FFCP PHASE1:Mm9::chr6:113433578..113433612,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr6:113433578..113433612,+ to FFCP PHASE1:Mm9::chr6:113433578..113433612,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=171508 | |EntrezGene=171508 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=128 | |||
|TSSclassifier=NA | |||
|UniProt=A8C1T7,Q91XD7 | |UniProt=A8C1T7,Q91XD7 | ||
|association_with_transcript=15bp_to_NM_133930,uc009dgn.1,uc009dgo.1_5end | |||
|cluster_id=chr6:113433578..113433612,+ | |||
|description=CAGE_peak_3_at_Creld1_5end | |||
|id=chr6:113433578..113433612,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.59e-10!50;CL:0002319!2.46e-08!43;CL:0000221!2.65e-08!44;CL:0000133!2.65e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.61e-08,43;CL:0000221,2.80e-08,44;CL:0000133,2.80e-08,44;CL:0002321,6.11e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!1.97e-17!114;UBERON:0004111!3.13e-17!122;UBERON:0000073!1.08e-16!75;UBERON:0001016!1.08e-16!75;UBERON:0001017!3.37e-16!73;UBERON:0005743!3.37e-16!73;UBERON:0004121!9.82e-13!102;UBERON:0000924!9.82e-13!102;UBERON:0006601!9.82e-13!102;UBERON:0000955!1.40e-10!50;UBERON:0006238!1.40e-10!50;UBERON:0001049!4.23e-10!52;UBERON:0005068!4.23e-10!52;UBERON:0006241!4.23e-10!52;UBERON:0007135!4.23e-10!52;UBERON:0002616!4.39e-10!49;UBERON:0002346!1.09e-08!71;UBERON:0003075!1.09e-08!71;UBERON:0007284!1.09e-08!71;UBERON:0000033!1.38e-08!63;UBERON:0003914!5.67e-08!47;UBERON:0003080!8.87e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,3.67e-17,114;UBERON:0001016,6.67e-17,75;UBERON:0004111,7.35e-17,122;UBERON:0001017,2.15e-16,73;UBERON:0004121,1.66e-13,95;UBERON:0000924,1.66e-13,95;UBERON:0006601,1.66e-13,95;UBERON:0010314,1.75e-12,92;UBERON:0000073,1.83e-11,54;UBERON:0001049,3.02e-10,52;UBERON:0005068,3.02e-10,52;UBERON:0006241,3.02e-10,52;UBERON:0007135,3.02e-10,52;UBERON:0002346,9.11e-10,64;UBERON:0003075,9.11e-10,64;UBERON:0007284,9.11e-10,64;UBERON:0000955,3.44e-09,47;UBERON:0006238,3.44e-09,47;UBERON:0010371,4.78e-09,73;UBERON:0002616,1.05e-08,46;UBERON:0003914,8.56e-08,47;UBERON:0003080,7.86e-07,40 | |||
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|phase1_expression=1.76163731815273,0,0,0,0.500895729946347,0.33575854382378,0.467225281191051,0.129123323441576,1.83025338797167,2.57470978954193,0.513653904676515,0.478632953972018,0,0.0874204024189974,0.333109761815663,0.607425802169478,0,0.157731082679119,0,0.42438965179803,2.89147186513637,0.198581902401771,0,0.159992422793407,0,0,0,0.430942465371778,0,0,0,6.35030673459631,7.99584223859941,0,0,0.166234645358492,0.408338712524738,0,0,0.523523743973798,0,0,0,3.52511090331616,3.75094645512204,2.0190142737785,7.04152209913235,10.9012578190223,25.2639110144643,16.5265414213141,4.4795654920116,4.31257693094915,0.335565212115473,0.725362142011344,0,8.48956138918625,5.44413535883638,5.67239301505187,1.01158230429799,3.1739458756322,0.633831403506179,5.42151251310611,2.66788438833342,3.5995988691256,6.92206453796882,9.9467216092454,11.085204089181,12.2949857702897,0.725827286159344,1.75507719831198,1.26194976810829,4.57041575046086,4.8591079009355,1.22490799214954,1.34183659425531,2.75765635983006,13.2139057199266,7.2781782708557,9.5236050618871,1.45074916503213,1.73826522844578,1.56274011167028,6.42120897703176,6.19038871034848,5.95913166329559,4.71405736757868,6.40672563595963,2.05039390407831,2.49896437999507,6.72586884950391,4.34796733052517,18.0689014166091,10.1995700056163,52.3512095888683,49.3830077260229,27.7776670000348,8.98844288843212,0,0,0,2.39433813620357,0,0,0,6.92771331235885,7.09407623330276,3.0331466700887,5.1382745873577,1.8125651855302,2.3750742250372,1.56136794089522,1.82679286987285,2.53677046981664,0.452167921657868,0.823120949949934,2.89033160058254,0.247194967734374,11.7125479105128,0,1.7794353494215,1.98757366614354,0.969750506270444,1.86391761218122,2.63502717310392,5.86450779077674,0.510914110417183,0.958520996047362,0,0.889491589511453,5.09288173976397,10.5225138648284,2.26177833803156,7.47444576826789,6.39288643325826,10.389402227978,7.13861557498134,0.81471491080253,1.8661045591514,3.28539585963777,1.26265113531884,2.34216797332867,2.06911893990126,3.24111833649629,1.05493372485001,1.02054748726992,1.2811372028485,1.59292931751539,2.84573707812917,0.431135985865684