FFCP PHASE1:Hg19::chr2:238767237..238767248,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr2:238767237..238767248,+ to FFCP PHASE1:Hg19::chr2:238767237..238767248,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10267 | |EntrezGene=10267 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9843 | |HGNC=9843 | ||
|TSSclassifier=strong | |||
|UniProt=E9PC20 | |UniProt=E9PC20 | ||
|association_with_transcript=-287bp_to_ENST00000404910_5end | |||
|cluster_id=chr2:238767237..238767248,+ | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_5_at_RAMP1_5end | |||
|id=chr2:238767237..238767248,+ | |||
|ontology_enrichment_celltype=CL:0000990!9.38e-11!8;CL:0000451!1.60e-08!10;CL:0000453!2.84e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000453;8.16e-50;5!CL:0000990;9.01e-43;8!CL:0000451;4.84e-35;10!CL:0000840;3.95e-11;5!CL:0001014;5.08e-09;2!CL:0001016;5.08e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,8.17e-50,5;CL:0000990,6.96e-43,8;CL:0000451,3.93e-35,10;CL:0000840,3.39e-11,5;CL:0001029,3.39e-11,5;CL:0001014,5.08e-09,2;CL:0001016,5.08e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;4.70e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.70e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.93e-22!115;UBERON:0001049!9.46e-14!57;UBERON:0005068!9.46e-14!57;UBERON:0006241!9.46e-14!57;UBERON:0007135!9.46e-14!57;UBERON:0001017!1.16e-13!82;UBERON:0000955!7.97e-13!69;UBERON:0006238!7.97e-13!69;UBERON:0005743!1.27e-12!86;UBERON:0000073!1.82e-12!94;UBERON:0001016!1.82e-12!94;UBERON:0001893!2.31e-12!34;UBERON:0002346!5.91e-12!90;UBERON:0002616!8.85e-12!59;UBERON:0002791!1.84e-11!33;UBERON:0002020!2.96e-11!34;UBERON:0003528!2.96e-11!34;UBERON:0003075!6.06e-11!86;UBERON:0007284!6.06e-11!86;UBERON:0002780!8.53e-11!41;UBERON:0001890!8.53e-11!41;UBERON:0006240!8.53e-11!41;UBERON:0001869!1.66e-10!32;UBERON:0003080!2.01e-10!42;UBERON:0000956!4.96e-07!25;UBERON:0000203!4.96e-07!25;UBERON:0002619!8.67e-07!22;UBERON:0000200!8.76e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;1.93e-16;1!UBERON:0001389;1.93e-16;1!UBERON:0000026;1.93e-16;1!UBERON:0008784;1.93e-16;1!UBERON:0006058;1.93e-16;1!UBERON:0003663;1.93e-16;1!UBERON:0004256;1.93e-16;1!UBERON:0004708;1.93e-16;1!UBERON:0002101;1.93e-16;1!UBERON:0004709;1.93e-16;1!UBERON:0002529;1.93e-16;1!UBERON:0010538;1.93e-16;1!UBERON:0003661;1.93e-16;1!UBERON:0010890;1.93e-16;1!UBERON:0002471;1.93e-16;1!UBERON:0001383;1.93e-16;1!UBERON:0010758;1.93e-16;1!UBERON:0010707;1.93e-16;1!UBERON:0000978;1.93e-16;1!UBERON:0002103;1.93e-16;1!UBERON:0001665;1.93e-16;1!UBERON:0003823;1.93e-16;1!UBERON:0000154;1.93e-16;1!UBERON:0010709;1.93e-16;1!UBERON:0005090;6.93e-09;2!UBERON:0001630;6.93e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,1.65e-16,1;UBERON:0001389,1.65e-16,1;UBERON:0000026,1.65e-16,1;UBERON:0008784,1.65e-16,1;UBERON:0006058,1.65e-16,1;UBERON:0003663,1.65e-16,1;UBERON:0004256,1.65e-16,1;UBERON:0004708,1.65e-16,1;UBERON:0002101,1.65e-16,1;UBERON:0004709,1.65e-16,1;UBERON:0002529,1.65e-16,1;UBERON:0010538,1.65e-16,1;UBERON:0003661,1.65e-16,1;UBERON:0010890,1.65e-16,1;UBERON:0002471,1.65e-16,1;UBERON:0001383,1.65e-16,1;UBERON:0004357,1.65e-16,1;UBERON:0004347,1.65e-16,1;UBERON:0005420,1.65e-16,1;UBERON:0005732,1.65e-16,1;UBERON:0010758,1.65e-16,1;UBERON:0010707,1.65e-16,1;UBERON:0000978,1.65e-16,1;UBERON:0002103,1.65e-16,1;UBERON:0001665,1.65e-16,1;UBERON:0003823,1.65e-16,1;UBERON:0000154,1.65e-16,1;UBERON:0010709,1.65e-16,1;UBERON:0005733,1.65e-16,1;UBERON:0005730,1.65e-16,1;UBERON:0006834,2.63e-16,1;UBERON:0005090,6.42e-09,2;UBERON:0001630,6.42e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.547497700291537,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0.324547393654683,0.870648686496336,1.86141144726411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.428933980974443,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0,0,0,0,0.385029108839245,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,5.1706449935739,0.635020748171649,0,0,0,0,0,1.18504244461122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0.329607748453519,0,0.597743964753209,0,0,0,0,0,0.0898683511473268,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0.219385397153973,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0.442306057399416,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0,0.176512253383001,0.225980740780532,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0.235694034616795,0.135904206073614,0.209205692624666,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0.403100834920358,0,0,0,0,0,0.196854963029498,0,0,0.817220436669454,0,0,0,3.14963448172101,0,0,0,0,0,0,0.179287339332845,0,0.714695326373367,0,0,0.542999601753713,0,0.326587360109409,0,0,0,0,0,0,0,0.39669780522807,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.625954653532499,0,0.332787154610557,0.18628920882415,0.415045904808692,0,0,4.28198000317451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0.168942440653073,0,0,0,0.414775308455192,23.1883767518872,7.04183653660824,16.1929740313286,0,0,0,0,0,0,0,0,0,0,0,1.07824811396682,0,0.109209638192014,0.33946505990805,0.212574920101683,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