FFCP PHASE1:Hg19::chr3:67706055..67706059,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:67706055..67706059,+ | |||
|description=CAGE_peak_at_chr3:67706055..67706059,+ | |||
|id=chr3:67706055..67706059,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.89e-44!140;CL:0002031!1.41e-41!124;CL:0002032!2.98e-41!165;CL:0000837!2.98e-41!165;CL:0002087!2.69e-40!119;CL:0000037!3.35e-40!172;CL:0000566!3.35e-40!172;CL:0000988!5.93e-37!182;CL:0000860!2.50e-33!45;CL:0002057!1.22e-31!42;CL:0000766!4.40e-26!76;CL:0000839!1.14e-25!70;CL:0000557!3.62e-25!71;CL:0000763!3.78e-24!112;CL:0000049!3.78e-24!112;CL:0002194!5.12e-24!63;CL:0000576!5.12e-24!63;CL:0000040!5.12e-24!63;CL:0000559!5.12e-24!63;CL:0002009!5.32e-23!65;CL:0000838!5.62e-16!52;CL:0000542!1.51e-15!53;CL:0000051!1.51e-15!53;CL:0000084!2.93e-15!25;CL:0000827!2.93e-15!25;CL:0000134!1.24e-11!358;CL:0002320!4.52e-11!365;CL:0000219!4.07e-09!390;CL:0000791!3.24e-08!18;CL:0000789!3.24e-08!18;CL:0002420!3.24e-08!18;CL:0002419!3.24e-08!18;CL:0000790!3.24e-08!18;CL:0000623!2.24e-07!3;CL:0000825!2.24e-07!3;CL:0000898!2.76e-07!3;CL:0000048!7.59e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.26e-40;33!CL:0002057;1.26e-40;33!CL:0000473;6.61e-29;39!CL:0000234;6.61e-29;39!CL:0000576;1.29e-18;48!CL:0002127;3.07e-14;1!CL:0000911;3.07e-14;1!CL:0000814;3.07e-14;1!CL:0000766;2.44e-09;69!CL:0002087;1.57e-08;104!CL:0000763;2.09e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.27e-34,42;CL:0002057,1.27e-34,42;CL:0000473,3.81e-30,48;CL:0000234,3.81e-30,48;CL:0000839,2.64e-25,66;CL:0000557,6.52e-25,67;CL:0002194,7.18e-24,59;CL:0000576,7.18e-24,59;CL:0000040,7.18e-24,59;CL:0000559,7.18e-24,59;CL:0000766,4.13e-23,72;CL:0002009,4.64e-23,61;CL:0002031,1.94e-21,120;CL:0002087,1.99e-19,115;CL:0000738,9.70e-19,136;CL:0002032,1.40e-15,161;CL:0000837,1.40e-15,161;CL:0000763,5.33e-15,108;CL:0000049,5.33e-15,108;CL:0000037,7.29e-15,168;CL:0002127,3.08e-14,1;CL:0000914,3.08e-14,1;CL:0000911,3.08e-14,1;CL:0000814,3.08e-14,1;CL:0002042,3.08e-14,1;CL:0002039,3.08e-14,1;CL:0002040,3.08e-14,1;CL:0002041,3.08e-14,1;CL:0000988,5.06e-14,177;CL:0000893,9.25e-08,2;CL:0002489,9.25e-08,2;CL:0000809,9.25e-08,2;CL:0000808,9.25e-08,2;CL:0000894,9.25e-08,2;CL:0000806,9.25e-08,2;CL:0000807,9.25e-08,2;CL:0000805,9.25e-08,2;CL:0002425,9.25e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;4.92e-23;42!CL:0002425;9.24e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.29e-23!102;UBERON:0003061!1.29e-23!102;UBERON:0002193!1.08e-21!112;UBERON:0002371!3.18e-21!80;UBERON:0002405!1.85e-19!115;UBERON:0001474!4.62e-19!86;UBERON:0004765!8.23e-15!101;UBERON:0001434!8.23e-15!101;UBERON:0002384!1.72e-11!375;UBERON:0004177!1.18e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.70e-07;2!UBERON:0005058;1.70e-07;2!UBERON:0009113;1.70e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,2.47e-24,93;UBERON:0002390,5.03e-23,98;UBERON:0003061,5.03e-23,98;UBERON:0002371,7.75e-22,76;UBERON:0002193,9.14e-21,108;UBERON:0001474,3.72e-20,82;UBERON:0004765,2.94e-18,90;UBERON:0001434,2.64e-16,100;UBERON:0002370,1.72e-13,4;UBERON:0005058,1.72e-13,4;UBERON:0009113,1.72e-13,4;UBERON:0003295,1.72e-13,4;UBERON:0005562,1.72e-13,4;UBERON:0003081,2.70e-10,203;UBERON:0003351,2.66e-09,6;UBERON:0002204,3.45e-09,167;UBERON:0004177,4.27e-08,7;UBERON:0005057,4.27e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0.651032612147555,0,0,0,0.145398238779565,0.377875943688809,1.4555043671269,0.232429036905685,0.822335776043652,0.619412741790207,0,0.512321413058201,0.47296445977717,0.689491361473237,1.29096936716765,2.70852973188684,0.564727018627814,0.272906150057846,1.34834090667051,1.22433556948361,0.320929027076094,1.27867425159808,0,0.199463657621632,0,0.580418477257168,0,3.73693349397345,0.502497330513487,1.5644487552606,1.3031330682307,1.21079900526674,2.20966581592539,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0.616804496998528,0,0.32592226663359,0,0,0,0.589211814949674,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0.766440987203842,0.34362744548263,0,0.318565414324097,0,0,0,0,0,0.236777252044017,0,0,0.802320587350522,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0.174129737299267,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.288239906833923,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.38885320763105,0.394061520403854,1.07813787429759,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0.423347165447766,0,0,0.456469358066384,0,0,0.338583555603207,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0,0,0,0,0,0,0.494411622680279,0,0,0.276283915531148,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0.317873157960757,0,0,0.141353071433941,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0,0.60129367765797,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0.197611631897944,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0.194860308839388,0.531459361253452,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606229585745915,0.267964130156178,0,0,0,0,0,1.05527014302958,0,0,0,0,0,0.202056159043763,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr3:67706055..67706059,+ | |||
}} | }} |
Latest revision as of 23:17, 29 July 2015
Short description: | p@chr3:67706055..67706059, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:67706055..67706059, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immune system | 2.47e-24 | 93 |
hematopoietic system | 5.03e-23 | 98 |
blood island | 5.03e-23 | 98 |
bone marrow | 7.75e-22 | 76 |
hemolymphoid system | 9.14e-21 | 108 |
bone element | 3.72e-20 | 82 |
skeletal element | 2.94e-18 | 90 |
skeletal system | 2.64e-16 | 100 |
thymus | 1.72e-13 | 4 |
hemolymphoid system gland | 1.72e-13 | 4 |
thymic region | 1.72e-13 | 4 |
pharyngeal gland | 1.72e-13 | 4 |
thymus primordium | 1.72e-13 | 4 |
lateral plate mesoderm | 2.70e-10 | 203 |
pharyngeal epithelium | 2.66e-09 | 6 |
musculoskeletal system | 3.45e-09 | 167 |
hemopoietic organ | 4.27e-08 | 7 |
immune organ | 4.27e-08 | 7 |