,1.51284864134255,0.703804496655795,2.6303487891309,3.05851974148158,2.089512999133,2.88094990971121,1.19420560091096,0.702213187313235,0.51469581422943,1.70498099637356,6.62802472113606,2.81431271977315,3.96136535214233,4.97163944728941,3.34499193970586,5.707883176833,3.0229412817553,5.633741429392,2.21854150497622,2.79751744852917,2.46251196118643,2.51313309592153,2.92399974850665,3.73235195994786,4.2946054003319,9.88362758251398,1.23485534855141,0.330418782983798,0,2.55945900642281,0.928946687441754,1.15980715189884,1.21010114774006,0.889512175379481,0.570676878337677,0.474529061544512,0.988193728344065,0.251335208800269,0.198956472041151,0.58489226135736,0.898819408654221,0.432276099749388,0.398282546508734,2.46568271239006,1.5994791765362,0,1.83286195060783,1.93952487167626,1.1221731182451,1.3279672796094,0.442830443938806,2.19798218977925,2.59134044235781,9.19003143970162,1.66845105716094,0.786235980452812,0.674586337154561,1.21716072833102,1.4470629585145,1.52775511068852,1.43848068725405,4.05338066937588,1.92192989231657,5.75072826109418,2.97712758134803,3.43241440426017,6.06189307073068,10.4050499842709,8.20153986317724,2.03228509183265,2.65287976478679,2.44447464663039,2.37643120085263,1.87752198630802,3.35012514883632,0.952174563544055,0.390267295715598,1.26108115284953,1.7717175171902,1.43509291791738,2.62181303545181,2.41758974612254,2.31438493730419,7.53956419696361,5.98296252200581,1.47529281905711,3.31124095565679,5.13761887960934,3.98519734413491,0,6.5642441073137,4.10160685241134,5.0757036758563,4.73931475012158,5.01834475700359,6.46116154838943,4.52922449262132,5.66734982344852,7.89090816360542,4.74345333535828,8.67567554338879,2.12910127812403,2.13678724400706,1.30309567482861,2.47455184458803,0,0.971122544619926,0.906970670894253,1.32023555829129,2.36241514304618,0.614870295887855,0.775284879504663,0.727067458955011,1.78248689192361,0.316036757935816,0,0,3.74483566329167,2.34079422240703,3.88076051348264,3.64372959553707,2.12808280370728,1.60531935841864,2.13913726782757,3.04464949114599,6.33613611772018,2.75381692122966,2.8668691747145,3.95727007059552,0.968786560175433,2.5934557719107,1.67121281604391,1.31312719796049,0.874442509889552,5.37733375830478,1.53783792718067,1.23832120777933,0.370389054739423,0.376736914009382,0.546776910884101,0.228778173206523,0.849892149969277,0.279902904647316,0.967399816630967,2.86401185404534,2.53068794864908,1.62655573701479,1.62008011232702,1.46361807210128,1.52853794622324,2.56242258131159,1.40510874733071,1.57053565190418,0.90730481304255,0.621339313086926,0,1.64468200648377,0.992750942742586,1.36115831840833,1.54991788173277,1.35164900392623,0.938857909166032,1.17183946359555,1.25831213310853,0,0.576060012515731,0,1.01362607645082,0.924398614483445,0.25984164595559,0.358053391334963,0.39736270956253,0.120195449519969,0.295379054349154,0.302899349844443,0.381034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| ||
|short_description=p3@Creld1 | |||
}} | }} |
Latest revision as of 11:32, 26 September 2015
Short description: | p3@Creld1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Creld1_5end |
Coexpression cluster: | MCL_coexpression_mm9:128 |
Association with transcript: | 15bp_to_NM_133930, uc009dgn.1, uc009dgo.1_5end |
EntrezGene: | Creld1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.61e-08 | 43 |
ectodermal cell | 2.80e-08 | 44 |
neurectodermal cell | 2.80e-08 | 44 |
embryonic cell | 6.11e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
tube | 3.67e-17 | 114 |
nervous system | 6.67e-17 | 75 |
anatomical conduit | 7.35e-17 | 122 |
central nervous system | 2.15e-16 | 73 |
ectoderm-derived structure | 1.66e-13 | 95 |
ectoderm | 1.66e-13 | 95 |
presumptive ectoderm | 1.66e-13 | 95 |
structure with developmental contribution from neural crest | 1.75e-12 | 92 |
regional part of nervous system | 1.83e-11 | 54 |
neural tube | 3.02e-10 | 52 |
neural rod | 3.02e-10 | 52 |
future spinal cord | 3.02e-10 | 52 |
neural keel | 3.02e-10 | 52 |
neurectoderm | 9.11e-10 | 64 |
neural plate | 9.11e-10 | 64 |
presumptive neural plate | 9.11e-10 | 64 |
brain | 3.44e-09 | 47 |
future brain | 3.44e-09 | 47 |
ecto-epithelium | 4.78e-09 | 73 |
regional part of brain | 1.05e-08 | 46 |
epithelial tube | 8.56e-08 | 47 |
anterior neural tube | 7.86e-07 | 40 |