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FFCP PHASE1:Mm9::chr2:24240651..24240687,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:24240651..24240687,+
|DHSsupport=NA
|short_description=p5@Psd4
|DPIdataset=NA
|description=CAGE_peak_5_at_Psd4_5end
|association_with_transcript=-164bp_to_ENSMUST00000056641_5end
|EntrezGene=215632
|EntrezGene=215632
|HGNC=
|HGNC=
|MCL_coexpression_id=122
|TSSclassifier=NA
|UniProt=Q8BLR5
|UniProt=Q8BLR5
|association_with_transcript=-164bp_to_ENSMUST00000056641_5end
|cluster_id=chr2:24240651..24240687,+
|description=CAGE_peak_5_at_Psd4_5end
|id=chr2:24240651..24240687,+
|ontology_enrichment_celltype=CL:0002031!7.25e-13!25;CL:0000838!1.29e-10!12;CL:0000738!4.22e-10!17;CL:0002087!4.22e-10!17;CL:0000084!9.28e-10!11;CL:0000827!9.28e-10!11;CL:0000988!1.62e-09!32;CL:0002032!1.62e-09!32;CL:0000037!1.62e-09!32;CL:0000566!1.62e-09!32;CL:0000837!1.62e-09!32;CL:0000542!2.14e-09!13;CL:0000051!2.14e-09!13;CL:0000791!5.92e-09!9;CL:0000789!5.92e-09!9;CL:0002420!5.92e-09!9;CL:0002419!5.92e-09!9;CL:0000790!5.92e-09!9;CL:0000624!4.30e-08!8;CL:0000063!6.09e-07!66
|ontology_enrichment_celltype_v019_2=CL:0002031,2.75e-21,25;CL:0000791,6.05e-17,9;CL:0000789,6.05e-17,9;CL:0002420,6.05e-17,9;CL:0002419,6.05e-17,9;CL:0000790,6.05e-17,9;CL:0000988,1.66e-15,32;CL:0002032,1.66e-15,32;CL:0000037,1.66e-15,32;CL:0000837,1.66e-15,32;CL:0000838,3.55e-15,12;CL:0000624,3.73e-15,8;CL:0000738,2.81e-14,17;CL:0002087,2.81e-14,17;CL:0000542,8.17e-14,13;CL:0000051,8.17e-14,13;CL:0000084,1.81e-13,11;CL:0000827,1.81e-13,11;CL:0000893,1.98e-11,6;CL:0002489,1.98e-11,6;CL:0000898,1.98e-11,6;CL:0000809,1.98e-11,6;CL:0000810,1.98e-11,6;CL:0000895,1.98e-11,6;CL:0000808,1.98e-11,6;CL:0000894,1.98e-11,6;CL:0000806,1.98e-11,6;CL:0000807,1.98e-11,6;CL:0000805,1.98e-11,6;CL:0002425,1.98e-11,6;CL:0002436,1.98e-11,6;CL:0002427,1.98e-11,6;CL:0002428,1.98e-11,6;CL:0002429,1.98e-11,6;CL:0002433,1.98e-11,6;CL:0002431,1.98e-11,6;CL:0002432,1.98e-11,6;CL:0000553,2.75e-11,6;CL:0000556,2.75e-11,6;CL:0002320,2.69e-09,46;CL:0000134,2.69e-09,46;CL:0000839,4.77e-08,13;CL:0000219,3.09e-07,54;CL:0000050,3.27e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!1.15e-16!48;UBERON:0002390!3.92e-15!45;UBERON:0003061!3.92e-15!45;UBERON:0004177!6.90e-12!29;UBERON:0004119!1.04e-10!130;UBERON:0000925!1.04e-10!130;UBERON:0006595!1.04e-10!130;UBERON:0001007!1.66e-10!128;UBERON:0001555!1.66e-10!128;UBERON:0007026!1.66e-10!128;UBERON:0004923!2.17e-10!24;UBERON:0002370!3.96e-10!23;UBERON:0000974!3.96e-10!23;UBERON:0004807!3.96e-10!23;UBERON:0005058!3.96e-10!23;UBERON:0003351!3.96e-10!23;UBERON:0009113!3.96e-10!23;UBERON:0003295!3.96e-10!23;UBERON:0009722!3.96e-10!23;UBERON:0005562!3.96e-10!23;UBERON:0007690!3.96e-10!23;UBERON:0004921!6.60e-10!126;UBERON:0004185!6.60e-10!126;UBERON:0002405!7.91e-10!70;UBERON:0006562!2.19e-09!24;UBERON:0003408!2.19e-09!24;UBERON:0001557!2.19e-09!24;UBERON:0001042!2.19e-09!24;UBERON:0008814!2.19e-09!24;UBERON:0009145!2.19e-09!24;UBERON:0000344!1.69e-08!15;UBERON:0005911!5.80e-08!69;UBERON:0001242!6.48e-08!13;UBERON:0000060!6.48e-08!13;UBERON:0001262!6.48e-08!13;UBERON:0004786!6.48e-08!13;UBERON:0000072!1.58e-07!27;UBERON:0000065!1.92e-07!41;UBERON:0003929!2.03e-07!55;UBERON:0001004!4.72e-07!42;UBERON:0003081!6.49e-07!88
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.11e-17,48;UBERON:0002405,1.11e-17,48;UBERON:0002390,2.32e-17,45;UBERON:0003061,2.32e-17,45;UBERON:0004177,5.23e-12,29;UBERON:0005057,5.23e-12,29;UBERON:0000077,1.35e-10,35;UBERON:0002370,3.02e-10,23;UBERON:0000974,3.02e-10,23;UBERON:0004807,3.02e-10,23;UBERON:0005058,3.02e-10,23;UBERON:0003351,3.02e-10,23;UBERON:0009113,3.02e-10,23;UBERON:0003295,3.02e-10,23;UBERON:0009722,3.02e-10,23;UBERON:0005562,3.02e-10,23;UBERON:0007690,3.02e-10,23;UBERON:0006562,1.09e-09,24;UBERON:0003408,1.09e-09,24;UBERON:0001557,1.09e-09,24;UBERON:0001042,1.09e-09,24;UBERON:0008814,1.09e-09,24;UBERON:0009145,1.09e-09,24;UBERON:0002384,2.69e-09,46;UBERON:0000072,2.84e-08,27;UBERON:0003081,1.67e-07,87;UBERON:0004119,4.27e-07,118;UBERON:0000925,4.27e-07,118;UBERON:0006595,4.27e-07,118;UBERON:0004921,6.56e-07,114
