FFCP PHASE1:Hg19::chr20:23066988..23066999,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:23066988..23066999,- to FFCP PHASE1:Hg19::chr20:23066988..23066999,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22918 | |EntrezGene=22918 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15855 | |HGNC=15855 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPY3 | |UniProt=Q9NPY3 | ||
|association_with_transcript=-11bp_to_ENST00000246006,NM_012072,uc002wsv.2_5end | |||
|cluster_id=chr20:23066988..23066999,- | |||
|coexpression_cluster_id=C1611 | |||
|description=CAGE_peak_3_at_CD93_5end | |||
|id=chr20:23066988..23066999,- | |||
|ontology_enrichment_celltype=CL:0002057!6.21e-31!42;CL:0000860!1.11e-27!45;CL:0000766!2.09e-25!76;CL:0002194!4.20e-24!63;CL:0000576!4.20e-24!63;CL:0000040!4.20e-24!63;CL:0000559!4.20e-24!63;CL:0002009!8.98e-23!65;CL:0000557!5.27e-21!71;CL:0000839!1.46e-20!70;CL:0002139!2.61e-20!24;CL:0000115!1.55e-19!35;CL:0000763!7.36e-18!112;CL:0000049!7.36e-18!112;CL:0000071!1.16e-15!18;CL:0002546!1.16e-15!18;CL:0002078!5.21e-14!44;CL:0000738!4.23e-13!140;CL:0002087!2.85e-12!119;CL:0000037!1.55e-11!172;CL:0000566!1.55e-11!172;CL:0002032!1.78e-10!165;CL:0000837!1.78e-10!165;CL:0000988!2.96e-10!182;CL:0002031!1.06e-09!124;CL:1000413!5.73e-09!9;CL:0000213!1.10e-07!57;CL:0000215!1.10e-07!57;CL:0002543!8.69e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.35e-30;33!CL:0002057;1.35e-30;33!CL:0002139;2.18e-25;24!CL:0000115;2.81e-22;36!CL:0000473;2.67e-20;39!CL:0000234;2.67e-20;39!CL:0000071;4.28e-19;18!CL:0000576;4.21e-18;48!CL:0002078;6.09e-12;45!CL:1000413;1.11e-11;9!CL:0000766;1.51e-11;69!CL:0002543;8.81e-09;6!CL:0000213;1.88e-08;58!CL:0000215;1.88e-08;58!CL:0002544;4.80e-08;6!CL:0002138;7.57e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.73e-34,42;CL:0002057,5.73e-34,42;CL:0000473,4.63e-28,48;CL:0000234,4.63e-28,48;CL:0000115,8.09e-26,36;CL:0002139,1.70e-25,24;CL:0000766,3.68e-22,72;CL:0002194,5.29e-21,59;CL:0000576,5.29e-21,59;CL:0000040,5.29e-21,59;CL:0000559,5.29e-21,59;CL:0002009,6.43e-20,61;CL:0000071,4.34e-19,18;CL:0002546,4.34e-19,18;CL:0002078,1.40e-18,45;CL:0000557,4.74e-18,67;CL:0000839,1.66e-17,66;CL:0000763,3.77e-13,108;CL:0000049,3.77e-13,108;CL:0000213,2.95e-12,58;CL:0000215,2.95e-12,58;CL:1000413,9.03e-12,9;CL:0002543,8.98e-09,6;CL:0000738,2.57e-08,136;CL:0002544,4.16e-08,6;CL:0002087,4.59e-08,115;CL:0005020,5.80e-08,6;CL:0002138,5.80e-08,6;CL:0005022,5.80e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.80e-25;42!CL:0002546;4.28e-19;18!CL:0005022;7.57e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.10e-32!115;UBERON:0002193!1.48e-26!112;UBERON:0003081!3.83e-23!216;UBERON:0002390!1.23e-22!102;UBERON:0003061!1.23e-22!102;UBERON:0002405!4.73e-18!115;UBERON:0002371!1.52e-16!80;UBERON:0001986!1.16e-15!18;UBERON:0004638!1.16e-15!18;UBERON:0004852!1.16e-15!18;UBERON:0001474!3.75e-14!86;UBERON:0000487!1.70e-11!22;UBERON:0004765!4.15e-10!101;UBERON:0001434!4.15e-10!101;UBERON:0001009!1.99e-09!113;UBERON:0006914!2.65e-09!25;UBERON:0003915!5.73e-09!9;UBERON:0004700!5.73e-09!9;UBERON:0001917!5.73e-09!9;UBERON:0004535!2.88e-08!