FFCP PHASE1:Hg19::chr2:143886927..143886938,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:143886927..143886938,+ to FFCP PHASE1:Hg19::chr2:143886927..143886938,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55843 | |EntrezGene=55843 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21030 | |HGNC=21030 | ||
|TSSclassifier=strong | |||
|UniProt=Q53QZ3 | |UniProt=Q53QZ3 | ||
|association_with_transcript=28bp_to_NM_018460,uc002tvm.3,uc010zbl.1_5end | |||
|cluster_id=chr2:143886927..143886938,+ | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_3_at_ARHGAP15_5end | |||
|id=chr2:143886927..143886938,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.84e-92!172;CL:0000566!4.84e-92!172;CL:0000988!2.42e-87!182;CL:0002032!3.78e-86!165;CL:0000837!3.78e-86!165;CL:0000738!9.15e-72!140;CL:0002031!5.65e-60!124;CL:0002087!2.63e-59!119;CL:0000763!2.71e-43!112;CL:0000049!2.71e-43!112;CL:0000542!7.90e-39!53;CL:0000051!7.90e-39!53;CL:0000838!5.68e-38!52;CL:0000766!1.05e-26!76;CL:0000839!1.13e-22!70;CL:0000557!6.18e-22!71;CL:0000084!5.86e-20!25;CL:0000827!5.86e-20!25;CL:0002194!5.13e-19!63;CL:0000576!5.13e-19!63;CL:0000040!5.13e-19!63;CL:0000559!5.13e-19!63;CL:0002009!9.24e-19!65;CL:0002057!6.77e-18!42;CL:0000945!3.92e-17!24;CL:0000826!3.92e-17!24;CL:0000134!4.26e-16!358;CL:0000791!7.26e-16!18;CL:0000789!7.26e-16!18;CL:0002420!7.26e-16!18;CL:0002419!7.26e-16!18;CL:0000790!7.26e-16!18;CL:0000860!9.27e-16!45;CL:0002320!6.98e-15!365;CL:0000219!4.15e-11!390;CL:0000236!4.48e-11!14;CL:0000625!6.43e-10!11 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.75e-27;53!CL:0000084;1.76e-24;25!CL:0000945;6.05e-21;24!CL:0002087;1.66e-20;104!CL:0000791;2.49e-19;18!CL:0000789;2.49e-19;18!CL:0002419;2.49e-19;18!CL:0000738;6.94e-17;136!CL:0000988;4.40e-16;177!CL:0000763;1.11e-14;100!CL:0000576;1.26e-13;48!CL:0000766;1.38e-13;69!CL:0000236;7.03e-13;13!CL:0000625;6.14e-12;11!CL:0000860;2.10e-11;33!CL:0002057;2.10e-11;33!CL:0000473;2.92e-10;39!CL:0000234;2.92e-10;39!CL:0000624;7.98e-08;6!CL:0000219;5.02e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.11e-109,168;CL:0000988,1.37e-104,177;CL:0002032,1.97e-102,161;CL:0000837,1.97e-102,161;CL:0000738,2.05e-85,136;CL:0002031,2.87e-73,120;CL:0002087,2.57e-72,115;CL:0000763,8.50e-50,108;CL:0000049,8.50e-50,108;CL:0000542,6.55e-48,53;CL:0000051,6.55e-48,53;CL:0000838,7.64e-47,52;CL:0000766,8.36e-31,72;CL:0000134,3.16e-27,354;CL:0000839,9.35e-27,66;CL:0000557,6.02e-26,67;CL:0002320,7.69e-26,361;CL:0000084,2.03e-24,25;CL:0000827,2.03e-24,25;CL:0002194,3.25e-22,59;CL:0000576,3.25e-22,59;CL:0000040,3.25e-22,59;CL:0000559,3.25e-22,59;CL:0002009,5.31e-22,61;CL:0000219,5.12e-21,386;CL:0000945,6.65e-21,24;CL:0000826,6.65e-21,24;CL:0000791,2.51e-19,18;CL:0000789,2.51e-19,18;CL:0002420,2.51e-19,18;CL:0002419,2.51e-19,18;CL:0000790,2.51e-19,18;CL:0000473,1.80e-18,48;CL:0000234,1.80e-18,48;CL:0000860,7.47e-18,42;CL:0002057,7.47e-18,42;CL:0000048,2.72e-15,427;CL:0000034,4.46e-15,441;CL:0000723,1.60e-14,433;CL:0000236,2.25e-13,14;CL:0000625,6.13e-12,11;CL:0000624,8.05e-08,6;CL:0002393,2.28e-07,9;CL:0002397,2.28e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000051;1.75e-27;53!CL:0000790;2.49e-19;18!CL:0000049;1.36e-13;108!CL:0002057;1.18e-12;42 | |||