|phase1_expression=0,2.09385244583617,1.81999695755814,2.11724947914781,1.00179145989269,0.671517087647559,0.233612640595526,8.00564605337773,3.23814060948833,1.87251621057595,2.73948749160808,1.27635454392538,11.1280474455284,8.65461983948074,2.33176833270964,1.21485160433896,2.09868563438444,6.94016763788123,6.03303507865251,6.79023442876848,0.425216450755349,0.893618560807968,0.783599367416806,0.47997726838022,0.45881856213434,0,0.430761996159075,0.646413698057667,0.950117097281869,1.00812051903972,0.443461021310609,0,0,0,0.577703239502549,0.498703936075477,1.02084678131185,2.09265815368454,0,2.09409497589519,1.17646297606203,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0,0,0,6.37573903019398,9.42970784614748,6.72187598284928,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0.860423876981386,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.02765491747154,8.54495016035667,0.445326417194474,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0.741584903203122,0.289198713839823,0.884610551949874,0,0.441683036920787,0,0,0,0,1.78819938646014,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0.146199987425332,0,0,0,0.102904612379284,4.95628174475697,1.58670339998127,0,0,0,0.201683524623343,0.22237804384487,0.570676878337677,1.89811624617805,0.823494773620054,1.25667604400135,1.59165177632921,0.974820435595601,0,1.08069024937347,0.995706366271836,0,0,0,0,0,0,0.0632365371242573,0.295220295959204,0,0,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0,0.312037673114561,0,0,0,0.554259570499814,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0.8858587585951,0.318909537314974,0.81931657357869,1.03610989119537,1.44649058581512,3.01582567878545,1.08781136763742,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0,0,0,0.177340233642274,0,0,0,0,1.48282449604674,0.220528398054962,0.49465875882444,0,0.0603129249281559,0,0,0.582961673259701,0,2.56306321196779,0,0.185194527369712,0.565105371014073,1.77702496037333,1.60144721244566,0.509935289981566,1.25956307091292,0.690999869022119,0,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0.405450430580328,0.718976700153791,0.129920822977795,1.25318686967237,0.596044064343795,1.08175904567972,1.03382669022204,0.807731599585181,0.914481679859998,0.705783295957884,1.65678397257579,1.15454209968395,2.10378423926824,0,0,0,0,0.19318959403219,0.187682475451182,0.549454872801795,0.214368379079066,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.187283014939765,0,0.17230640686684,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0.441182838239031,0.231867835620421
|phase1_expression=0,2.09385244583617,1.81999695755814,2.11724947914781,1.00179145989269,0.671517087647559,0.233612640595526,8.00564605337773,3.23814060948833,1.87251621057595,2.73948749160808,1.27635454392538,11.1280474455284,8.65461983948074,2.33176833270964,1.21485160433896,2.09868563438444,6.94016763788123,6.03303507865251,6.79023442876848,0.425216450755349,0.893618560807968,0.783599367416806,0.47997726838022,0.45881856213434,0,0.430761996159075,0.646413698057667,0.950117097281869,1.00812051903972,0.443461021310609,0,0,0,0.577703239502549,0.498703936075477,1.02084678131185,2.09265815368454,0,2.09409497589519,1.17646297606203,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0,0,0,6.37573903019398,9.42970784614748,6.72187598284928,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0.860423876981386,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.02765491747154,8.54495016035667,0.445326417194474,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0.741584903203122,0.289198713839823,0.884610551949874,0,0.441683036920787,0,0,0,0,1.78819938646014,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0.146199987425332,0,0,0,0.102904612379284,4.95628174475697,1.58670339998127,0,0,0,0.201683524623343,0.22237804384487,0.570676878337677,1.89811624617805,0.823494773620054,1.25667604400135,1.59165177632921,0.974820435595601,0,1.08069024937347,0.995706366271836,0,0,0,0,0,0,0.0632365371242573,0.295220295959204,0,0,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0,0.312037673114561,0,0,0,0.554259570499814,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0.8858587585951,0.318909537314974,0.81931657357869,1.03610989119537,1.44649058581512,3.01582567878545,1.08781136763742,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0,0,0,0.177340233642274,0,0,0,0,1.48282449604674,0.220528398054962,0.49465875882444,0,0.0603129249281559,0,0,0.582961673259701,0,2.56306321196779,0,0.185194527369712,0.565105371014073,1.77702496037333,1.60144721244566,0.509935289981566,1.25956307091292,0.690999869022119,0,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0.405450430580328,0.718976700153791,0.129920822977795,1.25318686967237,0.596044064343795,1.08175904567972,1.03382669022204,0.807731599585181,0.914481679859998,0.705783295957884,1.65678397257579,1.15454209968395,2.10378423926824,0,0,0,0,0.19318959403219,0.187682475451182,0.549454872801795,0.214368379079066,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.187283014939765,0,0.17230640686684,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0.441182838239031,0.231867835620421
