FFCP PHASE1:Hg19::chr1:45476944..45477023,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:45476944..45477023,- to FFCP PHASE1:Hg19::chr1:45476944..45477023,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79654 | |EntrezGene=79654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26117 | |HGNC=26117 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T447 | |UniProt=Q5T447 | ||
|association_with_transcript=0bp_to_ENST00000372172_5end | |||
|cluster_id=chr1:45476944..45477023,- | |||
|description=CAGE_peak_1_at_HECTD3_5end | |||
|id=chr1:45476944..45477023,- | |||
|ontology_enrichment_celltype=CL:0000115!6.32e-17!35;CL:0002078!1.70e-15!44;CL:0000222!5.77e-14!119;CL:0002139!1.99e-11!24;CL:0000220!1.51e-10!246;CL:0002321!3.54e-10!248;CL:0000213!4.03e-10!57;CL:0000215!4.03e-10!57;CL:0000071!1.31e-09!18;CL:0002546!1.31e-09!18;CL:1000449!1.67e-08!16;CL:1000497!4.41e-08!18;CL:0002518!4.41e-08!18;CL:0000055!5.94e-08!180;CL:0002371!3.87e-07!591;CL:0002681!5.17e-07!13;CL:0002584!5.17e-07!13;CL:1000507!5.30e-07!12;CL:1000494!5.30e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.00e-14;36!CL:0002139;2.20e-11;24!CL:0002078;6.88e-11;45!CL:0000071;1.43e-09;18!CL:1000449;2.25e-08;15!CL:1000497;5.73e-08;17!CL:0002518;5.73e-08;17!CL:0002681;6.90e-07;12!CL:0002584;6.90e-07;12!CL:0000213;9.66e-07;58!CL:0000215;9.66e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.00e-17,36;CL:0002078,5.55e-16,45;CL:0000222,1.50e-14,121;CL:0002139,1.99e-11,24;CL:0002321,1.28e-10,250;CL:0000213,1.57e-10,58;CL:0000215,1.57e-10,58;CL:0000071,1.31e-09,18;CL:0002546,1.31e-09,18;CL:1000449,2.23e-08,15;CL:1000497,6.25e-08,17;CL:0002518,6.25e-08,17;CL:0002681,6.97e-07,12;CL:0002584,6.97e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;1.43e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.26e-13!79;UBERON:0007798!2.26e-13!79;UBERON:0000055!3.86e-13!69;UBERON:0003914!2.11e-11!118;UBERON:0001981!1.64e-10!60;UBERON:0007500!1.64e-10!60;UBERON:0004537!1.64e-10!60;UBERON:0006965!1.64e-10!60;UBERON:0004872!9.39e-10!84;UBERON:0001986!1.31e-09!18;UBERON:0004638!1.31e-09!18;UBERON:0004852!1.31e-09!18;UBERON:0004535!2.62e-09!110;UBERON:0001637!8.25e-09!42;UBERON:0003509!8.25e-09!42;UBERON:0004572!8.25e-09!42;UBERON:0001009!1.15e-08!113;UBERON:0000080!1.17e-08!18;UBERON:0002120!1.17e-08!18;UBERON:0004875!1.17e-08!18;UBERON:0005721!1.17e-08!18;UBERON:0005754!1.17e-08!18;UBERON:0007297!1.17e-08!18;UBERON:0004211!1.67e-08!16;UBERON:0001285!1.67e-08!16;UBERON:0007684!1.67e-08!16;UBERON:0003220!1.67e-08!16;UBERON:0004208!1.67e-08!16;UBERON:0006555!2.09e-08!17;UBERON:0005103!2.09e-08!17;UBERON:0000083!2.09e-08!17;UBERON:0009201!2.09e-08!17;UBERON:0004819!2.09e-08!17;UBERON:0006553!2.09e-08!17;UBERON:0003074!2.09e-08!17;UBERON:0003060!2.09e-08!17;UBERON:0003887!7.15e-08!21;UBERON:0004876!7.90e-08!20;UBERON:0000353!2.05e-07!17;UBERON:0004111!2.26e-07!241