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{{f5samples
{{f5samples
|id=FF:10838-111E1
|DRA_sample_Accession=CAGE@SAMD00004791
|name=medulloblastoma cell line:D283 Med
|DRA_sample_Accession_RNASeq=RNA-Seq@SAMD00004791
|sample_id=10838
|accession_numbers=CAGE;DRX007928;DRR008800;DRZ000225;DRZ001610;DRZ011575;DRZ012960
|rna_tube_id=111E1
|accession_numbers_RNASeq=RNA-Seq;DRX057146;DRR062905;DRZ007981
|rna_box=111
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000955,UBERON:0004121,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0010317,UBERON:0001017,UBERON:0001016
|rna_position=E1
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002371,CL:0002319,CL:0000095,CL:0000243,CL:0000125,CL:0000255
|sample_cell_lot=
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:3093
|sample_cell_catalog=HTB185
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100711,FF:0100255,FF:0100690,FF:0101531,FF:0101359
|sample_company=ATCC
|comment=
|rna_lot_number=
|created_by=
|rna_catalog_number=
|creation_date=
|sample_species=Human (Homo sapiens)
|data_phase=2
|sample_strain=
|datafreeze_phase=2
|sample_dev_stage=
|def=
|sample_tissue=brain
|expression_enrichment_score=chr14:57277178..57277203,-!p1@OTX2!2.82!663.24!OTX2;;chr5:134871645..134871660,-!p1@NEUROG1!2.51!320.69!NEUROG1;;chr19:48325184..48325211,+!p1@CRX!2.37!232.98!CRX;;chr14:57272369..57272391,-!p2@OTX2!2.33!214.03!OTX2;;chr2:162272889..162272915,+!p2@TBR1!2.27!186.63!TBR1;;chr2:162272785..162272836,+!p1@TBR1!2.27!183.73!TBR1;;chr14:29235961..29236008,+!p1@FOXG1!2.26!179.99!FOXG1;;chr2:239148671..239148686,-!p1@HES6!2.23!592.13!HES6;;chr2:182545234..182545252,-!p1@NEUROD1!2.18!151.49!NEUROD1;;chr13:72441315..72441454,-!p1@DACH1!1.92!159.24!DACH1;;chr14:57277098..57277116,-!p3@OTX2!1.90!78.03!OTX2;;chr8:10588010..10588030,-!p1@SOX7!1.87!72.36!SOX7;;chr1:75602043..75602093,+!p1@LHX8!1.85!69.17!LHX8;;chr3:52001448..52001478,-!p2@PCBP4!1.82!841.85!PCBP4;;chr9:14314131..14314147,-!p2@NFIB!1.68!249.17!NFIB;;chr22:19748231..19748317,+!p1@TBX1!1.68!46.90!TBX1;;chr1:164528687..164528711,+!p6@PBX1!1.67!52.57!PBX1;;chr1:44513995..44514031,+!p1@KLF17!1.67!46.07!KLF17;;chr14:29236269..29236285,+!p3@FOXG1!1.67!45.79!FOXG1;;chr8:128748308..128748324,+!p2@MYC!1.58!963.04!MYC;;chr14:29237009..29237049,+!p4@FOXG1!1.58!37.22!FOXG1;;chr2:162272716..162272753,+!p3@TBR1!1.58!36.80!TBR1;;chr8:106330656..106330684,+!p1@ZFPM2!1.53!83.84!ZFPM2;;chr13:72441074..72441172,-!p2@DACH1!1.52!32.24!DACH1;;chr19:46800289..46800327,+!p2@HIF3A!1.52!31.82!HIF3A;;chr11:63684602..63684664,-!p1@RCOR2!1.48!56.45!RCOR2;;chr3:147127142..147127168,+!p1@ZIC1!1.44!26.84!ZIC1;;chr12:125003087..125003141,-!p4@NCOR2!1.42!32.51!NCOR2;;chr9:14314106..14314119,-!p5@NFIB!1.40!42.47!NFIB;;chr18:55102598..55102623,+!p1@ONECUT2!1.39!23.66!ONECUT2;;chr2:5832508..5832524,+!p1@SOX11!1.38!23.24!SOX11;;chr15:76629123..76629151,+!p1@ISL2!1.37!24.76!ISL2;;chr18:55102628..55102646,+!p2@ONECUT2!1.36!22.00!ONECUT2;;chr12:54447637..54447659,+!p4@HOXC4!1.36!21.72!HOXC4;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.35!21.44!PEG3;;chr12:54447599..54447630,+!p3@HOXC4!1.34!25.32!HOXC4;;chr9:14313893..14313908,-!p7@NFIB!1.33!29.33!NFIB;;chr8:40755333..40755352,-!p1@ZMAT4!1.33!20.20!ZMAT4;;chrY:21906594..21906622,-!p1@KDM5D!1.32!20.06!KDM5D;;chr13:37494365..37494381,-!p1@SMAD9!1.31!33.20!SMAD9;;chr3:52002194..52002250,-!p5@PCBP4!1.29!18.68!PCBP4;;chr1:221052840..221052875,+!p4@HLX!1.28!21.58!HLX;;chr14:29234581..29234601,+!p2@FOXG1!1.28!18.26!FOXG1;;chr14:57277163..57277168,-!p4@OTX2!1.26!17.16!OTX2;;chr19:47523058..47523114,+!p1@NPAS1!1.26!17.02!NPAS1;;chr20:20348740..20348757,+!p1@INSM1!1.25!16.60!INSM1;;chr14:24553835..24553850,-!p1@NRL!1.25!16.60!NRL;;chr9:14314566..14314618,-!p1@NFIB!1.24!190.09!NFIB;;chr19:50432453..50432468,+!p1@ATF5!1.23!876.85!ATF5;;chr20:51588873..51588953,+!p1@TSHZ2!1.23!21.03!TSHZ2;;chr1:221052733..221052749,+!p2@HLX!1.23!20.89!HLX;;chr17:37764128..37764258,-!p1@NEUROD2!1.23!15.91!NEUROD2;;chr11:125034640..125034655,+!p1@PKNOX2!1.22!15.50!PKNOX2;;chr8:86089417..86089440,+!p2@E2F5!1.19!28.78!E2F5;;chr19:22817119..22817145,+!p1@ZNF492!1.19!23.93!ZNF492;;chr8:80679993..80680011,-!p1@HEY1!1.18!20.61!HEY1;;chr2:25475120..25475176,-!p2@DNMT3A!1.18!18.95!DNMT3A;;chr9:14307229..14307286,-!p10@NFIB!1.18!15.77!NFIB;;chr9:20621927..20621996,-!p3@MLLT3!1.17!23.24!MLLT3;;chr3:147127177..147127194,+!p2@ZIC1!1.16!13.42!ZIC1;;chr12:66218183..66218209,+!p4@HMGA2!1.15!25.04!HMGA2;;chr3:25469724..25469773,+!p1@RARB!1.15!18.82!RARB;;chr11:8102846..8102892,+!p1@TUB!1.15!18.40!TUB;;chr8:106330696..106330719,+!p2@ZFPM2!1.15!16.88!ZFPM2;;chr8:81398444..81398472,+!p1@ZBTB10!1.14!51.88!ZBTB10;;chr3:25470156..25470227,+!p2@RARB!1.14!12.73!RARB;;chr3:52001426..52001447,-!p3@PCBP4!1.12!34.73!PCBP4;;chr9:14314066..14314075