|ontology_enrichment_disease=DOID:2531!2.52e-26!51;DOID:0060083!2.52e-26!51;DOID:1240!6.71e-22!39;DOID:8692!1.13e-16!31;DOID:0060058!2.04e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:1240;4.22e-20;39!DOID:8692;6.96e-19;31!DOID:2531;7.13e-19;51!DOID:0060083;7.13e-19;51!DOID:0060058;7.72e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.11e-32,51;DOID:0060083,5.11e-32,51;DOID:1240,3.46e-26,39;DOID:8692,1.04e-19,31;DOID:0060058,7.74e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.45e-32!102;UBERON:0003061!3.45e-32!102;UBERON:0002193!1.26e-28!112;UBERON:0002371!3.44e-19!80;UBERON:0001474!2.06e-16!86;UBERON:0002405!2.79e-14!115;UBERON:0002384!5.80e-14!375;UBERON:0007023!9.36e-13!115;UBERON:0004765!1.37e-11!101;UBERON:0001434!1.37e-11!101;UBERON:0000178!4.10e-10!15;UBERON:0000179!4.10e-10!15;UBERON:0000463!4.10e-10!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.00e-11;15!UBERON:0000179;6.00e-11;15!UBERON:0000463;6.00e-11;15!UBERON:0002390;2.87e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.71e-38,98;UBERON:0003061,1.71e-38,98;UBERON:0002193,6.19e-35,108;UBERON:0002405,1.22e-25,93;UBERON:0002384,5.83e-24,371;UBERON:0002371,3.15e-23,76;UBERON:0001474,2.92e-20,82;UBERON:0004765,5.70e-17,90;UBERON:0001434,1.13e-13,100;UBERON:0000178,6.62e-11,15;UBERON:0000179,6.62e-11,15;UBERON:0000463,6.62e-11,15;UBERON:0004177,7.51e-08,7;UBERON:0005057,7.51e-08,7;UBERON:0003081,9.60e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,9.16960868975415,7.88165658719479,9.99626922683726,0.393364276848904,6.1412703695554,2.63187409637329,0,0,0,16.5779809241845,6.39761546193397,4.11040615068786,5.53995408531877,3.20871115952227,5.20826089718044,2.68698569087909,5.83008598834163,3.60605794687861,0.436194716338694,1.51150377475524,0.727752183563449,0.464858073811369,1.6446715520873,1.54853185447552,4.31538588483226,2.30544635876191,4.49316236788312,3.7922024881028,2.5819387343353,1.35426486594342,1.12945403725563,1.91034305040492,2.24723484445085,1.83650335422542,1.28371610830437,1.91801137739712,1.64925650093358,1.39624560335142,2.13112375266347,0.290209238628584,2.26954089876456,3.11411124497787,2.76373531782418,3.12889751052121,3.69221035998698,3.02699751316684,1.47311054395026,1.58231193720442,7.6051903072299,4.889898899196,3.77385561915077,2.13424399178341,3.00353785683013,4.018139667427,8.83539505597871,4.17725022118089,5.29726045917438,7.03984977845291,16.3841583378639,12.4531295540898,12.3751764544287,12.0118796110804,14.3688109988621,9.25462821898807,18.1270213361719,14.7995371968457,13.5064553555316,13.379562984383,7.93027971474155,7.8471198817415,5.00429761072646,22.8183333332046,12.1833336452241,10.6912779479745,31.5982476288382,23.7923254642521,14.6768819777767,23.3792074089494,38.8822494529256,22.6846548755625,16.6150420937716,22.7475245562613,14.3462278092756,16.3874777925447,26.9678163550029,32.885652116516,66.364906633327,27.1364410586571,25.148837840433,30.3153019034433,54.5017938375293,26.0589935649306,18.555882056062,34.6636978066719,17.2025323735012,12.370585623272,15.207232711174,19.2736152419549,22.3976569520232,21.2382235138988,18.2318484073893,20.5281999230262,9.87873041801189,2.94184215361858,10.1377082717959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,1.56716763569341,1.86141144726411,8.34717185068697,6.86393892936153,9.28643753323912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,23.2668158488995,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,8.38779888887836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70838706696137,2.10603838625314,1.93220510975347,0,0,0,0,0,0,18.7212030400459,8.01240749520357,4.56121854189699,6.3412779503463,2.90357596880674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