.345786262321089,0.322951291263702,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0.163771917510097,0.147856086217045,0.135075169236789,0,0.206686796501184,0.19024743058172,0,0,0.496211178389294,0,0,0,0,0,0,0.177404740325278,0,0,0.135939465953663,0.0657727735628491,0,1.55723962648897,0.078493092850514,0.157115589916002,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,1.29485767437579,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0.490296643507811,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0.160482733378337,0,0,0.286679166302903,0,0.339957450954573,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.151557396436479,0,0,0.413731983447581,0,0.23806443146374,0,0.186224142887574,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0.0898252021065869,0,1.1001729976458,0.813792356631477,0.665756774185513,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.547497700291537,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0.324547393654683,0.870648686496336,1.86141144726411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.428933980974443,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0,0,0,0,0.385029108839245,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,5.1706449935739,0.635020748171649,0,0,0,0,0,1.18504244461122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0.329607748453519,0,0.597743964753209,0,0,0,0,0,0.0898683511473268,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0.219385397153973,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0.442306057399416,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0,0.176512253383001,0.225980740780532,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0.235694034616795,0.135904206073614,0.209205692624666,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0.403100834920358,0,0,0,0,0,0.196854963029498,0,0,0.817220436669454,0,0,0,3.14963448172101,0,0,0,0,0,0,0.179287339332845,0,0.714695326373367,0,0,0.542999601753713,0,0.326587360109409,0,0,0,0,0,0,0,0.39669780522807,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.625954653532499,0,0.332787154610557,0.18628920882415,0.415045904808692,0,0,4.28198000317451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0.168942440653073,0,0,0,0.414775308455192,23.1883767518872,7.04183653660824,16.1929740313286,0,0,0,0,0,0,0,0,0,0,0,1.07824811396682,0,0.109209638192014,0.33946505990805,0.212574920101683,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.345786262321089,0.322951291263702,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0.163771917510097,0.147856086217045,0.135075169236789,0,0.206686796501184,0.19024743058172,0,0,0.496211178389294,0,0,0,0,0,0,0.177404740325278,0,0,0.135939465953663,0.0657727735628491,0,1.55723962648897,0.078493092850514,0.157115589916002,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,1.29485767437579,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0.490296643507811,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0.160482733378337,0,0,0.286679166302903,0,0.339957450954573,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.151557396436479,0,0,0.413731983447581,0,0.23806443146374,0,0.186224142887574,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0.0898252021065869,0,1.1001729976458,0.813792356631477,0.665756774185513,0,0 | ||
|short_description=p5@RAMP1 | |||
}} | }} |
Latest revision as of 05:06, 16 September 2015
Short description: | p5@RAMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RAMP1_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | -287bp_to_ENST00000404910_5end |
EntrezGene: | RAMP1 |
HGNC: | 9843 |
UniProt: | E9PC20 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 8.17e-50 | 5 |
conventional dendritic cell | 6.96e-43 | 8 |
dendritic cell | 3.93e-35 | 10 |
immature conventional dendritic cell | 3.39e-11 | 5 |
common dendritic progenitor | 3.39e-11 | 5 |
CD1a-positive Langerhans cell | 5.08e-09 | 2 |
immature CD1a-positive Langerhans cell | 5.08e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 1.65e-16 | 1 |
soleus muscle | 1.65e-16 | 1 |
appendage | 1.65e-16 | 1 |
lower limb segment | 1.65e-16 | 1 |
multi-limb segment region | 1.65e-16 | 1 |
hindlimb muscle | 1.65e-16 | 1 |
hindlimb zeugopod muscle | 1.65e-16 | 1 |
paired limb/fin | 1.65e-16 | 1 |
limb | 1.65e-16 | 1 |
pelvic appendage | 1.65e-16 | 1 |
limb segment | 1.65e-16 | 1 |
paired limb/fin segment | 1.65e-16 | 1 |
limb muscle | 1.65e-16 | 1 |
pelvic complex muscle | 1.65e-16 | 1 |
zeugopod | 1.65e-16 | 1 |
muscle of leg | 1.65e-16 | 1 |
paired limb/fin bud | 1.65e-16 | 1 |
limb bud | 1.65e-16 | 1 |
pelvic appendage bud | 1.65e-16 | 1 |
limb/fin field | 1.65e-16 | 1 |
subdivision of organism along appendicular axis | 1.65e-16 | 1 |
appendage girdle complex | 1.65e-16 | 1 |
leg | 1.65e-16 | 1 |
hindlimb | 1.65e-16 | 1 |
triceps surae | 1.65e-16 | 1 |
hindlimb zeugopod | 1.65e-16 | 1 |
posterior region of body | 1.65e-16 | 1 |
pelvic complex | 1.65e-16 | 1 |
limb field | 1.65e-16 | 1 |
hindlimb/pelvic fin field | 1.65e-16 | 1 |
uterus or analog | 2.63e-16 | 1 |
muscle structure | 6.42e-09 | 2 |
muscle organ | 6.42e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.70e-09 | 2 |