|short_description=p5@Psd4
}}
}}

Latest revision as of 09:38, 26 September 2015

Short description:p5@Psd4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Psd4_5end
Coexpression cluster:MCL_coexpression_mm9:122
Association with transcript: -164bp_to_ENSMUST00000056641_5end
EntrezGene:Psd4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Psd4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E98.01
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.74
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.28
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E411.13
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E88.65
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.94
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.03
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.79
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.38
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I99.43
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.72
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H98.54
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I34.96
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G22.56
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H11.78
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.91
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A21.66
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G22.10
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hematopoietic lineage restricted progenitor cell2.75e-2125
mature alpha-beta T cell6.05e-179
alpha-beta T cell6.05e-179
immature T cell6.05e-179
mature T cell6.05e-179
immature alpha-beta T cell6.05e-179
hematopoietic cell1.66e-1532
hematopoietic oligopotent progenitor cell1.66e-1532
hematopoietic stem cell1.66e-1532
hematopoietic multipotent progenitor cell1.66e-1532
lymphoid lineage restricted progenitor cell3.55e-1512
CD4-positive, alpha-beta T cell3.73e-158
leukocyte2.81e-1417
nongranular leukocyte2.81e-1417
lymphocyte8.17e-1413
common lymphoid progenitor8.17e-1413
T cell1.81e-1311
pro-T cell1.81e-1311
thymocyte1.98e-116
double negative thymocyte1.98e-116
naive T cell1.98e-116
double-positive, alpha-beta thymocyte1.98e-116
CD4-positive, alpha-beta thymocyte1.98e-116
naive thymus-derived CD4-positive, alpha-beta T cell1.98e-116
DN4 thymocyte1.98e-116
DN1 thymic pro-T cell1.98e-116
DN2 thymocyte1.98e-116
DN3 thymocyte1.98e-116
immature single positive thymocyte1.98e-116
early T lineage precursor1.98e-116
mature CD4 single-positive thymocyte1.98e-116
resting double-positive thymocyte1.98e-116
double-positive blast1.98e-116
CD69-positive double-positive thymocyte1.98e-116
CD69-positive, CD4-positive single-positive thymocyte1.98e-116
CD4-positive, CD8-intermediate double-positive thymocyte1.98e-116
CD24-positive, CD4 single-positive thymocyte1.98e-116
megakaryocyte progenitor cell2.75e-116
megakaryocyte2.75e-116
connective tissue cell2.69e-0946
mesenchymal cell2.69e-0946
myeloid lineage restricted progenitor cell4.77e-0813
motile cell3.09e-0754
megakaryocyte-erythroid progenitor cell3.27e-079

Uber anatomy
Ontology termp-valuen
hemolymphoid system1.11e-1748
immune system1.11e-1748
hematopoietic system2.32e-1745
blood island2.32e-1745
hemopoietic organ5.23e-1229
immune organ5.23e-1229
mixed endoderm/mesoderm-derived structure1.35e-1035
thymus3.02e-1023
neck3.02e-1023
respiratory system epithelium3.02e-1023
hemolymphoid system gland3.02e-1023
pharyngeal epithelium3.02e-1023
thymic region3.02e-1023
pharyngeal gland3.02e-1023
entire pharyngeal arch endoderm3.02e-1023
thymus primordium3.02e-1023
early pharyngeal endoderm3.02e-1023
pharynx1.09e-0924
gland of gut1.09e-0924
upper respiratory tract1.09e-0924
chordate pharynx1.09e-0924
pharyngeal arch system1.09e-0924
pharyngeal region of foregut1.09e-0924
connective tissue2.69e-0946
segment of respiratory tract2.84e-0827
lateral plate mesoderm1.67e-0787
endoderm-derived structure4.27e-07118
endoderm4.27e-07118
presumptive endoderm4.27e-07118
subdivision of digestive tract6.56e-07114
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