FFCP PHASE1:Hg19::chr2:145275228..145275241,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:145275228..145275241,- to FFCP PHASE1:Hg19::chr2:145275228..145275241,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9839 | |EntrezGene=9839 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14881 | |HGNC=14881 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000462355_5end | |||
|cluster_id=chr2:145275228..145275241,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_11_at_ZEB2_5end | |||
|id=chr2:145275228..145275241,- | |||
|ontology_enrichment_celltype=CL:0000766!1.43e-30!76;CL:0002057!9.42e-28!42;CL:0000839!8.40e-27!70;CL:0000860!9.25e-26!45;CL:0000557!2.85e-25!71;CL:0002194!2.43e-24!63;CL:0000576!2.43e-24!63;CL:0000040!2.43e-24!63;CL:0000559!2.43e-24!63;CL:0002009!3.46e-23!65;CL:0000763!5.36e-18!112;CL:0000049!5.36e-18!112;CL:0002320!3.25e-11!365;CL:0000134!6.92e-11!358;CL:0000048!1.64e-10!430;CL:0000738!4.09e-10!140;CL:0000723!2.10e-09!436;CL:0000219!6.42e-09!390;CL:0000034!2.12e-08!444;CL:0002031!3.37e-08!124;CL:0002087!3.02e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.43e-39;33!CL:0002057;2.43e-39;33!CL:0000473;9.22e-34;39!CL:0000234;9.22e-34;39!CL:0000576;2.59e-27;48!CL:0000766;2.75e-22;69!CL:0000763;1.53e-09;100!CL:0000094;2.21e-07;8!CL:0002393;2.77e-07;6!CL:0002397;2.77e-07;6!CL:0000097;7.57e-07;5!CL:0000738;9.05e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.12e-52,72;CL:0000473,9.90e-46,48;CL:0000234,9.90e-46,48;CL:0000860,2.19e-44,42;CL:0002057,2.19e-44,42;CL:0000839,4.77e-44,66;CL:0000557,4.20e-43,67;CL:0002194,1.66e-40,59;CL:0000576,1.66e-40,59;CL:0000040,1.66e-40,59;CL:0000559,1.66e-40,59;CL:0002009,1.31e-38,61;CL:0000763,4.83e-28,108;CL:0000049,4.83e-28,108;CL:0000738,5.98e-23,136;CL:0002031,8.76e-19,120;CL:0002087,2.96e-17,115;CL:0000037,1.00e-14,168;CL:0002032,1.22e-14,161;CL:0000837,1.22e-14,161;CL:0000988,5.15e-13,177;CL:0000134,7.79e-12,354;CL:0002320,1.82e-11,361;CL:0000048,9.19e-10,427;CL:0000723,3.15e-09,433;CL:0000034,6.58e-09,441;CL:0000219,7.57e-09,386;CL:0000094,1.32e-07,8;CL:0000097,5.27e-07,5;CL:0002028,5.27e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.93e-32;42!CL:0000049;5.39e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.09e-24!102;UBERON:0003061!1.09e-24!102;UBERON:0002371!1.15e-24!80;UBERON:0001474!1.19e-22!86;UBERON:0004765!1.31e-21!101;UBERON:0001434!1.31e-21!101;UBERON:0002193!9.59e-21!112;UBERON:0002204!3.26e-18!167;UBERON:0002405!4.37e-15!115;UBERON:0003081!7.15e-12!216;UBERON:0002384!8.78e-12!375;UBERON:0007023!2.56e-09!115;UBERON:0000479!2.32e-08!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.22e-07;22!UBERON:0001950;4.33e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.19e-42,76;UBERON:0002390,3.55e-41,98;UBERON:0003061,3.55e-41,98;UBERON:0001474,8.48e-38,82;UBERON:0002193,3.05e-35,108;UBERON:0004765,8.46e-34,90;UBERON:0001434,1.14e-33,100;UBERON:0002405,3.34e-32,93;UBERON:0002204,2.48e-23,167;UBERON:0003081,3.50e-18,203;UBERON:0000926,9.09e-13,315;UBERON:0004120,9.09e-13,315;UBERON:0006603,9.09e-13,315;UBERON:0002384,2.48e-11,371;UBERON:0002619,6.04e-07,22 