FFCP PHASE1:Hg19::chr7:45067283..45067315,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:45067283..45067315,+ to FFCP PHASE1:Hg19::chr7:45067283..45067315,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83605 | |EntrezGene=83605 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21708 | |HGNC=21708 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000472223_5end | |||
|cluster_id=chr7:45067283..45067315,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_3_at_CCM2_5end | |||
|id=chr7:45067283..45067315,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.00e-74!172;CL:0000566!4.00e-74!172;CL:0002032!1.37e-69!165;CL:0000837!1.37e-69!165;CL:0000988!4.49e-66!182;CL:0000738!1.74e-63!140;CL:0002031!1.61e-53!124;CL:0002087!3.01e-53!119;CL:0000763!1.47e-36!112;CL:0000049!1.47e-36!112;CL:0000542!9.45e-30!53;CL:0000051!9.45e-30!53;CL:0000838!2.07e-29!52;CL:0000766!8.49e-27!76;CL:0000557!3.52e-23!71;CL:0000839!1.49e-22!70;CL:0002009!1.40e-21!65;CL:0002194!7.36e-21!63;CL:0000576!7.36e-21!63;CL:0000040!7.36e-21!63;CL:0000559!7.36e-21!63;CL:0002057!1.98e-20!42;CL:0000860!7.73e-18!45;CL:0000084!7.99e-16!25;CL:0000827!7.99e-16!25;CL:0000134!1.05e-14!358;CL:0000791!3.16e-14!18;CL:0000789!3.16e-14!18;CL:0002420!3.16e-14!18;CL:0002419!3.16e-14!18;CL:0000790!3.16e-14!18;CL:0002320!2.28e-13!365;CL:0000945!5.79e-13!24;CL:0000826!5.79e-13!24;CL:0000236!3.06e-10!14;CL:0000219!4.22e-10!390;CL:0000625!2.97e-09!11;CL:0000048!4.38e-07!430;CL:0000034!6.56e-07!444;CL:0000723!7.78e-07!436;CL:0002393!9.79e-07!9;CL:0002397!9.79e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000542;3.53e-21;53!CL:0000084;2.18e-19;25!CL:0002087;2.70e-19;104!CL:0000791;2.24e-18;18!CL:0000789;2.24e-18;18!CL:0002419;2.24e-18;18!CL:0000860;5.76e-18;33!CL:0002057;5.76e-18;33!CL:0000576;9.49e-18;48!CL:0000473;1.46e-16;39!CL:0000234;1.46e-16;39!CL:0000738;1.85e-16;136!CL:0000766;5.03e-16;69!CL:0000763;8.48e-16;100!CL:0000945;1.81e-14;24!CL:0000988;6.23e-14;177!CL:0000236;1.73e-12;13!CL:0000625;8.93e-12;11!CL:0000094;4.53e-08;8!CL:0000624;2.46e-07;6!CL:0000219;5.01e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.93e-95,168;CL:0002032,2.83e-89,161;CL:0000837,2.83e-89,161;CL:0000988,8.45e-88,177;CL:0000738,1.08e-79,136;CL:0002031,1.66e-67,120;CL:0002087,6.74e-67,115;CL:0000763,1.59e-48,108;CL:0000049,1.59e-48,108;CL:0000542,1.44e-35,53;CL:0000051,1.44e-35,53;CL:0000766,3.63e-35,72;CL:0000838,4.18e-35,52;CL:0000557,2.71e-30,67;CL:0000839,1.88e-29,66;CL:0000473,2.13e-28,48;CL:0000234,2.13e-28,48;CL:0002009,5.63e-28,61;CL:0002194,5.09e-27,59;CL:0000576,5.09e-27,59;CL:0000040,5.09e-27,59;CL:0000559,5.09e-27,59;CL:0000860,1.24e-26,42;CL:0002057,1.24e-26,42;CL:0000134,1.88e-22,354;CL:0002320,3.78e-21,361;CL:0000084,2.46e-19,25;CL:0000827,2.46e-19,25;CL:0000791,2.22e-18,18;CL:0000789,2.22e-18,18;CL:0002420,2.22e-18,18;CL:0002419,2.22e-18,18;CL:0000790,2.22e-18,18;CL:0000219,1.18e-16,386;CL:0000945,1.49e-14,24;CL:0000826,1.49e-14,24;CL:0000236,4.37e-13,14;CL:0000048,1.52e-12,427;CL:0000034,2.80e-12,441;CL:0000723,8.10e-12,433;CL:0000625,8.91e-12,11;CL:0002393,1.93e-08,9;CL:0002397,1.93e-08,9;CL:0000094,4.52e-08,8;CL:0000624,2.45e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000051;3.53e-21;53!CL:0002057;3.74e-19;42!CL:0000790;2.24e-18;18!CL:0000049;4.66e-14;108 | |||
