FFCP PHASE1:Hg19::chr2:239067597..239067619,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:239067597..239067619,+ to FFCP PHASE1:Hg19::chr2:239067597..239067619,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=151176 | |EntrezGene=151176 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26727 | |HGNC=26727 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000486834_5end | |||
|cluster_id=chr2:239067597..239067619,+ | |||
|description=CAGE_peak_1_at_FAM132B_5end | |||
|id=chr2:239067597..239067619,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.98e-12!180;CL:0002321!1.04e-08!248;CL:0000220!1.24e-08!246;CL:0000333!3.70e-07!41;CL:1000449!3.97e-07!16;CL:0000066!5.00e-07!254;CL:1000507!8.51e-07!12;CL:1000494!8.51e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.74e-10;10!CL:1000494;1.74e-10;10!CL:1000449;2.79e-09;15!CL:1000497;1.02e-07;17!CL:0002518;1.02e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.64e-10,10;CL:1000494,1.64e-10,10;CL:1000449,2.70e-09,15;CL:0002321,4.35e-08,250;CL:1000497,9.90e-08,17;CL:0002518,9.90e-08,17;CL:0000188,4.33e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.21e-17!235;DOID:14566!2.52e-16!239;DOID:0050687!8.25e-14!143;DOID:305!1.03e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.19e-09,235;DOID:14566,3.95e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0003104!2.75e-08!238;UBERON:0009142!2.75e-08!238;UBERON:0002113!4.29e-08!27;UBERON:0003918!4.29e-08!27;UBERON:0005095!4.29e-08!27;UBERON:0007687!4.29e-08!27;UBERON:0003103!6.24e-08!69;UBERON:0006554!2.21e-07!44;UBERON:0004211!3.97e-07!16;UBERON:0001285!3.97e-07!16;UBERON:0007684!3.97e-07!16;UBERON:0003220!3.97e-07!16;UBERON:0004208!3.97e-07!16;UBERON:0002100!4.69e-07!216;UBERON:0006555!4.81e-07!17;UBERON:0005103!4.81e-07!17;UBERON:0000083!4.81e-07!17;UBERON:0009201!4.81e-07!17;UBERON:0004819!4.81e-07!17;UBERON:0006553!4.81e-07!17;UBERON:0003074!4.81e-07!17;UBERON:0003060!4.81e-07!17;UBERON:0005256!5.11e-07!143;UBERON:0001008!6.57e-07!45;UBERON:0009773!8.51e-07!12;UBERON:0001231!8.51e-07!12;UBERON:0004810!8.51e-07!12;UBERON:0000489!9.48e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.74e-10;10!UBERON:0009773;1.74e-10;10!UBERON:0001231;1.74e-10;10!UBERON:0004810;1.74e-10;10!UBERON:0002113;1.07e-09;24!UBERON:0011143;1.07e-09;24!UBERON:0006555;2.79e-09;15!UBERON:0004819;2.79e-09;15!UBERON:0001285;2.79e-09;15!UBERON:0007684;2.79e-09;15!UBERON:0006554;1.25e-08;30!UBERON:0001008;1.25e-08;30!UBERON:0000489;6.46e-08;29!UBERON:0001134;4.68e-07;16!UBERON:0002036;4.68e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.64e-10,10;UBERON:0004211,2.70e-09,15;UBERON:0009773,2.70e-09,15;UBERON:0001231,2.70e-09,15;UBERON:0001285,2.70e-09,15;UBERON:0007684,2.70e-09,15;UBERON:0004208,2.70e-09,15;UBERON:0006555,1.84e-08,16;UBERON:0004819,1.84e-08,16;UBERON:0002113,2.12e-08,26;UBERON:0003918,2.12e-08,26;UBERON:0011143,2.12e-08,26;UBERON:0005095,2.12e-08,26;UBERON:0007687,2.12e-08,26;UBERON:0003104,2.84e-08,160;UBERON:0009142,2.84e-08,160;UBERON:0003103,7.82e-08,68;UBERON:0000489,7.11e-07,31 | |||
|phase1_expression=0,0.642301571672949,0.281908808191942,0,0,0,0,0.631719873426831,0,0,0.697801167972428,0,0,1.23766352960047,2.31978163009541,0,0.602694528023977,0,0,1.47745269692145,1.22400414746552,1.25381888591235,0.572471974262113,2.32686522623903,3.51519390865448,0,0,0,0,0.383829398097213,0.464448369948228,0,0.30120591877825,1.84877005083394,0,0,0,0,0.401088894940283,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,1.35426486594342,0.188242339542605,0,0,0,0.641858054152187,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55725123687061,1.80719576192283,5.51471701699479,3.47631645505977,0,5.83961844363163,0.661743720148475,0.443458794925128,0.43917392846563,0.327447688744282,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,1.25396979922086,0,0,0,0,0,0,0,0,0,0,0.112611480483322,1.53316637465883,0.949265659568129,0.549605231791222,0,0,1.74437620857014,0.993943903390637,0.506522046658319,0.132409180813219,0.573673241497627,0.354668382198357,1.68203280042692,7.47242970107935,0.98667019366864,0,1.34710672069688,0.980771418680752,0.908144565869588,0,0.937285727335186,0.312160076830321,0,0,1.17434498643765,1.61872944368132,0.842704840213491,0.204154171254893,0.245668634623536,0.206651562351531,2.37600571456411,14.3414818981563,0.910161361938026,0.718618141816238,0.336672227908132,0.125118519871964,0.554128230968366,4.82875382968922,2.45190236639216,12.4697588892475,2.26864366320042,0.717558542755448,1.49490172172997,0.635795703478686,0.300091096084402,0,0,0.37223371266318,1.18143432568886,0.0974370051611986,0.252433774244115,0.184099797284599,0.484938170456436