FFCP PHASE1:Hg19::chr1:43824577..43824636,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:43824577..43824636,+ to FFCP PHASE1:Hg19::chr1:43824577..43824636,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=991 | |EntrezGene=991 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1723 | |HGNC=1723 | ||
|TSSclassifier=strong | |||
|UniProt=Q12834,B4E1H5 | |UniProt=Q12834,B4E1H5 | ||
|association_with_transcript=0bp_to_ENST00000310955,ENST00000437896,NM_001255,uc001cix.2_5end | |||
|cluster_id=chr1:43824577..43824636,+ | |||
|coexpression_cluster_id=C2586 | |||
|description=CAGE_peak_2_at_CDC20_5end | |||
|id=chr1:43824577..43824636,+ | |||
|ontology_enrichment_celltype=CL:0000548!9.70e-21!679;CL:0000004!9.70e-21!679;CL:0000255!9.70e-21!679;CL:0000012!2.56e-20!682;CL:0000066!2.87e-19!254;CL:0002321!6.73e-14!248;CL:0000220!3.76e-13!246;CL:0000003!2.31e-11!722;CL:0000144!2.10e-10!625;CL:0000055!3.11e-08!180;CL:0000063!5.32e-08!578;CL:0000333!3.09e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.88e-07;15!CL:1000497;3.93e-07;17!CL:0002518;3.93e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.04e-19,253;CL:0002321,2.61e-13,250;CL:0000333,2.51e-07,41;CL:1000449,2.67e-07,15;CL:1000497,3.34e-07,17;CL:0002518,3.34e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.13e-35!235;DOID:14566!4.77e-34!239;DOID:2531!5.33e-21!51;DOID:0060083!5.33e-21!51;DOID:0050686!2.05e-20!137;DOID:1240!3.82e-18!39;DOID:8692!4.95e-15!31;DOID:0050687!3.53e-14!143;DOID:305!1.88e-11!106 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.25e-15;31!DOID:1240;8.43e-15;39!DOID:2531;1.66e-13;51!DOID:0060083;1.66e-13;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.16e-35,235;DOID:14566,2.90e-34,239;DOID:2531,1.25e-21,51;DOID:0060083,1.25e-21,51;DOID:0050686,1.27e-20,137;DOID:1240,1.11e-18,39;DOID:8692,1.82e-15,31;DOID:0050687,8.69e-14,143;DOID:305,2.35e-11,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.88e-07;15!UBERON:0004819;2.88e-07;15!UBERON:0001285;2.88e-07;15!UBERON:0007684;2.88e-07;15!UBERON:0002113;3.02e-07;24!UBERON:0011143;3.02e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,2.67e-07,15;UBERON:0009773,2.67e-07,15;UBERON:0001231,2.67e-07,15;UBERON:0001285,2.67e-07,15;UBERON:0007684,2.67e-07,15;UBERON:0004208,2.67e-07,15 | |||
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| ||
|short_description=p2@CDC20 | |||
}} | }} |
Latest revision as of 04:20, 18 September 2015
Short description: | p2@CDC20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDC20_5end |
Coexpression cluster: | C2586_Alveolar_acute_Renal_Mesenchymal_Bronchial_Trabecular_Corneal |
Association with transcript: | 0bp_to_ENST00000310955, ENST00000437896, NM_001255, uc001cix.2_5end |
EntrezGene: | CDC20 |
HGNC: | 1723 |
UniProt: | Q12834B4E1H5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.04e-19 | 253 |
embryonic cell | 2.61e-13 | 250 |
migratory neural crest cell | 2.51e-07 | 41 |
epithelial cell of nephron | 2.67e-07 | 15 |
kidney cell | 3.34e-07 | 17 |
kidney epithelial cell | 3.34e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 2.67e-07 | 15 |
renal tubule | 2.67e-07 | 15 |
nephron tubule | 2.67e-07 | 15 |
nephron | 2.67e-07 | 15 |
uriniferous tubule | 2.67e-07 | 15 |
nephrogenic mesenchyme | 2.67e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.16e-35 | 235 |
disease of cellular proliferation | 2.90e-34 | 239 |
hematologic cancer | 1.25e-21 | 51 |
immune system cancer | 1.25e-21 | 51 |
organ system cancer | 1.27e-20 | 137 |
leukemia | 1.11e-18 | 39 |
myeloid leukemia | 1.82e-15 | 31 |
cell type cancer | 8.69e-14 | 143 |
carcinoma | 2.35e-11 | 106 |