,-!p11@NFIB!1.12!12.31!NFIB;;chr9:3525910..3525955,-!p4@RFX3!1.11!35.97!RFX3;;chr17:53342311..53342400,+!p1@HLF!1.09!13.14!HLF;;chr11:125034605..125034636,+!p2@PKNOX2!1.09!11.21!PKNOX2;;chr1:247171347..247171366,-!p2@ZNF695!1.07!19.78!ZNF695;;chr1:23857325..23857416,-!p2@E2F2!1.07!12.45!E2F2;;chr16:51185318..51185348,-!p2@SALL1!1.07!10.79!SALL1;;chr13:37494306..37494324,-!p4@SMAD9!1.07!10.65!SMAD9;;chr14:21562671..21562702,-!p8@ZNF219!1.06!10.38!ZNF219;;chr14:29236301..29236317,+!p5@FOXG1!1.06!10.38!FOXG1;;chr3:44626446..44626477,+!p1@ZNF660!1.04!17.85!ZNF660;;chr9:14082760..14082775,-!p6@NFIB!1.04!16.60!NFIB;;chr1:41827095..41827155,+!p1@FOXO6!1.04!13.70!FOXO6;;chr9:3525867..3525902,-!p3@RFX3!1.02!33.20!RFX3;;chr12:66218255..66218304,+!p3@HMGA2!1.02!25.73!HMGA2;;chrX:84499081..84499115,+!p2@ZNF711!1.02!13.97!ZNF711;;chr17:42295777..42295816,-!p7@UBTF!1.02!11.48!UBTF;;chr5:134369905..134369972,-!p1@PITX1!1.01!14.25!PITX1;;chr2:239149300..239149321,-!p2@HES6!1.01!9.27!HES6;;chr2:45236540..45236577,-!p1@SIX2!1.01!9.27!SIX2;;chr9:14083467..14083483,-!p4@NFIB!1.00!22.41!NFIB;;chr8:128750654..128750793,+!p3@MYC!0.99!35.83!MYC;;chr12:66218152..66218174,+!p10@HMGA2!0.99!9.55!HMGA2;;chr14:21566540..21566580,-!p2@ZNF219!0.98!11.76!ZNF219;;chr10:70320074..70320106,+!p1@TET1!0.97!17.16!TET1;;chr11:71955210..71955227,-!p1@PHOX2A!0.97!8.44!PHOX2A;;chr14:36003363..36003378,+!p1@INSM2!0.97!8.44!INSM2;;chr9:14308004..14308041,-!p14@NFIB!0.96!8.16!NFIB;;chr1:10856665..10856683,-!p4@CASZ1!0.96!8.16!CASZ1;;chr12:85673977..85674015,+!p1@ALX1!0.96!8.02!ALX1;;chr14:29236169..29236216,+!p6@FOXG1!0.96!8.02!FOXG1;;chr19:12163769..12163798,-!p1@ZNF878!0.95!10.38!ZNF878;;chr1:164528975..164528998,+!p13@PBX1!0.95!7.89!PBX1;;chr1:165414325..165414369,-!p1@RXRG!0.95!7.89!RXRG;;chr1:59249645..59249656,-!p4@JUN!0.94!19.92!JUN;;chr5:138609782..138609826,+!p5@MATR3!0.93!50.22!MATR3;;chr9:3525968..3526016,-!p1@RFX3!0.93!44.82!RFX3;;chr1:3569072..3569093,+!p1@TP73!0.93!7.61!TP73;;chr9:77112225..77112238,+!p2@RORB!0.93!7.47!RORB;;chr15:96874012..96874042,+!p2@NR2F2!0.92!68.34!NR2F2;;chr14:73360799..73360817,-!p1@DPF3!0.92!26.56!DPF3;;chr1:221052776..221052799,+!p1@HLX!0.92!13.42!HLX;;chr8:128752771..128752843,+!p9@MYC!0.92!10.65!MYC;;chr1:214161272..214161322,+!p1@PROX1!0.92!10.38!PROX1;;chr12:54447686..54447704,+!p5@HOXC4!0.92!7.33!HOXC4;;chr5:176738887..176738934,-!p1@MXD3!0.91!49.25!MXD3;;chr