|ontology_enrichment_disease=DOID:2531!8.95e-14!51;DOID:0060083!8.95e-14!51;DOID:1240!7.59e-11!39;DOID:8692!3.22e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.52e-09;39!DOID:8692;1.87e-09;31!DOID:2531;2.42e-09;51!DOID:0060083;2.42e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.48e-14,51;DOID:0060083,1.48e-14,51;DOID:1240,1.14e-12,39;DOID:8692,5.89e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.93e-30!102;UBERON:0003061!3.93e-30!102;UBERON:0002193!2.41e-26!112;UBERON:0002371!2.83e-20!80;UBERON:0001474!1.12e-17!86;UBERON:0004765!5.93e-15!101;UBERON:0001434!5.93e-15!101;UBERON:0002405!1.11e-14!115;UBERON:0002384!3.30e-12!375;UBERON:0007023!3.00e-09!115;UBERON:0000178!6.03e-07!15;UBERON:0000179!6.03e-07!15;UBERON:0000463!6.03e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.03e-09;15!UBERON:0000179;2.03e-09;15!UBERON:0000463;2.03e-09;15!UBERON:0002390;4.11e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.68e-39,98;UBERON:0003061,2.68e-39,98;UBERON:0002193,1.27e-35,108;UBERON:0002405,2.46e-27,93;UBERON:0002371,1.39e-25,76;UBERON:0001474,2.80e-22,82;UBERON:0002384,2.17e-19,371;UBERON:0004765,2.41e-19,90;UBERON:0001434,3.15e-16,100;UBERON:0000178,2.10e-09,15;UBERON:0000179,2.10e-09,15;UBERON:0000463,2.10e-09,15;UBERON:0003081,1.06e-08,203;UBERON:0004177,5.65e-07,7;UBERON:0005057,5.65e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01697543935533,0.602694528023977,0.730310090387373,1.95173119516203,0,0,0,0,0,0,1.91033514369878,2.46301768349837,2.67616656466509,22.4217637803875,15.3531759238885,12.5401059886022,0,0.30120591877825,0,6.58471204932564,5.54460006700944,9.39521405871511,8.30993112797816,6.21687787157439,6.51032612147556,16.3458296195145,12.9557466407592,11.3333249759042,43.4740733950898,21.5389287902621,34.6895207498577,5.81072592264212,3.28934310417461,4.02618282163635,3.16461631554365,4.09857130446561,4.25668013799453,4.48169384957604,5.16387746867061,6.77132432971709,12.4239944098119,5.18521685109907,9.21366286224847,5.50951006267625,5.1348644332175,6.39337125799041,10.5552416059749,6.58230070151385,9.80316926225197,1.7412554317715,2.8369261234557,2.4912889959823,4.77372463987812,2.08593167368081,5.86409880703815,1.81619850790011,2.94622108790052,5.06339819905415,30.8432718015435,27.0007460955605,18.0306435137203,17.4109378277067,17.8710502481393,13.8224004559489,51.8723193609072,49.3313359453743,45.8487025949231,54.55883578301,46.4217819572812,56.039082993404,64.4362636075426,70.4696937183382,60.3490061952207,52.2225449500041,53.4270102539804,19.3532409497212,12.9192181661607,16.4377488093848,18.5039860010636,15.1337312005015,8.95505888235262,28.326206896392,27.5107533924415,36.5970668219126,178.889550068026,170.783267716001,147.715715389237,144.171779021854,163.550550707435,220.365218791178,167.258090410634,261.86733626077,90.8167456855037,86.7495848224388,71.5304885025991,67.7057543575329,123.166311437397,79.9264575443506,82.1350342235419,70.0388009493344,97.5593440626045,59.7823970018997,69.0691165420086,81.9783802143189,75.818568609135,76.8278475550574,62.7298349335927,71.5231815619421,69.1127700233859,77.4570504624544,77.1893841663495,56.6578317875522,20.1606743224732,13.9068901807424,17.0892796581703,0,0,0,0,0,0,0.795285947051099,0.486634870302636,0,0,0,2.22664428346111,0,0,0.649094787309367,2.26368658489047,0.398873881556595,7.63169997777094,4.0039643754609,6.3147775226026,0.198762407366705,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0,36.8985168820977,31.022421131866,0,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,3.56400857184616