51128545716063,0,0,0,0,0,0,0,35.8672460779287,7.09310736726938,5.82194452120697,9.11235557586213,0,0,0,0,0,24.717231790257,29.9161459204025,26.9370083733423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.0940659069708,12.7271378482984,8.75165973988244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.28889814968902,2.3529190592241,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,10.1489521846434,8.41100927856613,5.12682468456746,9.76750279376935,12.752230465672,9.07862635669804,10.8006287447623,6.34500141035416,0,0,0,15.4216635354347,3.17392268548179,10.3867091288685,7.01475600006818,30.5356438292209,9.57526850661834,15.6638451215673,20.7758041775716,14.8822504400133,19.3999477178213,5.17043656050977,17.5444133963047,5.0787533340481,4.33587802779989,5.44859209415828,11.0720021799485,7.90062292938259,10.4461859864876,10.5127770709435,11.6794399198336,10.9417333425143,5.01131113011436,0,10.2773157820874,12.6567347839172,14.098700508785,0,0.293016358543788,0,5.126395676764,0,0,0,0,0,1.40669416410513,0,3.13127361030843,0,0.996239941255349,11.3276405367771,0,0,3.32328974744888,0,0,0,6.13886844272246,0.493217028184668,7.18449277040819,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,2.65722415744152,0.482385754501632,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0.31900115973192,0,0,20.4386596391473,15.2270848703174,14.6266280072138,0.225595660617181,0,0,1.3282761290693,21.2975015833707,0,0,0,0,0,0.530745387020035,1.22206028986725,2.07564790076435,0.617819694732514,1.35748534357092,0.134802265961354,0,0.234264445725339,6.75082720097964,0,0,0.394584402849391,1.20990716048664,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.290967049465258,0,0,0,0,0.189932387867636,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0.821432273351958,2.55493176133945,0,3.15464825135177,0.558564802544508,0,0,0.199679000498991,0,0,0.268733889946905,0,0,0,0,0,0,4.14899327122344,0,0.544813624446302,0,0,0,1.349843349309,0,0.0607495566580247,0,0.0788057072991982,0.209818352539992,0,0,0,0,0.662091970365432,0,0,0,0,0,4.10462603746695,0,0,0,0,0.258565912723101,1.05786081394152,0,0,0.320362237703084,1.25763444079733,1.65695622138878,8.43482237080316,0,7.91651889475823,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,1.72022758707021,1.77486482458964,0.496771223531068,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|short_description=p3@ARHGAP15 | |||
}} | }} |
Latest revision as of 06:01, 17 September 2015
Short description: | p3@ARHGAP15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ARHGAP15_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 28bp_to_NM_018460, uc002tvm.3, uc010zbl.1_5end |
EntrezGene: | ARHGAP15 |
HGNC: | 21030 |
UniProt: | Q53QZ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.71e-38 | 98 |
blood island | 1.71e-38 | 98 |
hemolymphoid system | 6.19e-35 | 108 |
immune system | 1.22e-25 | 93 |
connective tissue | 5.83e-24 | 371 |
bone marrow | 3.15e-23 | 76 |
bone element | 2.92e-20 | 82 |
skeletal element | 5.70e-17 | 90 |
skeletal system | 1.13e-13 | 100 |
blood | 6.62e-11 | 15 |
haemolymphatic fluid | 6.62e-11 | 15 |
organism substance | 6.62e-11 | 15 |
hemopoietic organ | 7.51e-08 | 7 |
immune organ | 7.51e-08 | 7 |
lateral plate mesoderm | 9.60e-08 | 203 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.11e-32 | 51 |
immune system cancer | 5.11e-32 | 51 |
leukemia | 3.46e-26 | 39 |
myeloid leukemia | 1.04e-19 | 31 |
lymphoma | 7.74e-09 | 10 |