_description=p4@PGAM5 | |||
}} | }} |
Latest revision as of 11:15, 17 September 2015
Short description: | p4@PGAM5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PGAM5_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_NM_001170543, NM_001170544, NM_138575_5end |
EntrezGene: | PGAM5 |
HGNC: | 28763 |
UniProt: | A9LN06Q96HS1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.45e-18 | 253 |
kidney cortical cell | 2.20e-10 | 12 |
renal cortical epithelial cell | 2.20e-10 | 12 |
glomerular cell | 7.45e-10 | 7 |
kidney corpuscule cell | 7.45e-10 | 7 |
epithelial cell of nephron | 1.31e-09 | 15 |
embryonic cell | 2.90e-09 | 250 |
kidney cell | 4.14e-08 | 17 |
kidney epithelial cell | 4.14e-08 | 17 |
endo-epithelial cell | 6.51e-08 | 42 |
glomerular endothelial cell | 1.15e-07 | 5 |
endodermal cell | 1.21e-07 | 58 |
epithelial cell of tracheobronchial tree | 8.08e-07 | 9 |
epithelial cell of lower respiratory tract | 8.08e-07 | 9 |