FFCP PHASE1:Mm9::chr6:23198538..23198548,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr6:23198538..23198548,+ to FFCP PHASE1:Mm9::chr6:23198538..23198548,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1824 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:23198538..23198548,+ | |||
|description=CAGE_peak_at_chr6:23198538..23198548,+ | |||
|id=chr6:23198538..23198548,+ | |||
|ontology_enrichment_celltype=CL:0002613!1.10e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,4.90e-53,3;CL:0000117,1.12e-07,23;CL:0000337,1.12e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001894!9.72e-08!10;UBERON:0006222!9.72e-08!10;UBERON:0000007!3.75e-07!8;UBERON:0003296!3.75e-07!8;UBERON:0010133!3.75e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,2.89e-32,5;UBERON:0002435,2.89e-32,5;UBERON:0000204,2.89e-32,5;UBERON:0010082,2.89e-32,5;UBERON:0002420,1.53e-20,8;UBERON:0007245,1.53e-20,8;UBERON:0010009,1.53e-20,8;UBERON:0010011,1.53e-20,8;UBERON:0000454,1.53e-20,8;UBERON:0002780,8.52e-12,39;UBERON:0001890,8.52e-12,39;UBERON:0006240,8.52e-12,39;UBERON:0003080,1.62e-11,40;UBERON:0002616,4.29e-10,46;UBERON:0000955,6.83e-10,47;UBERON:0006238,6.83e-10,47;UBERON:0000007,1.32e-09,8;UBERON:0003296,1.32e-09,8;UBERON:0010133,1.32e-09,8;UBERON:0003056,1.64e-09,49;UBERON:0001049,5.37e-09,52;UBERON:0005068,5.37e-09,52;UBERON:0006241,5.37e-09,52;UBERON:0007135,5.37e-09,52;UBERON:0000073,1.10e-08,54;UBERON:0001894,7.02e-08,10;UBERON:0006222,7.02e-08,10;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,2.2420668914133,2.37867873366265,3.12548022334056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0.30140963567143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,1.81102157295856,1.28602221018955,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.830298780673413,0.798049746802062,0.853668028770671,0.729320151204882,0.209613162627982,0.183843508450014,0.44449345560323,0.412070114477788,0,0,0.25347929989024,0,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0.476872379894642,0.145346416632329,0.188218760830661,0.0846146078916765,0.365855945745545,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0.499621155875892,0.233931608445408,0.429742108096597,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,2.2420668914133,2.37867873366265,3.12548022334056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0.30140963567143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,1.81102157295856,1.28602221018955,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.830298780673413,0.798049746802062,0.853668028770671,0.729320151204882,0.209613162627982,0.183843508450014,0.44449345560323,0.412070114477788,0,0,0.25347929989024,0,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0.476872379894642,0.145346416632329,0.188218760830661,0.0846146078916765,0.365855945745545,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0.499621155875892,0.233931608445408,0.429742108096597,0,0,0 | ||
|short_description=p@chr6:23198538..23198548,+ | |||
}} | }} |
Latest revision as of 12:05, 5 August 2015
Short description: | p@chr6:23198538..23198548, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:23198538..23198548, + |
Coexpression cluster: | MCL_coexpression_mm9:1824 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 4.90e-53 | 3 |
CNS neuron (sensu Vertebrata) | 1.12e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.12e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 2.89e-32 | 5 |
striatum | 2.89e-32 | 5 |
ventral part of telencephalon | 2.89e-32 | 5 |
future corpus striatum | 2.89e-32 | 5 |
basal ganglion | 1.53e-20 | 8 |
nuclear complex of neuraxis | 1.53e-20 | 8 |
aggregate regional part of brain | 1.53e-20 | 8 |
collection of basal ganglia | 1.53e-20 | 8 |
cerebral subcortex | 1.53e-20 | 8 |
regional part of forebrain | 8.52e-12 | 39 |
forebrain | 8.52e-12 | 39 |
future forebrain | 8.52e-12 | 39 |
anterior neural tube | 1.62e-11 | 40 |
regional part of brain | 4.29e-10 | 46 |
brain | 6.83e-10 | 47 |
future brain | 6.83e-10 | 47 |
pituitary gland | 1.32e-09 | 8 |
gland of diencephalon | 1.32e-09 | 8 |
neuroendocrine gland | 1.32e-09 | 8 |
pre-chordal neural plate | 1.64e-09 | 49 |
neural tube | 5.37e-09 | 52 |
neural rod | 5.37e-09 | 52 |
future spinal cord | 5.37e-09 | 52 |
neural keel | 5.37e-09 | 52 |
regional part of nervous system | 1.10e-08 | 54 |
diencephalon | 7.02e-08 | 10 |
future diencephalon | 7.02e-08 | 10 |
neurectoderm | 2.08e-07 | 64 |
neural plate | 2.08e-07 | 64 |
presumptive neural plate | 2.08e-07 | 64 |