FFCP PHASE1:Hg19::chr19:45451730..45451756,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:45451730..45451756,+ to FFCP PHASE1:Hg19::chr19:45451730..45451756,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=344 | |EntrezGene=344 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=609 | |HGNC=609 | ||
|TSSclassifier=strong | |||
|UniProt=P02655 | |UniProt=P02655 | ||
|association_with_transcript=0bp_to_BT006708,EU832654,EU832732,X00568_5end | |||
|cluster_id=chr19:45451730..45451756,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_APOC2_5end | |||
|id=chr19:45451730..45451756,+ | |||
|ontology_enrichment_celltype=CL:0000453!2.01e-12!5;CL:0000181!1.70e-10!12;CL:0000417!1.70e-10!12;CL:0000668!1.70e-10!12;CL:0000414!1.70e-10!12;CL:0000412!1.70e-10!12;CL:0000182!1.70e-10!12;CL:0000990!1.89e-09!8;CL:0000451!1.35e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.73e-18;12!CL:0000235;1.01e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.57e-18,12;CL:0000235,9.68e-10,6 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.25e-14;1!UBERON:0004161;1.37e-11;11!UBERON:0009497;6.80e-10;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;7.78e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,9.19e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!6.96e-30!57;UBERON:0005068!6.96e-30!57;UBERON:0006241!6.96e-30!57;UBERON:0007135!6.96e-30!57;UBERON:0002020!2.63e-25!34;UBERON:0003528!2.63e-25!34;UBERON:0002616!3.51e-24!59;UBERON:0002791!1.42e-23!33;UBERON:0001893!9.61e-23!34;UBERON:0002780!2.32e-22!41;UBERON:0001890!2.32e-22!41;UBERON:0006240!2.32e-22!41;UBERON:0007023!5.04e-22!115;UBERON:0002308!1.01e-21!9;UBERON:0000125!1.01e-21!9;UBERON:0003080!1.06e-21!42;UBERON:0001017!3.21e-21!82;UBERON:0000955!4.93e-21!69;UBERON:0006238!4.93e-21!69;UBERON:0005743!7.41e-20!86;UBERON:0001869!2.26e-19!32;UBERON:0000073!1.06e-18!94;UBERON:0001016!1.06e-18!94;UBERON:0003075!1.40e-18!86;UBERON:0007284!1.40e-18!86;UBERON:0009663!1.37e-17!7;UBERON:0002346!2.13e-17!90;UBERON:0002420!3.73e-17!9;UBERON:0007245!3.73e-17!9;UBERON:0010009!3.73e-17!9;UBERON:0010011!3.73e-17!9;UBERON:0000454!3.73e-17!9;UBERON:0002298!4.44e-14!8;UBERON:0003056!3.02e-13!61;UBERON:0002619!3.42e-12!22;UBERON:0000025!8.31e-11!194;UBERON:0000369!1.31e-10!4;UBERON:0002435!1.31e-10!4;UBERON:0000204!1.31e-10!4;UBERON:0010082!1.31e-10!4;UBERON:0000956!1.77e-10!25;UBERON:0000203!1.77e-10!25;UBERON:0002107!2.45e-10!19;UBERON:0006925!2.45e-10!19;UBERON:0008836!2.45e-10!19;UBERON:0005057!4.20e-10!26;UBERON:0000033!1.51e-09!123;UBERON:0000153!1.53e-09!129;UBERON:0007811!1.53e-09!129;UBERON:0003076!2.72e-09!15;UBERON:0003057!2.72e-09!15;UBERON:0001950!4.18e-09!20;UBERON:0008835!1.17e-08!22;UBERON:0003894!1.17e-08!22;UBERON:0005383!1.30e-08!3;UBERON:0005382!1.30e-08!3;UBERON:0004732!2.30e-08!13;UBERON:0009854!3.37e-08!23;UBERON:0000349!3.93e-08!5;UBERON:0006331!4.23e-08!3;UBERON:0001896!4.79e-08!3;UBERON:0005290!4.79e-08!3;UBERON:0010096!4.79e-08!3;UBERON:0004121!1.13e-07!169;UBERON:0000988!1.32e-07!3;UBERON:0007499!2.17e-07!25;UBERON:0009497!2.17e-07!25;UBERON:0000015!2.17e-07!25;UBERON:0002423!2.17e-07!25;UBERON:0006235!2.17e-07!25;UBERON:0004161!2.17e-07!25;UBERON:0000924!2.53e-07!173;UBERON:0006601!2.53e-07!173;UBERON:0009856!4.92e-07!26;UBERON:0004111!7.68e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.48e-25;19!UBERON:0006925;3.48e-25;19!UBERON:0002423;4.30e-19;25!UBERON:0002365;2.10e-15;31!UBERON:0002330;2.10e-15;31!UBERON:0000941;2.25e-14;1!UBERON:0001785;2.25e-14;1!UBERON:0002464;2.25e-14;1!UBERON:0004904;2.25e-14;1!UBERON:0001021;2.25e-14;1!UBERON:0002368;2.47e-13;33!UBERON:0000949;2.15e-09;43!UBERON:0003714;7.78e-08;2!UBERON:0005162;7.78e-08;2!UBERON:0000122;7.78e-08;2!UBERON:0005172;6.21e-07;52!UBERON:0005173;6.21e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.41e-25,19;UBERON:0006925,3.41e-25,19;UBERON:0008836,3.41e-25,19;UBERON:0008835,9.85e-22,22;UBERON:0003894,9.85e-22,22;UBERON:0009854,8.85e-21,23;UBERON:0007499,4.23e-19,25;UBERON:0009497,4.23e-19,25;UBERON:0000015,4.23e-19,25;UBERON:0002423,4.23e-19,25;UBERON:0006235,4.23e-19,25;UBERON:0004161,4.23e-19,25;UBERON:0009856,2.34e-18,26;UBERON:0002365,2.34e-15,31;UBERON:0002330,2.34e-15,31;UBERON:0000941,1.61e-14,1;UBERON:0001785,1.61e-14,1;UBERON:0002464,1.61e-14,1;UBERON:0004904,1.61e-14,1;UBERON:0001021,1.61e-14,1;UBERON:0003902,1.61e-14,1;UBERON:0005425,1.61e-14,1;UBERON:0002368,1.43e-13,35;UBERON:0000949,1.73e-10,45;UBERON:0003929,1.10e-08,54;UBERON:0005172,1.10e-08,54;UBERON:0005173,1.10e-08,54;UBERON:0002530,6.45e-08,59;UBERON:0003714,6.58e-08,2;UBERON:0005162,6.58e-08,2;UBERON:0000122,6.58e-08,2;UBERON:0002417,8.86e-08,60;UBERON:0000916,8.86e-08,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.1536580090211,26.5363348502959,51.3987218812822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17002132569619,0.743155811443