FFCP PHASE1:Hg19::chr16:55539240..55539261,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:55539240..55539261,+ to FFCP PHASE1:Hg19::chr16:55539240..55539261,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:55539240..55539261,+ | |||
|coexpression_cluster_id=C351 | |||
|description=CAGE_peak_at_chr16:55539240..55539261,+ | |||
|id=chr16:55539240..55539261,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.98e-43!180;CL:0000057!1.22e-20!75;CL:0000680!2.29e-18!57;CL:0000056!2.29e-18!57;CL:0000355!2.29e-18!57;CL:0000183!1.26e-17!59;CL:0000187!6.33e-17!54;CL:0000192!3.65e-16!42;CL:0000514!3.65e-16!42;CL:0000393!1.10e-15!60;CL:0000211!1.10e-15!60;CL:0000222!4.19e-14!119;CL:0002371!5.80e-13!591;CL:0000359!4.09e-12!32;CL:0000144!6.25e-12!625;CL:0000048!1.06e-09!430;CL:0000723!3.76e-09!436;CL:0002334!7.12e-09!12;CL:0000034!1.14e-08!444;CL:0002620!1.32e-08!23;CL:0000220!2.58e-08!246;CL:0002321!5.75e-08!248;CL:0002539!2.34e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000192;1.52e-13;43!CL:0000359;2.29e-12;32!CL:0002334;3.03e-11;12!CL:0000187;1.83e-09;55!CL:0002539;2.43e-09;10!CL:0002620;7.81e-09;23!CL:0000499;2.22e-08;28!CL:0000134;2.49e-08;55!CL:0002320;3.59e-08;188!CL:0000723;5.79e-08;61!CL:0000057;6.30e-08;73!CL:0000048;6.71e-08;58!CL:0000393;5.77e-07;61!CL:0000211;5.77e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.33e-20,76;CL:0000680,3.93e-19,58;CL:0000056,3.93e-19,58;CL:0000355,3.93e-19,58;CL:0000192,8.69e-19,43;CL:0000514,8.69e-19,43;CL:0000048,6.74e-18,427;CL:0000187,2.56e-17,55;CL:0000723,5.72e-17,433;CL:0000034,8.80e-16,441;CL:0000393,3.17e-14,61;CL:0000211,3.17e-14,61;CL:0000359,6.86e-13,32;CL:0002334,2.23e-11,12;CL:0000222,2.35e-11,121;CL:0002539,2.40e-09,10;CL:0002620,7.29e-09,23;CL:0000499,2.81e-08,28;CL:0002320,3.50e-08,361;CL:0000134,5.47e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000514;1.52e-13;43!CL:0000355;8.07e-10;58 | |||
|ontology_enrichment_disease=DOID:2394!1.69e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;8.53e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.97e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.52e-19!83;UBERON:0002329!4.52e-19!83;UBERON:0003077!4.52e-19!83;UBERON:0003059!4.52e-19!83;UBERON:0007282!4.52e-19!83;UBERON:0009618!4.52e-19!83;UBERON:0007285!4.52e-19!83;UBERON:0000486!1.64e-18!82;UBERON:0004290!2.00e-18!70;UBERON:0001134!1.70e-17!61;UBERON:0002036!1.70e-17!61;UBERON:0003082!1.70e-17!61;UBERON:0002385!1.02e-16!63;UBERON:0001015!1.02e-16!63;UBERON:0000383!1.02e-16!63;UBERON:0004872!1.16e-16!84;UBERON:0005256!1.92e-15!143;UBERON:0001637!9.80e-15!42;UBERON:0003509!9.80e-15!42;UBERON:0004572!9.80e-15!42;UBERON:0001981!4.07e-14!60;UBERON:0007500!4.07e-14!60;UBERON:0004537!4.07e-14!60;UBERON:0006965!4.07e-14!60;UBERON:0004573!5.94e-14!33;UBERON:0004571!5.94e-14!33;UBERON:0002049!5.20e-12!79;UBERON:0007798!5.20e-12!79;UBERON:0003914!1.32e-11!118;UBERON:0002100!8.52e-11!216;UBERON:0000055!1.09e-10!69;UBERON:0000490!1.73e-10!138;UBERON:0001009!3.92e-10!113;UBERON:0004535!7.62e-10!110;UBERON:0000947!8.25e-10!21;UBERON:0010191!8.25e-10!21;UBERON:0000475!4.93e-08!365;UBERON:0002199!6.55e-08!45;UBERON:0002416!6.55e-08!45;UBERON:0001013!1.55e-07!14;UBERON:0003102!1.75e-07!95;UBERON:0004237!2.34e-07!10;UBERON:0004695!2.34e-07!10;UBERON:0002111!2.34e-07!10;UBERON:0004178!2.34e-07!10;UBERON:0000468!2.69e-07!659;UBERON:0001135!3.26e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.42e-12;33!UBERON:0004571;2.42e-12;33!UBERON:0001637;1.44e-10;42!UBERON:0003509;1.44e-10;42!UBERON:0004572;1.44e-10;42!UBERON:0000947;3.07e-10;21!UBERON:0010191;3.07e-10;21!UBERON:0004237;2.43e-09;10!UBERON:0004695;2.43e-09;10!UBERON:0002111;2.43e-09;10!UBERON:0004178;2.43e-09;10!UBERON:0004457;5.10e-09;9!UBERON:0000042;5.10e-09;9!UBERON:0002384;7.36e-09;198!UBERON:0001135;9.73e-09;15!UBERON:0002385;2.59e-08;31!UBERON:0001015;2.59e-08;31!UBERON:0000383;2.59e-08;31!UBERON:0001013;1.36e-07;14!UBERON:0007500;2.72e-07;56!UBERON:0001981;2.72e-07;56!UBERON:0004537;2.72e-07;56!UBERON:0003688;8.32e-07;6!UBERON:0002358;8.32e-07;6!UBERON:0003684;8.32e-07;6!UBERON:0001178;8.32e-07;6 | |||
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| ||
|short_description=p@chr16:55539240..55539261,+ | |||
}} | }} |
Latest revision as of 09:52, 25 July 2015
Short description: | p@chr16:55539240..55539261, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:55539240..55539261, + |
Coexpression cluster: | C351_Fibroblast_Smooth_mesenchymal_Adipocyte_tenocyte_Synoviocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.33e-20 | 76 |
muscle precursor cell | 3.93e-19 | 58 |
myoblast | 3.93e-19 | 58 |
multi-potent skeletal muscle stem cell | 3.93e-19 | 58 |
smooth muscle cell | 8.69e-19 | 43 |
smooth muscle myoblast | 8.69e-19 | 43 |
multi fate stem cell | 6.74e-18 | 427 |
muscle cell | 2.56e-17 | 55 |
somatic stem cell | 5.72e-17 | 433 |
stem cell | 8.80e-16 | 441 |
electrically responsive cell | 3.17e-14 | 61 |
electrically active cell | 3.17e-14 | 61 |
vascular associated smooth muscle cell | 6.86e-13 | 32 |
preadipocyte | 2.23e-11 | 12 |
mesodermal cell | 2.35e-11 | 121 |
aortic smooth muscle cell | 2.40e-09 | 10 |
skin fibroblast | 7.29e-09 | 23 |
stromal cell | 2.81e-08 | 28 |
connective tissue cell | 3.50e-08 | 361 |
mesenchymal cell | 5.47e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.97e-10 | 14 |