;UBERON:0000487!2.90e-07!22;UBERON:0001225!5.17e-07!13;UBERON:0008987!5.17e-07!13;UBERON:0009773!5.30e-07!12;UBERON:0001231!5.30e-07!12;UBERON:0004810!5.30e-07!12;UBERON:0000119!5.78e-07!312;UBERON:0002113!6.38e-07!27;UBERON:0003918!6.38e-07!27;UBERON:0005095!6.38e-07!27;UBERON:0007687!6.38e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.43e-09;18!UBERON:0001986;1.43e-09;18!UBERON:0004852;1.43e-09;18!UBERON:0000055;1.46e-08;65!UBERON:0003914;1.98e-08;74!UBERON:0006555;2.25e-08;15!UBERON:0004819;2.25e-08;15!UBERON:0001285;2.25e-08;15!UBERON:0007684;2.25e-08;15!UBERON:0000353;9.90e-08;15!UBERON:0007500;1.58e-07;56!UBERON:0001981;1.58e-07;56!UBERON:0004537;1.58e-07;56!UBERON:0001637;1.99e-07;42!UBERON:0003509;1.99e-07;42!UBERON:0004572;1.99e-07;42!UBERON:0000487;3.49e-07;22!UBERON:0001225;6.90e-07;12!UBERON:0008987;6.90e-07;12!UBERON:0006554;9.69e-07;30!UBERON:0001008;9.69e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.45e-13,78;UBERON:0007798,1.45e-13,78;UBERON:0000055,2.36e-13,68;UBERON:0003914,3.23e-11,117;UBERON:0007500,1.04e-10,59;UBERON:0001981,1.04e-10,59;UBERON:0004537,1.04e-10,59;UBERON:0006965,1.04e-10,59;UBERON:0004872,6.90e-10,83;UBERON:0004638,1.31e-09,18;UBERON:0001986,1.31e-09,18;UBERON:0004852,1.31e-09,18;UBERON:0004535,2.08e-09,109;UBERON:0001637,8.25e-09,42;UBERON:0003509,8.25e-09,42;UBERON:0004572,8.25e-09,42;UBERON:0001009,9.27e-09,112;UBERON:0004211,2.23e-08,15;UBERON:0009773,2.23e-08,15;UBERON:0001231,2.23e-08,15;UBERON:0001285,2.23e-08,15;UBERON:0007684,2.23e-08,15;UBERON:0004208,2.23e-08,15;UBERON:0006555,2.87e-08,16;UBERON:0004819,2.87e-08,16;UBERON:0000353,1.02e-07,15;UBERON:0007503,1.78e-07,78;UBERON:0000487,2.90e-07,22;UBERON:0001225,6.97e-07,12;UBERON:0008987,6.97e-07,12;UBERON:0004111,9.53e-07,240;UBERON:0002113,9.79e-07,26;UBERON:0003918,9.79e-07,26;UBERON:0011143,9.79e-07,26;UBERON:0005095,9.79e-07,26;UBERON:0007687,9.79e-07,26 | |||
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| ||
|short_description=p1@HECTD3 | |||
}} | }} |
Latest revision as of 07:11, 18 September 2015
Short description: | p1@HECTD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HECTD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000372172_5end |
EntrezGene: | HECTD3 |
HGNC: | 26117 |
UniProt: | Q5T447 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.00e-17 | 36 |
meso-epithelial cell | 5.55e-16 | 45 |
mesodermal cell | 1.50e-14 | 121 |
endothelial cell of vascular tree | 1.99e-11 | 24 |
embryonic cell | 1.28e-10 | 250 |
lining cell | 1.57e-10 | 58 |
barrier cell | 1.57e-10 | 58 |
blood vessel endothelial cell | 1.31e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.31e-09 | 18 |
epithelial cell of nephron | 2.23e-08 | 15 |
kidney cell | 6.25e-08 | 17 |
kidney epithelial cell | 6.25e-08 | 17 |
kidney cortical cell | 6.97e-07 | 12 |
renal cortical epithelial cell | 6.97e-07 | 12 |