FFCP PHASE1:Hg19::chr17:73724438..73724471,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:73724438..73724471,+ to FFCP PHASE1:Hg19::chr17:73724438..73724471,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:73724438..73724471,+ | |||
|coexpression_cluster_id=C571 | |||
|description=CAGE_peak_at_chr17:73724438..73724471,+ | |||
|id=chr17:73724438..73724471,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.15e-26!254;CL:0002076!5.72e-21!43;CL:0000223!1.84e-16!59;CL:0002251!3.38e-12!21;CL:0002368!3.04e-09!13;CL:0000076!1.61e-07!62;CL:0002159!3.51e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.48e-27;42!CL:0002368;6.88e-23;13!CL:0002159;2.77e-16;14!CL:0002251;1.56e-13;20!CL:0000622;1.40e-12;5!CL:0000307;2.52e-12;3!CL:0002202;5.93e-11;9!CL:0002632;5.93e-11;9!CL:0000362;1.49e-10;9!CL:0000154;1.72e-10;6!CL:0000240;2.14e-10;6!CL:0000311;2.14e-10;6!CL:0000079;2.14e-10;6!CL:0000237;2.14e-10;6!CL:0000150;2.22e-10;9!CL:0000244;6.68e-10;4!CL:0000731;6.68e-10;4!CL:0002575;4.27e-09;2!CL:0002327;4.80e-09;4!CL:0000317;6.07e-09;2!CL:1000448;6.07e-09;2!CL:0002308;6.07e-09;2!CL:0002140;6.07e-09;2!CL:0000575;1.82e-08;2!CL:0000312;2.23e-07;5!CL:0002077;5.35e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.25e-35,42;CL:0000223,2.34e-26,58;CL:0002368,6.94e-23,13;CL:0000066,3.46e-18,253;CL:0002159,3.10e-16,14;CL:0002251,1.15e-13,20;CL:0000622,1.06e-12,5;CL:0000068,2.39e-12,3;CL:0000069,2.39e-12,3;CL:0000307,2.39e-12,3;CL:0000377,2.39e-12,3;CL:0002321,5.90e-12,250;CL:0002202,5.71e-11,9;CL:0002632,5.71e-11,9;CL:0000154,1.36e-10,6;CL:0000362,1.84e-10,9;CL:0000150,2.29e-10,9;CL:0000240,2.78e-10,6;CL:0000311,2.78e-10,6;CL:0000079,2.78e-10,6;CL:0000237,2.78e-10,6;CL:0000036,2.78e-10,6;CL:0000357,2.78e-10,6;CL:0000114,2.78e-10,6;CL:0000244,7.21e-10,4;CL:0000731,7.21e-10,4;CL:0000076,7.29e-10,63;CL:0002575,4.28e-09,2;CL:0002327,5.61e-09,4;CL:0000317,5.63e-09,2;CL:1000448,5.63e-09,2;CL:0002308,5.63e-09,2;CL:0002140,5.63e-09,2;CL:0000575,1.42e-08,2;CL:0002077,1.74e-07,34;CL:0000312,2.91e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;1.79e-14;58!CL:0000377;2.52e-12;3!CL:0000357;2.14e-10;6!CL:0000114;2.14e-10;6 | |||
|ontology_enrichment_disease=DOID:305!1.63e-11!106;DOID:1749!2.47e-08!14;DOID:299!4.62e-08!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.17e-17!169;UBERON:0000924!4.17e-16!173;UBERON:0006601!4.17e-16!173;UBERON:0000033!6.30e-16!123;UBERON:0000064!1.63e-15!219;UBERON:0003075!4.31e-15!86;UBERON:0007284!4.31e-15!86;UBERON:0000153!5.01e-15!129;UBERON:0007811!5.01e-15!129;UBERON:0001049!4.73e-14!57;UBERON:0005068!4.73e-14!57;UBERON:0006241!4.73e-14!57;UBERON:0007135!4.73e-14!57;UBERON:0002346!8.66e-14!90;UBERON:0004119!5.74e-13!169;UBERON:0000925!5.74e-13!169;UBERON:0006595!5.74e-13!169;UBERON:0002616!6.77e-12!59;UBERON:0005743!1.76e-10!86;UBERON:0000955!9.12e-10!69;UBERON:0006238!9.12e-10!69;UBERON:0003076!1.25e-09!15;UBERON:0003057!1.25e-09!15;UBERON:0000062!1.74e-09!511;UBERON:0003056!1.90e-09!61;UBERON:0001017!2.69e-09!82;UBERON:0002020!4.39e-09!34;UBERON:0003