FFCP PHASE1:Hg19::chr6:41168871..41168911,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:41168871..41168911,- to FFCP PHASE1:Hg19::chr6:41168871..41168911,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79865 | |EntrezGene=79865 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21092 | |HGNC=21092 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T2D2 | |UniProt=Q5T2D2 | ||
|association_with_transcript=13bp_to_NM_024807,uc010jxm.1_5end | |||
|cluster_id=chr6:41168871..41168911,- | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_1_at_TREML2_5end | |||
|id=chr6:41168871..41168911,- | |||
|ontology_enrichment_celltype=CL:0000037!9.14e-62!172;CL:0000566!9.14e-62!172;CL:0002032!1.93e-56!165;CL:0000837!1.93e-56!165;CL:0000988!3.75e-56!182;CL:0000738!1.61e-45!140;CL:0002087!1.04e-38!119;CL:0000763!6.35e-36!112;CL:0000049!6.35e-36!112;CL:0002031!7.63e-35!124;CL:0002057!2.26e-26!42;CL:0000860!1.03e-23!45;CL:0000766!3.80e-22!76;CL:0000945!1.71e-18!24;CL:0000826!1.71e-18!24;CL:0000839!1.75e-18!70;CL:0002194!2.12e-18!63;CL:0000576!2.12e-18!63;CL:0000040!2.12e-18!63;CL:0000559!2.12e-18!63;CL:0000542!1.38e-17!53;CL:0000051!1.38e-17!53;CL:0002009!2.05e-17!65;CL:0000838!6.69e-17!52;CL:0000557!1.27e-15!71;CL:0000236!7.35e-15!14;CL:0000134!7.44e-11!358;CL:0002320!4.48e-10!365;CL:0000094!1.18e-07!8;CL:0000219!1.93e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.33e-19;33!CL:0002057;1.33e-19;33!CL:0000945;8.81e-18;24!CL:0000236;1.60e-14;13!CL:0000473;3.64e-14;39!CL:0000234;3.64e-14;39!CL:0000576;1.15e-11;48!CL:0000763;1.27e-10;100!CL:0000094;8.60e-10;8!CL:0000738;1.84e-09;136!CL:0002087;1.71e-08;104!CL:0000766;2.66e-08;69!CL:0000775;8.87e-08;3!CL:0000988;1.43e-07;177!CL:0000542;6.48e-07;53!CL:0000081;7.72e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.27e-42,168;CL:0002032,1.09e-40,161;CL:0000837,1.09e-40,161;CL:0000988,3.37e-39,177;CL:0000738,4.46e-32,136;CL:0002087,6.77e-29,115;CL:0000763,1.11e-28,108;CL:0000049,1.11e-28,108;CL:0002031,4.43e-26,120;CL:0000766,3.18e-21,72;CL:0000860,3.41e-21,42;CL:0002057,3.41e-21,42;CL:0000945,5.84e-18,24;CL:0000826,5.84e-18,24;CL:0000473,1.22e-17,48;CL:0000234,1.22e-17,48;CL:0000839,4.94e-17,66;CL:0002194,8.23e-17,59;CL:0000576,8.23e-17,59;CL:0000040,8.23e-17,59;CL:0000559,8.23e-17,59;CL:0000236,1.71e-16,14;CL:0002009,5.16e-16,61;CL:0000557,6.47e-14,67;CL:0000542,8.55e-11,53;CL:0000051,8.55e-11,53;CL:0000134,4.04e-10,354;CL:0000838,5.25e-10,52;CL:0000094,7.87e-10,8;CL:0002320,1.37e-09,361;CL:0000775,8.93e-08,3;CL:0000219,9.51e-08,386;CL:0000081,7.26e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.31e-16;42!CL:0000049;1.00e-09;108!CL:0000051;6.48e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!9.86e-15!51;DOID:0060083!9.86e-15!51;DOID:1240!1.57e-13!39;DOID:8692!1.08e-10!31;DOID:1036!7.98e-08!8 | |||
|ontology_enrichment_disease_v019=DOID:1240;6.42e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.78e-09,39;DOID:2531,4.47e-08,51;DOID:0060083,4.47e-08,51;DOID:8692,4.86e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.57e-24!102;UBERON:0003061!1.57e-24!102;UBERON:0002193!1.55e-22!112;UBERON:0002371!4.75e-14!80;UBERON:0001474!3.87e-12!86;UBERON:0002405!2.98e-11!115;UBERON:0000178!8.28e-10!15;UBERON:0000179!8.28e-10!15;UBERON:0000463!8.28e-10!15;UBERON:0002384!2.07e-09!375;UBERON:0004765!1.71e-08!101;UBERON:0001434!1.71e-08!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.94e-14;15!UBERON:0000179;4.94e-14;15!UBERON:0000463;4.94e-14;15!UBERON:0002390;5.21e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.15e-23,98;UBERON:0003061,2.15e-23,98;UBERON:0002193,2.05e-21,108;UBERON:0000178,4.29e-14,15;UBERON:0000179,4.29e-14,15;UBERON:0000463,4.29e-14,15;UBERON:0002371,1.96e-12,76;UBERON:0002405,2.06e-12,93;UBERON:0001474,5.52e-11,82;UBERON:0004765,2.28e-09,90;UBERON:0002384,7.20e-09,371;UBERON:0001434,9.63e-08,100;UBERON:0003081,9.33e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916960868975415,1.14940825229924,1.57421562627358,2.75354993794233,0,0.309632246632152,0,0,0,0.232401601740905,0,0.293600439334847,1.10799081706375,1.80490002723128,1.51907609501096,0,0,0,1.30858414901608,0.377875943688809,0.727752183563449,2.32429036905685,0.411167888021826,0.929119112685311,7.48000220037591,4.09857130446561,5.20260905754887,1.72372840368309,1.93645405075148,1.35426486594342,1.69418105588344,0.272906150057846,1.12361742222542,0.918251677112708,1.28371610830437,0.639337125799041,7.91643120448119,3.39088217956774,5.54092175692502,1.7412554317715,0,2.4912889959823,6.28121663141858,4.17186334736161,7.16723187526885,1.81619850790011,0,0.632924774881769,0,0.212604299965044