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,1.0007329835313,0.446961094427288,0.872338524100369,0,0.631719873426831,0.783556884599516,0.245733936501509,0,0,0,0.495065411840187,0.662794751455832,0,0,0,0,0.123121058076788,0,0,0,0.410623275218653,0.376627918784408,0,0,0,0,1.91914699048606,1.23852898652861,0,0,0,0,0,0,4.9859586767869,6.61796676651468,6.2933152507597,1.34349284543955,0.647787332037959,2.31818010870768,6.54292074508041,4.91238726795452,6.79235371325885,12.3187389560013,8.63452564845834,12.6979612066992,23.3030837780942,12.5518746199259,14.6618982530923,13.4450815487281,7.10033151942209,12.1883837934908,10.5415710143859,8.18718450173537,12.1350681600346,14.3859429414324,14.7627352455003,17.9014395223732,10.8850929061616,12.3667467725412,9.37694451171927,28.1502961469727,14.7520158419696,22.4216009638407,15.3261685806613,13.037072960505,14.1172749058326,21.7943820948013,19.1504370713534,24.3676038329481,1.05627643155971,1.4882300997553,1.04829322754188,2.02191536063691,1.80212271409808,1.92870704036496,0.855038231223746,0.99458338599545,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.451725357233318,0.127986611154418,0,0.473554504088034,0,0.604820229674197,0.534880391567015,0.289648807765598,0,0,0.255725123687061,1.0843174571537,0.50133791063589,0.579386075843295,3.1811437882044,0.973269740605272,0.567208902984407,0.221729397462564,0.263504357079378,0.392937226493138,0,0,0.97364218096405,1.56716763569341,1.72845348674525,0,0,0,0.198762407366705,0.860234595106124,0,1.13061588384802,1.67799774483962,0,0.417989933073621,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.17859945656816,0,0.900891843866578,0,0,0.366403487860815,2.63560834872127,3.87780264148325,0,0.993943903390637,0.506522046658319,0.529636723252875,0.286836620748814,0,1.68203280042692,0,0.74000264525148,0.311211035399766,0.538842688278752,0.490385709340376,0.151357427644931,0,0.234321431833797,0.936480230490962,0,0.448346041655403,0.117434498643765,0.485618833104395,0.561803226808994,1.02077085627447,0.491337269247072,1.13658359293342,0,0.989067717114227,0,0,0.673344455816265,0.375355559615893,0,1.31693286264251,0.30648779579902,1.50238058906597,0.680593098960126,0.538168907066586,1.2813443329114,1.05965950579781,0,0.412210116953756,1.03056216018252,0.930584281657949,0.168776332241266,0.584622030967192,0.757301322732344,1.19664868234989,0.484938170456436,0.355009592516614,0.705264687593482,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,2.76269842704961,0.464367928031979,0,0,0,0,0.220587945464788,0,0,0.134831308160164,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,0.117408694235822,0,0,0.190254152234598,0,0,1.23108503043699,3.7440682422278,2.0808362720422,0,0,0,0,0,0,8.86793828212698,1.49682337822484,3.93923419527467,2.88239906833923,3.28230326908588,0.253991577168676,1.14596527667483,0,0,0.205654985406647,0.300343057843917,0,0,0,0.7333828582095,1.16344544182,0,0,0.26593811658487,0,0,0,0.266422179016099,0.428933980974443,0,0,2.28015329005615,1.06617584622764,0.791951872933429,1.50719688529793,0.871533458600294,0.299918973546171,0,0,2.10833939483032,0.479249710983165,0,0,0.868687840005475,1.02738161275192,1.43248770591916,0.112085143993527,0.591092280605782,2.15627574859517,1.41177339907723,0.508189248444927,0,1.54657762555539,0.670065061337395,0.637938751653163,6.74106321552464,8.97484377612075,2.07207756718018,0.36807447515742,1.00034104211935,0.271265023699736,1.66376689224646,1.24900292158013,0.473107245101804,0.234282829985426,1.20378439891088,4.5481500811197,0,0,0,1.12948698808508,0.195801157462741,0,0.206768026122887,2.15714200818617,2.02782359826544,0,0,0,0.744323423456331,0.61384789315225,0,0,0,0.