FFCP PHASE1:Hg19::chr14:36982998..36983015,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=253970 | |EntrezGene=253970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18387 | |HGNC=18387 | ||
|TSSclassifier=strong | |||
|UniProt=P0C7M3 | |UniProt=P0C7M3 | ||
|association_with_transcript=-8bp_to_NM_001101341,uc001wtq.2,uc001wtr.2_5end | |||
|cluster_id=chr14:36982998..36983015,- | |||
|coexpression_cluster_id=C131 | |||
|description=CAGE_peak_5_at_SFTA3_5end | |||
|id=chr14:36982998..36983015,- | |||
|ontology_enrichment_celltype=CL:0002553!2.82e-09!1;CL:0000082!8.81e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.07e-14;1!CL:0000082;1.99e-11;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.23e-14,1;CL:0000082,2.25e-11,19 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.19e-24;5!UBERON:0008947;4.96e-22;29!UBERON:0001041;2.78e-21;30!UBERON:0000358;1.41e-14;1 | |||
|ontology_enrichment_disease=DOID:3112!7.27e-09!1;DOID:1324!1.45e-08!15;DOID:3905!2.20e-08!9;DOID:0050615!4.91e-08!16;DOID:3908!3.25e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:1324;2.13e-14;15!DOID:3905;8.21e-14;9!DOID:0050615;1.62e-13;16!DOID:3908;1.35e-11;5!DOID:1325;2.15e-08;7!DOID:3904;2.15e-08;7!DOID:3910;7.78e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,2.49e-14,15;DOID:3905,9.57e-14,9;DOID:0050615,1.87e-13,16;DOID:3908,1.58e-11,5;DOID:1325,2.40e-08,7;DOID:3904,2.40e-08,7;DOID:3910,9.19e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002046!3.08e-25!5;UBERON:0004117!3.08e-25!5;UBERON:0007689!3.08e-25!5;UBERON:0007123!3.08e-25!5;UBERON:0003091!3.08e-25!5;UBERON:0002048!6.63e-17!22;UBERON:0000117!6.63e-17!22;UBERON:0000171!6.63e-17!22;UBERON:0000170!6.63e-17!22;UBERON:0005597!6.63e-17!22;UBERON:0000118!6.63e-17!22;UBERON:0005911!9.28e-14!82;UBERON:0005178!1.04e-13!34;UBERON:0002224!1.04e-13!34;UBERON:0005181!2.75e-13!35;UBERON:0005153!1.42e-12!37;UBERON:0008947!3.75e-12!38;UBERON:0003258!3.75e-12!38;UBERON:0009722!1.36e-11!11;UBERON:0007690!1.36e-11!11;UBERON:0002171!1.74e-09!1;UBERON:0006518!1.74e-09!1;UBERON:0008949!1.74e-09!1;UBERON:0000101!1.74e-09!1;UBERON:0002167!1.74e-09!1;UBERON:0005157!8.08e-09!51;UBERON:0001874!8.49e-09!1;UBERON:0000915!1.38e-08!52;UBERON:0008814!1.54e-08!15;UBERON:0001007!2.08e-08!155;UBERON:0001555!2.08e-08!155;UBERON:0007026!2.08e-08!155;UBERON:0000065!2.11e-08!53;UBERON:0004119!1.72e-07!169;UBERON:0000925!1.72e-07!169;UBERON:0006595!1.72e-07!169;UBERON:0000464!3.76e-07!104;UBERON:0005177!6.71e-07!107;UBERON:0004802!8.81e-07!19;UBERON:0000115!8.81e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0002048;3.59e-29;22!UBERON:0000117;3.59e-29;22!UBERON:0000171;3.59e-29;22!UBERON:0000170;3.59e-29;22!UBERON:0002046;2.19e-24;5!UBERON:0005178;4.79e-16;34!UBERON:0002224;4.79e-16;34!UBERON:0002171;5.42e-15;1!UBERON:0006518;5.42e-15;1!UBERON:0008949;5.42e-15;1!UBERON:0000101;5.42e-15;1!UBERON:0002167;5.42e-15;1!UBERON:0005181;1.52e-14;35!UBERON:0004802;1.99e-11;19!UBERON:0000115;1.99e-11;19!UBERON:0000065;7.89e-11;44!UBERON:0004807;6.64e-10;22!UBERON:0000341;4.23e-08;2!UBERON:0000915;6.63e-08;52!UBERON:0004903;7.78e-08;2!UBERON:0002173;7.78e-08;2!UBERON:0002186;7.78e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,4.34e-29,22;UBERON:0000117,4.34e-29,22;UBERON:0000171,4.34e-29,22;UBERON:0000170,4.34e-29,22;UBERON:0005597,4.34e-29,22;UBERON:0000118,4.34e-29,22;UBERON:0002046,1.65e-24,5;UBERON:0004117,1.65e-24,5;UBERON:0007689,1.65e-24,5;UBERON:0007123,1.65e-24,5;UBERON:0003091,1.65e-24,5;UBERON:0005178,1.13e-18,34;UBERON:0002224,1.13e-18,34;UBERON:0005181,3.99e-18,35;UBERON:0005153,4.04e-17,37;UBERON:0008947,1.18e-16,38;UBERON:0003258,1.18e-16,38;UBERON:0005911,4.03e-15,82;UBERON:0002171,5.42e-15,1;UBERON:0006518,5.42e-15,1;UBERON:0008949,5.42e-15,1;UBERON:0000101,5.42e-15,1;UBERON:0002167,5.42e-15,1;UBERON:0005157,2.27e-13,47;UBERON:0000915,4.93e-12,52;UBERON:0000065,1.44e-11,54;UBERON:0009722,1.70e-11,11;UBERON:0007690,1.70e-11,11;UBERON:0004802,2.25e-11,19;UBERON:0000115,2.25e-11,19;UBERON:0001004,2.75e-08,74;UBERON:0000341,4.09e-08,2;UBERON:0001007,5.56e-08,145;UBERON:0001555,5.56e-08,145;UBERON:0007026,5.56e-08,145;UBERON:0004807,8.58e-08,28;UBERON:0004903,9.19e-08,2;UBERON:0002173,9.19e-08,2;UBERON:0002186,9.19e-08,2;UBERON:0005177,1.17e-07,101;UBERON:0008814,3.11e-07,18;UBERON:0001048,3.55e-07,160;UBERON:0004119,4.01e-07,160;UBERON:0000925,4.01e-07,160;UBERON:0006595,4.01e-07,160;UBERON:0001041,5.87e-07,87;UBERON:0009569,8.00e-07,112 | |||
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|short_description=p5@SFTA3 | |||
}} | }} |
Latest revision as of 22:21, 19 September 2015
Short description: | p5@SFTA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SFTA3_5end |
Coexpression cluster: | C131_lung_trachea_Alveolar_thyroid_umbilical_throat_skin |
Association with transcript: | -8bp_to_NM_001101341, uc001wtq.2, uc001wtr.2_5end |
EntrezGene: | SFTA3 |
HGNC: | 18387 |
UniProt: | P0C7M3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.23e-14 | 1 |
epithelial cell of lung | 2.25e-11 | 19 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 2.49e-14 | 15 |
lung carcinoma | 9.57e-14 | 9 |
respiratory system cancer | 1.87e-13 | 16 |
non-small cell lung carcinoma | 1.58e-11 | 5 |
bronchus cancer | 2.40e-08 | 7 |
bronchogenic carcinoma | 2.40e-08 | 7 |
lung adenocarcinoma | 9.19e-08 | 2 |