,1.06502877754984,0.503760491138201,2.20428770003634,0,0,0,0.487894824518382,0.397589304964456,0.580969714347592,0.932949495138334,1.00928340350251,0.36497735907583,0,1.28648187638577,1.38134921352481,0.464367928031979,0,0.828147600278907,0.168584690078102,0,0.330881918197182,0.653638332277218,1.18635309555548,0.404493924480493,0.98110732562673,0,0,11.2193419042757,1.6462960453256,0,0,0,0.590789906681404,0,0.122988438543114,0.343135620597051,0.109750285408626,1.1240175325762,0.502644862058154,0.0925884451585296,2.93227474779292,0,0,0.34779121492523,0.234817388471643,0.144366447761074,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0.716468181622786,0.871901815541886,1.15014803749563,0,0,0,0,0,1.26995788584338,0,0,1.71072446022705,0.308482478109971,0.300343057843917,0.285826432630578,0.448524337381443,0,0.51336800074665,0,0,0,0,0,0.771622122786426,0,0.266422179016099,2.28764789853036,0,0,0.977208552881205,0,0.791951872933429,0,0,0,0,0,0,3.59437283237374,1.14861935834114,1.42636905040718,2.75084482668401,1.64381058040307,7.52056045607561,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,4.04881922673162,0.500170521059677,0.542530047399471,0,0.892144943985809,0.157702415033935,0,0,0,1.03473071292505,0,1.10621501125022,0.0868836144680828,0.391602314925481,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0.561320188866147,0.256278298511402,0.511707249066704,0.64341568457443,0,0.616838775210622,0.887808626565635,0.246381468041427,0.519254429183621,0.464841513839837,0.120859449591622,0,0.920809889358963,1.60740227430449,1.0925470080403,4.19598127870157,5.86559496779635,2.0794141018192,41.5705377663733,13.1525302187935,4.53872004239366,0,0.170093705276516,18.1369369525797,32.3877230649608,4.06419656315779,12.0405545725165,4.33289664176565,1.66215201785745,6.49236788694317,89.4580296715413,139.083659945247,0.512900250232778,0.328014645699706,0.650756789328606,0,4.57847324091717,3.05285149706176,1.14853107599234,1.30012049207304,0,2.51343867559517,1.54048617114644,2.14905144616581,1.37836572484531,3.22260734604821,1.88521702088497,1.87498580315422,2.58192903375538,1.65284915360978,2.11409074101617,0.638063562472921,3.0347334256665,0.464845549297286,1.25924938732256,0,0,1.59691809095107,0,0,0.429374660225974,0.744316738719335,0.316379424718726,0.190630193923825,0,0.855877976067841,1.90921948755562,0,3.41757669408298,1.64722217841633,2.5918728516051,1.01091240786658,0,0.842516912477962,4.38870365180631,0.974853958525138,1.05650146756755,1.63799893689583,0.989838023675989,1.13008116620243,0.551365343546124,1.32687795048244,0,1.15755106853338,0,0,0.30982349809975,0.563391205064483,0.286822704408103,0.196498082026242,0,2.48332744849418,1.68886108238131,3.62224382255892,0,0,1.05844323998063,1.34060455107157,7.62236894029258,0.0941438007767792,0.43050537267123,5.05414427002877,0,0,0.507447609232169,0,0.569647187174163,0,0,0,0,0,1.38871292465715,0.962479855263359,0.735120647943095,2.04383492638291,0,2.06311345710401,0.956557636372934,1.79621434289535,0,0.423347165447766,0,0,0.456469358066384,0.156679895773023,0,0.50787533340481,0.1605880751037,0,1.27753871307098,0,3.99412993600995,2.23676107892416,3.17013369252626,0.19538809540204,0,39.387967663268,1.35227839237992,0,0,0,0.14650817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| ||
|short_description=p1@FAM132B | |||
}} | }} |
Latest revision as of 05:34, 16 September 2015
Short description: | p1@FAM132B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM132B_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENST00000486834_5end |
EntrezGene: | FAM132B |
HGNC: | 26727 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.64e-10 | 10 |
nephron tubule epithelial cell | 1.64e-10 | 10 |
epithelial cell of nephron | 2.70e-09 | 15 |
embryonic cell | 4.35e-08 | 250 |
kidney cell | 9.90e-08 | 17 |
kidney epithelial cell | 9.90e-08 | 17 |
cell of skeletal muscle | 4.33e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 1.64e-10 | 10 |
nephron epithelium | 2.70e-09 | 15 |
renal tubule | 2.70e-09 | 15 |
nephron tubule | 2.70e-09 | 15 |
nephron | 2.70e-09 | 15 |
uriniferous tubule | 2.70e-09 | 15 |
nephrogenic mesenchyme | 2.70e-09 | 15 |
excretory tube | 1.84e-08 | 16 |
kidney epithelium | 1.84e-08 | 16 |
kidney | 2.12e-08 | 26 |
kidney mesenchyme | 2.12e-08 | 26 |
upper urinary tract | 2.12e-08 | 26 |
kidney rudiment | 2.12e-08 | 26 |
kidney field | 2.12e-08 | 26 |
mesenchyme | 2.84e-08 | 160 |
entire embryonic mesenchyme | 2.84e-08 | 160 |
compound organ | 7.82e-08 | 68 |
cavitated compound organ | 7.11e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.19e-09 | 235 |
disease of cellular proliferation | 3.95e-08 | 239 |