,0.494533858557114,0,0,0.505008341862199,0.125118519871964,0,1.75591048352335,0,0.45071417671979,0,0.358779271377724,0,0,0,0.309157587715317,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0,1.93260853163297,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.18157981336281,4.41463099414651,0,0,0.548751427043128,0,0.603173834469785,0,0,1.03993478527958,0,0,0,0,0,0,0,0,12.0646332982825,0,2.97262324577457,0,0.16798212819886,1.27597587518148,0,0,0.383382679165211,0,11.5343448557326,5.80518723514162,5.18831832301061,6.56460653817176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,6.52934218861764,6.32501818449095,0,0,2.85273810081437,0.144781306667579,0,0.358121926479791,35.6430757899417,23.8407219844332,13.3689096412901,18.353054188004,0.254094624222463,0,0,0,0,23.2192177423627,38.8909896965232,33.5676565883189,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,25.2256991869923,25.0228472949596,20.7051462138682,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31555925987561,2.61435451024901,0,0,0,1.03041011647722,0,0,0.574265537996172,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0,0,0,0,0,2.01090682660736,0,0.564862804660675,0,0,0.443430153536676,0,78.1469318217541,91.756464857085,59.2433074661129,71.7077644127945,87.6201641673594,77.1683240319334,92.3453757677176,56.3118875168932,0,0,0,3.34445715226294,4.32807638929335,3.41480848072388,1.11598390910176,7.98317485731266,102.838383761081,42.5463901275005,25.3205113414153,30.606892414367,23.2799372613856,4.23035718587163,5.01268954180134,37.0748993385511,52.8334767091171,25.426763106072,2.98092366383228,2.74804275804612,0.614481528616916,3.57881772627865,0.500547425135725,11.7232857241224,0,0,4.8682022125677,9.32601510393896,1.4098700508785,0,0.879049075631364,0,9.8070178164181,0,0,0.296964680832639,0,0,0.281338832821026,0,1.6480387422676,0,0,12.4327761989016,0,0,2.58478091468246,0,0,0,19.951322438848,1.38100767891707,14.3689855408164,0,0,0.371072392647405,0,0,0,0,0.1137934482855,0,0,0,0,0,1.77148277162768,0.120596438625408,0,0.331737779793674,0,0,0,0,0.692552326534174,0,0,0,0,0,0.183195186803725,0,2.04386596391473,9.26183512730646,2.6593869104025,0,0,0,0,3.33766815858795,0,0,0,0,4.97630965539252,1.32686346755009,0,0,0,0,0.471807930864739,0.802577647298789,0.234264445725339,17.5156597647039,0,0,0.789168805698781,8.46935012340647,0.30607276163049,2.46427660551103,0,0,0,0,0,0,0,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| ||
|short_description=p3@CCM2 | |||
}} | }} |
Latest revision as of 18:39, 18 September 2015
Short description: | p3@CCM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CCM2_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000472223_5end |
EntrezGene: | CCM2 |
HGNC: | 21708 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.68e-39 | 98 |
blood island | 2.68e-39 | 98 |
hemolymphoid system | 1.27e-35 | 108 |
immune system | 2.46e-27 | 93 |
bone marrow | 1.39e-25 | 76 |
bone element | 2.80e-22 | 82 |
connective tissue | 2.17e-19 | 371 |
skeletal element | 2.41e-19 | 90 |
skeletal system | 3.15e-16 | 100 |
blood | 2.10e-09 | 15 |
haemolymphatic fluid | 2.10e-09 | 15 |
organism substance | 2.10e-09 | 15 |
lateral plate mesoderm | 1.06e-08 | 203 |
hemopoietic organ | 5.65e-07 | 7 |
immune organ | 5.65e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.48e-14 | 51 |
immune system cancer | 1.48e-14 | 51 |
leukemia | 1.14e-12 | 39 |
myeloid leukemia | 5.89e-10 | 31 |