,0,1.34794357375794,1.05123824989054,0.48217676009124,0.855038231223746,0.39783335439818,0,7.03984977845291,6.00752472388345,6.22656477704488,4.69403244823158,4.80475184443215,8.62128659931725,11.2377628373427,3.81621501814146,0.569212969109448,1.76171156811282,2.6759125968766,1.32171328579026,0,0.263384084775077,0,0.393010762749165,0,3.34372990781356,0,0,0,2.56244050835899,0,0.221533894583621,0.270803863765016,6.40456598628376,5.9827299877544,1.15106533222573,2.21080014228679,2.60822777161547,1.33457906845854,0.535081656179426,0,1.81294948316106,0.766440987203842,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.301150238155546,0.511946444617674,1.24930726552346,0.947109008176067,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,1.5062593682237,0,0,2.27183175558278,1.91542711029194,3.32394901297163,0.953962497221368,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1314542666882,15.511210565933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0,0.256686072559497,0,0,0,0,0,11.2351053592077,29.9161459204025,24.4505152927261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,2.37285620900479,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,3.50815802633495,4.18296721639841,0,0,0,7.93415789687461,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,6.02520324971387,0,0,0,0,4.05958087385735,4.58782324285425,5.69647187174163,4.2881719582402,6.17043409629291,1.94541993357815,4.32025149790492,3.96562588147135,0,0,0,1.30062222588003,0.144269212976445,1.70740424036194,0.637705090915289,0.997896857164083,0.383010740264733,0.211673582723883,0,1.68478306868075,0,0.156679895773023,2.50634477090067,0.677167111206413,0.1605880751037,0,3.40676990152261,1.71752672377882,0,0,0,1.36771666781428,0,3.69262196843137,1.6227340708559,0,0,0,0,0,3.90051844971174,0,0,0,0,0,0.140669416410513,0,0,0,0,0.828851746593443,0,0,0,0,0.359473404589307,0,2.04628948090749,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1528195219403,1.34636466614658,0.651884231532048,0,0,0,2.04386596391473,0.470940769185074,1.66211681900156,1.1279783030859,0.980312671588698,1.51039428278258,0.569261198172555,1.74830236878417,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0.364909578431332,0.391329237864179,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0.435296032902013,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,2.79421995817089,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0.662091970365432,0,0,0,0,0,4.26881107896563,0,0,0,1.32506888912221,0,0,0,0,0.213574825135389,0,0,3.47316215268366,0,0.365377795142688,0,0,0,0,0,0.628216385000937,0.886068179966986,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.327130788511688,0,0,0,0,0.746842107858986,1.54993481694734,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0.0752103283492573,0,0,0,0.982631505060581,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,29.2717821536708,6.56833729067942,0,0,0,0,0,0,0,1.40136081656895,0,0,0,0.0714765441766563,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0,0.883352102537187,0.121917924982269,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,126.985670017611,0,0.707029641304878,0,0,0.4226557275834,0,0.845855261818682,1.35361564744512,0.0999411559249289,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0.101988829741982,1.06886962106224,0.18378979906969,0,2.27336094654718,4.82335434281121,0,0.103432995861895,0.213233981900981,0.23806443146374,2.1314340245882,1.30356900021302,0,0,0,0,0,0.673520530145875,0.215166616178029,0,0,0,0,0,0,0,0,0,1.00636896795513,5.77023286145819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 | ||
|short_description=p1@TREML2 | |||
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Latest revision as of 18:20, 18 September 2015
Short description: | p1@TREML2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TREML2_5end |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | 13bp_to_NM_024807, uc010jxm.1_5end |
EntrezGene: | TREML2 |
HGNC: | 21092 |
UniProt: | Q5T2D2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.15e-23 | 98 |
blood island | 2.15e-23 | 98 |
hemolymphoid system | 2.05e-21 | 108 |
blood | 4.29e-14 | 15 |
haemolymphatic fluid | 4.29e-14 | 15 |
organism substance | 4.29e-14 | 15 |
bone marrow | 1.96e-12 | 76 |
immune system | 2.06e-12 | 93 |
bone element | 5.52e-11 | 82 |
skeletal element | 2.28e-09 | 90 |
connective tissue | 7.20e-09 | 371 |
skeletal system | 9.63e-08 | 100 |
lateral plate mesoderm | 9.33e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.78e-09 | 39 |
hematologic cancer | 4.47e-08 | 51 |
immune system cancer | 4.47e-08 | 51 |
myeloid leukemia | 4.86e-07 | 31 |