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.28e-19;18!UBERON:0001986;4.28e-19;18!UBERON:0004852;4.28e-19;18!UBERON:0000487;1.41e-14;22!UBERON:0006914;3.64e-12;25!UBERON:0003915;1.11e-11;9!UBERON:0004700;1.11e-11;9!UBERON:0001917;1.11e-11;9!UBERON:0000490;1.72e-07;33!UBERON:0000178;5.39e-07;15!UBERON:0000179;5.39e-07;15!UBERON:0000463;5.39e-07;15!UBERON:0001638;6.75e-07;9!UBERON:0003920;6.75e-07;9!UBERON:0004582;6.75e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,8.21e-29,203;UBERON:0002193,2.27e-25,108;UBERON:0002390,4.25e-21,98;UBERON:0003061,4.25e-21,98;UBERON:0002405,1.17e-19,93;UBERON:0004638,4.34e-19,18;UBERON:0001986,4.34e-19,18;UBERON:0004852,4.34e-19,18;UBERON:0000926,6.02e-16,315;UBERON:0004120,6.02e-16,315;UBERON:0006603,6.02e-16,315;UBERON:0001009,1.04e-14,112;UBERON:0000487,1.42e-14,22;UBERON:0002371,1.65e-14,76;UBERON:0007023,2.38e-13,114;UBERON:0004535,5.74e-13,109;UBERON:0001474,1.30e-12,82;UBERON:0006914,3.67e-12,25;UBERON:0003915,9.03e-12,9;UBERON:0004700,9.03e-12,9;UBERON:0001917,9.03e-12,9;UBERON:0004765,1.62e-10,90;UBERON:0000055,1.96e-09,68;UBERON:0004872,1.55e-08,83;UBERON:0001434,1.99e-08,100;UBERON:0002049,3.62e-07,78;UBERON:0007798,3.62e-07,78;UBERON:0000178,5.94e-07,15;UBERON:0000179,5.94e-07,15;UBERON:0000463,5.94e-07,15;UBERON:0001638,6.37e-07,9;UBERON:0003920,6.37e-07,9;UBERON:0004582,6.37e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,1.18009283054671,0.767658796194425,3.2511385896376,0,0,0,0,0,0,8.86392653651004,6.61796676651468,7.81239134577067,0.223915474239924,0,0,8.14230137165562,5.66813915533214,4.12392904019288,5.34586784883075,4.93401465626191,4.33588919253145,14.0969272237854,9.22178543504762,4.49316236788312,4.82643953031266,1.93645405075148,1.35426486594342,7.9061782607894,6.27684145133045,2.9214052977861,14.9981107261742,6.41858054152187,5.75403413219137,6.59702600373432,5.78444607102732,2.98357325372886,9.57690487474327,9.64554881974938,0.622822248995575,10.5524439407832,7.30076085788282,2.38907729175628,4.84319602106695,6.2607198117886,2.53169909952708,0.845021145247767,2.12604299965044,1.46761051855863,3.93150209012733,4.6554836780867,2.73233497385036,0.570025487482497,0.79566670879636,0.365328307529268,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,1.32171328579026,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0.473554504088034,0,0,0,0,0,0.670700859703636,2.04580098949649,0,0,0,0,0,0,0,0,2.42311289670768,0,0,0.324547393654683,0.348259474598534,1.06366368415092,0.476981248610684,0.571994910780128,0.74291500265913,7.15544666520138,18.0649264972286,6.94281003215189,7.91431118693613,6.71199097935849,7.97842321626196,10.0317583937669,9.8198368484345,11.7402866686614,10.3763389957048,4.43112248820062,2.28081631715554,0.976248230192678,2.57364156242108,2.43042584364528,4.46498641420399,4.71511682514957,5.74318550464943,