528!4.39e-09!34;UBERON:0001004!8.54e-09!72;UBERON:0004733!1.02e-08!12;UBERON:0002028!1.02e-08!12;UBERON:0007277!1.02e-08!12;UBERON:0002791!1.55e-08!33;UBERON:0007023!1.87e-08!115;UBERON:0000073!1.98e-08!94;UBERON:0001016!1.98e-08!94;UBERON:0000481!2.12e-08!347;UBERON:0001007!3.12e-08!155;UBERON:0001555!3.12e-08!155;UBERON:0007026!3.12e-08!155;UBERON:0001893!4.00e-08!34;UBERON:0000475!4.15e-08!365;UBERON:0000063!7.01e-08!97;UBERON:0004732!7.92e-08!13;UBERON:0002780!1.42e-07!41;UBERON:0001890!1.42e-07!41;UBERON:0006240!1.42e-07!41;UBERON:0005910!1.95e-07!6;UBERON:0003080!2.96e-07!42;UBERON:0001869!6.38e-07!32;UBERON:0000956!7.00e-07!25;UBERON:0000203!7.00e-07!25;UBERON:0000365!8.77e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;4.80e-09;4!UBERON:0002419;6.07e-09;2!UBERON:0007771;6.07e-09;2!UBERON:0003297;6.07e-09;2!UBERON:0001821;6.07e-09;2!UBERON:0003487;6.07e-09;2!UBERON:0001820;6.07e-09;2!UBERON:0001954;1.82e-08;2!UBERON:0003022;1.82e-08;2!UBERON:0002421;1.82e-08;2!UBERON:0002600;1.82e-08;2!UBERON:0000365;5.42e-08;5!UBERON:0000486;6.36e-08;12!UBERON:0003729;5.67e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,1.82e-09,74;UBERON:0001911,5.61e-09,4;UBERON:0005333,5.61e-09,4;UBERON:0008425,5.61e-09,4;UBERON:0005311,5.61e-09,4;UBERON:0002419,5.63e-09,2;UBERON:0007771,5.63e-09,2;UBERON:0003297,5.63e-09,2;UBERON:0001821,5.63e-09,2;UBERON:0003487,5.63e-09,2;UBERON:0001820,5.63e-09,2;UBERON:0005089,5.63e-09,2;UBERON:0005088,5.63e-09,2;UBERON:0001954,1.66e-08,2;UBERON:0003022,1.66e-08,2;UBERON:0002421,1.66e-08,2;UBERON:0002600,1.66e-08,2;UBERON:0010371,2.57e-08,104;UBERON:0003102,4.13e-08,99;UBERON:0000365,5.76e-08,5;UBERON:0004119,6.58e-08,160;UBERON:0000925,6.58e-08,160;UBERON:0006595,6.58e-08,160;UBERON:0003729,4.23e-07,13 | |||
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| ||
|short_description=p@chr17:73724438..73724471,+ | |||
}} | }} |
Latest revision as of 21:11, 25 July 2015
Short description: | p@chr17:73724438..73724471, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:73724438..73724471, + |
Coexpression cluster: | C571_Bronchial_Prostate_Small_Tracheal_Mallassezderived_Urothelial_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory system | 1.82e-09 | 74 |
mammary gland | 5.61e-09 | 4 |
mammary bud | 5.61e-09 | 4 |
mammary ridge | 5.61e-09 | 4 |
mammary placode | 5.61e-09 | 4 |
skin gland | 5.63e-09 | 2 |
epidermis gland | 5.63e-09 | 2 |
gland of integumental system | 5.63e-09 | 2 |
sebaceous gland | 5.63e-09 | 2 |
skin sebaceous gland | 5.63e-09 | 2 |
sweat gland | 5.63e-09 | 2 |
sweat gland placode | 5.63e-09 | 2 |
sebaceous gland placode | 5.63e-09 | 2 |
Ammon's horn | 1.66e-08 | 2 |
lobe parts of cerebral cortex | 1.66e-08 | 2 |
hippocampal formation | 1.66e-08 | 2 |
limbic lobe | 1.66e-08 | 2 |
ecto-epithelium | 2.57e-08 | 104 |
surface structure | 4.13e-08 | 99 |
urothelium | 5.76e-08 | 5 |
endoderm-derived structure | 6.58e-08 | 160 |
endoderm | 6.58e-08 | 160 |
presumptive endoderm | 6.58e-08 | 160 |
mouth mucosa | 4.23e-07 | 13 |