64341568457443,0,1.07946785661859,0.532685175939381,0.492762936082855,0.519254429183621,0.232420756919918,0,0,0,0.229628896329213,0.182091168006717,0.262248829918848,0,0.462092022626489,0,0,0.316654886678627,0,0.170093705276516,0.431831832204279,0,0.541892875087706,0,0,0,0,0.219259876645935,0.261435451024901,0.256450125116389,0,0.976135183992909,2.26690225624989,0.0915694648183434,0.247528499761764,0,0,0,0.580024309752732,0.308097234229289,0.921022048356777,0.413509717453592,0.751941714077915,1.16013355131383,0.767039646744908,1.69160867728801,0,0,0,0,0,0,0,1.54016790088044,0,0,0,0.429374660225974,0.372158369359667,0.316379424718726,1.14378116354295,0.255897791311334,1.71175595213568,0,0.78494864019923,0.179872457583315,1.09814811894422,0.706874414074119,0,1.58510321173008,0,0,0.974853958525138,0,0,0.424216295861138,1.13008116620243,1.10273068709225,0,0.438450885253763,0,0,0.811641507850816,0.92947049429925,0.563391205064483,0.430234056612155,0.196498082026242,0.35667105148125,0.709522128141196,0.422215270595328,1.64647446479951,0,0.349934720244983,0,0,0,1.97701981631236,0,0,0,0,3.04468565539302,0.764637207142375,3.41788312304498,2.62054953003568,2.05681136543097,1.296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| ||
|short_description=p11@ZEB2 | |||
}} | }} |
Latest revision as of 07:43, 17 September 2015
Short description: | p11@ZEB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_ZEB2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -12bp_to_ENST00000462355_5end |
EntrezGene: | ZEB2 |
HGNC: | 14881 |
UniProt: | NA |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.12e-52 | 72 |
defensive cell | 9.90e-46 | 48 |
phagocyte | 9.90e-46 | 48 |
classical monocyte | 2.19e-44 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.19e-44 | 42 |
myeloid lineage restricted progenitor cell | 4.77e-44 | 66 |
granulocyte monocyte progenitor cell | 4.20e-43 | 67 |
monopoietic cell | 1.66e-40 | 59 |
monocyte | 1.66e-40 | 59 |
monoblast | 1.66e-40 | 59 |
promonocyte | 1.66e-40 | 59 |
macrophage dendritic cell progenitor | 1.31e-38 | 61 |
myeloid cell | 4.83e-28 | 108 |
common myeloid progenitor | 4.83e-28 | 108 |
leukocyte | 5.98e-23 | 136 |
hematopoietic lineage restricted progenitor cell | 8.76e-19 | 120 |
nongranular leukocyte | 2.96e-17 | 115 |
hematopoietic stem cell | 1.00e-14 | 168 |
hematopoietic oligopotent progenitor cell | 1.22e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.22e-14 | 161 |
hematopoietic cell | 5.15e-13 | 177 |
mesenchymal cell | 7.79e-12 | 354 |
connective tissue cell | 1.82e-11 | 361 |
multi fate stem cell | 9.19e-10 | 427 |
somatic stem cell | 3.15e-09 | 433 |
stem cell | 6.58e-09 | 441 |
motile cell | 7.57e-09 | 386 |
granulocyte | 1.32e-07 | 8 |
mast cell | 5.27e-07 | 5 |
basophil mast progenitor cell | 5.27e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.19e-42 | 76 |
hematopoietic system | 3.55e-41 | 98 |
blood island | 3.55e-41 | 98 |
bone element | 8.48e-38 | 82 |
hemolymphoid system | 3.05e-35 | 108 |
skeletal element | 8.46e-34 | 90 |
skeletal system | 1.14e-33 | 100 |
immune system | 3.34e-32 | 93 |
musculoskeletal system | 2.48e-23 | 167 |
lateral plate mesoderm | 3.50e-18 | 203 |
mesoderm | 9.09e-13 | 315 |
mesoderm-derived structure | 9.09e-13 | 315 |
presumptive mesoderm | 9.09e-13 | 315 |
connective tissue | 2.48e-11 | 371 |
regional part of cerebral cortex | 6.04e-07 | 22 |