15.3316637465883,11.3911879148175,14.6561395144326,0,11.6334079244498,0,0,0,0,0,0,0,2.1349799145941,0,0.311211035399766,1.48181739276657,1.14423332179421,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.5012645471176,4.20725321410337,0,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,3.46479474626577,1.85194205030644,3.61482889245737,0,0,0.984868024349589,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.672786506072164,0.43596006883328,0.1466765716419,0,0,1.690605505112,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,1.12085143993527,0.591092280605782,0.215627574859517,0.256686072559497,0,0,0,0,0,1.49801404789436,11.966458368161,5.38740167466846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,2.15714200818617,2.34800627167578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2360045663807,10.3757160218675,8.42072072798343,20.0495428497376,0,0,0,0.831076008928724,0,0,0,0,0,0,4.53380451249978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.5189024372854,0,0,0,0,3.04468565539302,3.82318603571188,3.41788312304498,1.66762242820452,0.822724546172388,4.53931317834902,3.24018862342869,2.37937552888281,0,0,0,0,0,0,0,0.399158742865633,0.957526850661834,2.54008299268659,0,0.561594356226918,0,0,0,0.846458889008016,0,0,0,1.03051603426729,0.614481528616916,0.223676107892416,0,3.51698571723673,0,0,0,0,0,0,8.79049075631364,0,0.780103689942349,0,0,0,0,0.994147647766298,0.422008249231538,0,2.30725423917463,0,4.38345574152353,2.48655523978033,0,0,0,0,0,0,0,4.83352687620975,2.3948309234694,0,0,0.371072392647405,0,0,0,8.69999490521752,0,0,0,0,0,0,0,0.723578631752448,0,0.221158519862449,0,0.438770794307945,0,0,2.30850775511391,0,0,0,0,0.31900115973192,0,0,0,0.941881538370149,0.166211681900156,0,0,0,0,0.635746315921515,0,0,0,0,2.98578579323551,1.76915129006678,1.22206028986725,0,0,0,0.539209063845416,14.4463976513782,0,0,0,0,0.789168805698781,6.04953580243319,0.30607276163049,6.00272506470636,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,3.78257164304836,0,4.74559555639118,0,0.397429223405979,0.0633107959558787,0,0,2.13452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.684526894459965,1.27746588066972,0,0,4.74780082162832,1.3749625440701,17.9468256144203,2.39614800598789,2.57535628881943,9.59637267000052,5.64341168888501,0,0,0,0,0,0,0.169346664131569,0.795229689809303,0.272406812223151,0,0,0,0,0,0,0,1.49730843868477,2.93745693555989,0,0,0,4.2881719582402,15.8902072887704,0,0,0,0,0,0,0,0.113312091520126,1.46552233678082,0,0.387848869084652,0.92562821219883,0,0,8.64978041798327,6.28817220398664,14.912605992499,2.97699613087171,0,0,0,5.98419583706421,9.52621597286261,4.59518365145192,2.95085367638824,0,0.886068179966986,0,0.3755727921195,2.86704597845036,1.44207766997908,1.1177352529449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.638535436228605,0,0.504143392443436,0,0.484426936895553,0,0,0,0,0,0,0,0,2.55715116387475,0,0.781514011233092,0,0,0,0.202612753855184,0,0.620060389503552,0.19024743058172,0.546974809018219,0,1.98484471355718,0,0,0.535701835878287,0.336283722218824,0,0.68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| ||