641,0,0,0,0,0,0,0,0.176096868026452,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.3480888653397,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.3246824089536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12318871245384,0,0,0,0,0.642352300414798,0.201799707191048,0,0,0.307240764308458,0,0.667396566847634,0,1.11362469558097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,2.55786185113436,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0.498635045700469,0.225595660617181,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0.600420288709789,0.821432273351958,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.551482276150566,0.659326867049332,0.674035438541849,0,0,0.795229689809303,0.408610218334727,0,0,0,0.449947783103001,0.77380195455795,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,68.2933408939864,29.1515155606887,0.129282956361551,0.52893040697076,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0.573409195690071,0.443716206147409,0.124192805882767,0,0,1.06154382279153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0.194860308839388,0.132864840313363,0.490696182767533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0.205116364240755,0,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0.785577949580009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0.218559560503957,0,0,0,0.981542335574726,0.594092800654172,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.573358332605805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.1536580090211,26.5363348502959,51.3987218812822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17002132569619,0.743155811443641,0,0,0,0,0,0,0,0.176096868026452,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.3480888653397,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.3246824089536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12318871245384,0,0,0,0,0.642352300414798,0.201799707191048,0,0,0.307240764308458,0,0.667396566847634,0,1.11362469558097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,2.55786185113436,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0.498635045700469,0.225595660617181,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0.600420288709789,0.821432273351958,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.551482276150566,0.659326867049332,0.674035438541849,0,0,0.795229689809303,0.408610218334727,0,0,0,0.449947783103001,0.77380195455795,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,68.2933408939864,29.1515155606887,0.129282956361551,0.52893040697076,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0.573409195690071,0.443716206147409,0.124192805882767,0,0,1.06154382279153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0.194860308839388,0.132864840313363,0.490696182767533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0.205116364240755,0,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0.785577949580009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0.218559560503957,0,0,0,0.981542335574726,0.594092800654172,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.573358332605805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@APOC2 | |||
}} | }} |
Latest revision as of 15:09, 18 September 2015
Short description: | p4@APOC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_APOC2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_BT006708, EU832654, EU832732, X00568_5end |
EntrezGene: | APOC2 |
HGNC: | 609 |
UniProt: | P02655 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.57e-18 | 12 |
macrophage | 9.68e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
liver | 3.41e-25 | 19 |
digestive gland | 3.41e-25 | 19 |
liver bud | 3.41e-25 | 19 |
hepatic diverticulum | 9.85e-22 | 22 |
liver primordium | 9.85e-22 | 22 |
digestive tract diverticulum | 8.85e-21 | 23 |
epithelial sac | 4.23e-19 | 25 |
epithelium of foregut-midgut junction | 4.23e-19 | 25 |
anatomical boundary | 4.23e-19 | 25 |
hepatobiliary system | 4.23e-19 | 25 |
foregut-midgut junction | 4.23e-19 | 25 |
septum transversum | 4.23e-19 | 25 |
sac | 2.34e-18 | 26 |
exocrine gland | 2.34e-15 | 31 |
exocrine system | 2.34e-15 | 31 |
cranial nerve II | 1.61e-14 | 1 |
cranial nerve | 1.61e-14 | 1 |
nerve trunk | 1.61e-14 | 1 |
nerve connecting eye with brain | 1.61e-14 | 1 |
nerve | 1.61e-14 | 1 |
retinal neural layer | 1.61e-14 | 1 |
presumptive neural retina | 1.61e-14 | 1 |
endocrine gland | 1.43e-13 | 35 |
endocrine system | 1.73e-10 | 45 |
gut epithelium | 1.10e-08 | 54 |
abdomen element | 1.10e-08 | 54 |
abdominal segment element | 1.10e-08 | 54 |
gland | 6.45e-08 | 59 |
neural tissue | 6.58e-08 | 2 |
multi cell component structure | 6.58e-08 | 2 |
neuron projection bundle | 6.58e-08 | 2 |
abdominal segment of trunk | 8.86e-08 | 60 |
abdomen | 8.86e-08 | 60 |
Ontology term | p-value | n |
---|---|---|
melanoma | 9.19e-08 | 2 |