FFCP PHASE1:Hg19::chr5:77844980..77844994,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10184 | |EntrezGene=10184 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6588 | |HGNC=6588 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_ENST00000515007_5end | |||
|cluster_id=chr5:77844980..77844994,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_11_at_LHFPL2_5end | |||
|id=chr5:77844980..77844994,- | |||
|ontology_enrichment_celltype=CL:0002057!2.33e-71!42;CL:0000860!5.89e-66!45;CL:0002194!5.50e-63!63;CL:0000576!5.50e-63!63;CL:0000040!5.50e-63!63;CL:0000559!5.50e-63!63;CL:0002009!9.65e-61!65;CL:0000839!1.10e-55!70;CL:0000557!9.26e-55!71;CL:0000766!2.91e-53!76;CL:0000763!1.29e-36!112;CL:0000049!1.29e-36!112;CL:0002087!3.15e-30!119;CL:0002031!6.24e-27!124;CL:0000738!1.48e-25!140;CL:0002032!2.61e-21!165;CL:0000837!2.61e-21!165;CL:0000037!3.11e-21!172;CL:0000566!3.11e-21!172;CL:0000988!1.86e-19!182;CL:0000134!8.54e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.57e-101;33!CL:0002057;7.57e-101;33!CL:0000473;2.99e-69;39!CL:0000234;2.99e-69;39!CL:0000576;3.03e-50;48!CL:0000766;3.22e-25;69!CL:0000763;1.50e-14;100!CL:0000840;9.53e-13;5!CL:0002087;3.33e-12;104!CL:0000738;2.28e-09;136!CL:0000990;1.15e-08;8!CL:0000451;3.58e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.05e-88,42;CL:0002057,3.05e-88,42;CL:0002194,1.83e-79,59;CL:0000576,1.83e-79,59;CL:0000040,1.83e-79,59;CL:0000559,1.83e-79,59;CL:0000473,8.48e-77,48;CL:0000234,8.48e-77,48;CL:0002009,8.64e-77,61;CL:0000839,8.37e-71,66;CL:0000557,1.03e-69,67;CL:0000766,1.06e-64,72;CL:0000763,3.59e-42,108;CL:0000049,3.59e-42,108;CL:0002087,2.07e-39,115;CL:0002031,1.24e-37,120;CL:0000738,8.11e-33,136;CL:0002032,3.44e-27,161;CL:0000837,3.44e-27,161;CL:0000037,6.55e-26,168;CL:0000988,2.06e-24,177;CL:0000840,9.53e-13,5;CL:0001029,9.53e-13,5;CL:0000134,2.56e-10,354;CL:0002320,4.84e-10,361;CL:0000219,4.58e-09,386;CL:0000990,1.15e-08,8;CL:0000048,7.22e-08,427;CL:0000723,1.06e-07,433;CL:0000034,1.73e-07,441;CL:0000451,3.58e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;7.57e-65;42!CL:0000049;1.00e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.88e-47!80;UBERON:0001474!2.01e-43!86;UBERON:0002390!4.13e-41!102;UBERON:0003061!4.13e-41!102;UBERON:0002193!1.87e-36!112;UBERON:0004765!1.96e-35!101;UBERON:0001434!1.96e-35!101;UBERON:0002405!2.59e-33!115;UBERON:0002204!1.15e-19!167;UBERON:0003081!1.42e-14!216;UBERON:0002619!1.20e-07!22;UBERON:0000062!1.69e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.69e-61,76;UBERON:0001474,1.74e-56,82;UBERON:0004765,3.26e-51,90;UBERON:0002405,1.82e-49,93;UBERON:0002390,8.64e-47,98;UBERON:0003061,8.64e-47,98;UBERON:0001434,8.57e-46,100;UBERON:0002193,3.59e-42,108;UBERON:0002204,4.36e-26,167;UBERON:0003081,7.95e-21,203;UBERON:0000926,4.41e-12,315;UBERON:0004120,4.41e-12,315;UBERON:0006603,4.41e-12,315;UBERON:0002384,1.15e-09,371 | |||
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| ||
|short_description=p11@LHFPL2 | |||
}} | }} |
Latest revision as of 20:36, 18 September 2015
Short description: | p11@LHFPL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_LHFPL2_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -6bp_to_ENST00000515007_5end |
EntrezGene: | LHFPL2 |
HGNC: | 6588 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.69e-61 | 76 |
bone element | 1.74e-56 | 82 |
skeletal element | 3.26e-51 | 90 |
immune system | 1.82e-49 | 93 |
hematopoietic system | 8.64e-47 | 98 |
blood island | 8.64e-47 | 98 |
skeletal system | 8.57e-46 | 100 |
hemolymphoid system | 3.59e-42 | 108 |
musculoskeletal system | 4.36e-26 | 167 |
lateral plate mesoderm | 7.95e-21 | 203 |
mesoderm | 4.41e-12 | 315 |
mesoderm-derived structure | 4.41e-12 | 315 |
presumptive mesoderm | 4.41e-12 | 315 |
connective tissue | 1.15e-09 | 371 |