|short_description=p3@CD93 | |||
}} | }} |
Latest revision as of 19:27, 24 September 2015
Short description: | p3@CD93 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CD93_5end |
Coexpression cluster: | C1611_Renal_Hepatic_Eosinophils_Endothelial_CD14_heart_Neutrophils |
Association with transcript: | -11bp_to_ENST00000246006, NM_012072, uc002wsv.2_5end |
EntrezGene: | CD93 |
HGNC: | 15855 |
UniProt: | Q9NPY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.73e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.73e-34 | 42 |
defensive cell | 4.63e-28 | 48 |
phagocyte | 4.63e-28 | 48 |
endothelial cell | 8.09e-26 | 36 |
endothelial cell of vascular tree | 1.70e-25 | 24 |
myeloid leukocyte | 3.68e-22 | 72 |
monopoietic cell | 5.29e-21 | 59 |
monocyte | 5.29e-21 | 59 |
monoblast | 5.29e-21 | 59 |
promonocyte | 5.29e-21 | 59 |
macrophage dendritic cell progenitor | 6.43e-20 | 61 |
blood vessel endothelial cell | 4.34e-19 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.34e-19 | 18 |
meso-epithelial cell | 1.40e-18 | 45 |
granulocyte monocyte progenitor cell | 4.74e-18 | 67 |
myeloid lineage restricted progenitor cell | 1.66e-17 | 66 |
myeloid cell | 3.77e-13 | 108 |
common myeloid progenitor | 3.77e-13 | 108 |
lining cell | 2.95e-12 | 58 |
barrier cell | 2.95e-12 | 58 |
endothelial cell of artery | 9.03e-12 | 9 |
vein endothelial cell | 8.98e-09 | 6 |
leukocyte | 2.57e-08 | 136 |
aortic endothelial cell | 4.16e-08 | 6 |
nongranular leukocyte | 4.59e-08 | 115 |
lymphangioblast | 5.80e-08 | 6 |
endothelial cell of lymphatic vessel | 5.80e-08 | 6 |
vascular lymphangioblast | 5.80e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 8.21e-29 | 203 |
hemolymphoid system | 2.27e-25 | 108 |
hematopoietic system | 4.25e-21 | 98 |
blood island | 4.25e-21 | 98 |
immune system | 1.17e-19 | 93 |
blood vessel endothelium | 4.34e-19 | 18 |
endothelium | 4.34e-19 | 18 |
cardiovascular system endothelium | 4.34e-19 | 18 |
mesoderm | 6.02e-16 | 315 |
mesoderm-derived structure | 6.02e-16 | 315 |
presumptive mesoderm | 6.02e-16 | 315 |
circulatory system | 1.04e-14 | 112 |
simple squamous epithelium | 1.42e-14 | 22 |
bone marrow | 1.65e-14 | 76 |
adult organism | 2.38e-13 | 114 |
cardiovascular system | 5.74e-13 | 109 |
bone element | 1.30e-12 | 82 |
squamous epithelium | 3.67e-12 | 25 |
endothelial tube | 9.03e-12 | 9 |
arterial system endothelium | 9.03e-12 | 9 |
endothelium of artery | 9.03e-12 | 9 |
skeletal element | 1.62e-10 | 90 |
vessel | 1.96e-09 | 68 |
splanchnic layer of lateral plate mesoderm | 1.55e-08 | 83 |
skeletal system | 1.99e-08 | 100 |
vasculature | 3.62e-07 | 78 |
vascular system | 3.62e-07 | 78 |
blood | 5.94e-07 | 15 |
haemolymphatic fluid | 5.94e-07 | 15 |
organism substance | 5.94e-07 | 15 |
vein | 6.37e-07 | 9 |
venous blood vessel | 6.37e-07 | 9 |
venous system | 6.37e-07 | 9 |