19:23433144..23433204,-!p1@ZNF724P!0.91!33.48!ZNF724P;;chr6:20402102..20402152,+!p1@E2F3!0.91!30.85!E2F3;;chr1:151032922..151032951,+!p2@MLLT11!0.91!12.04!MLLT11;;chr12:66218212..66218244,+!p5@HMGA2!0.91!10.65!HMGA2;;chr3:40547564..40547616,+!p1@ZNF620!0.91!10.24!ZNF620;;chr1:10856694..10856715,-!p3@CASZ1!0.91!7.19!CASZ1;;chr11:8040739..8040815,+!p4@TUB!0.91!7.06!TUB;;chr1:23857698..23857733,-!p1@E2F2!0.90!13.00!E2F2;;chr9:14314522..14314556,-!p3@NFIB!0.89!16.33!NFIB;;chr12:66218378..66218401,+!p6@HMGA2!0.89!10.65!HMGA2;;chr1:247171316..247171336,-!p3@ZNF695!0.89!10.38!ZNF695;;chr2:166326200..166326216,+!p1@CSRNP3!0.89!10.24!CSRNP3;;chr17:79881332..79881348,-!p3@MAFG!0.89!10.10!MAFG;;chr19:11750566..11750627,+!p1@ZNF833P!0.89!9.27!ZNF833P;;chr8:10588174..10588200,-!p3@SOX7!0.89!6.78!SOX7;;chr8:86089369..86089408,+!p1@E2F5!0.88!18.54!E2F5;;chr8:124286670..124286702,-!p3@ZHX1!0.88!11.76!ZHX1;;chr2:85981222..85981259,+!p2@ATOH8!0.88!11.07!ATOH8;;chr20:51589133..51589159,+!p2@TSHZ2!0.88!6.64!TSHZ2;;chr13:37494275..37494304,-!p2@SMAD9!0.88!6.50!SMAD9;;chr19:19729477..19729542,-!p1@PBX4!0.87!14.25!PBX4;;chr21:34144157..34144175,-!p3@GCFC1!0.87!10.65!GCFC1;;chr3:148804275..148804346,-!p1@HLTF!0.86!217.35!HLTF;;chr1:153940354..153940395,+!p1@CREB3L4!0.86!26.42!CREB3L4;;chr9:86594530..86594564,-!p@chr9:86594530..86594564,-!0.86!25.32!HNRPK;;chr7:27196267..27196311,-!p1@HOXA7!0.86!6.23!HOXA7;;chr7:35293685..35293718,-!p1@TBX20!0.86!6.23!TBX20;;chr19:9695169..9695188,-!p1@ZNF121!0.85!113.86!ZNF121;;chr20:45142154..45142227,-!p1@ZNF334!0.85!12.45!ZNF334;;chrX:84498989..84499003,+!p1@ZNF711!0.85!8.58!ZNF711;;chr3:126076242..126076257,-!p1@KLF15!0.85!7.75!KLF15;;chr8:128752850..128752874,+!p12@MYC!0.85!7.47!MYC;;chr1:38512457..38512474,-!p1@POU3F1!0.85!6.64!POU3F1;;chr19:47538560..47538591,+!p2@NPAS1!0.85!6.09!NPAS1;;chr1:75600318..75600329,+!p4@LHX8!0.85!6.09!LHX8;;chr10:70320041..70320065,+!p2@TET1!0.85!6.09!TET1;;chr22:42739839..42739867,-!p1@ENST00000515426!0.85!6.09!TCF20;;chr20:306177..306211,+!p2@SOX12!0.84!43.03!SOX12;;chr6:1389789..1389821,+!p1@FOXF2!0.84!8.30!FOXF2;;chr12:125003069..125003080,-!p20@NCOR2!0.84!5.95!NCOR2;;chr19:45971246..45971265,+!p1@FOSB!0.83!115.94!FOSB;;chr14:21994337..21994442,-!p1@SALL2!0.83!16.74!SALL2;;chr2:19558373..19558392,-!p1@OSR1!0.83!16.74!OSR1;;chr20:55204351..55204377,+!p1@TFAP2C!0.83!7.47!TFAP2C;;chr1:75600333..75600348,+!p5@LHX8!0.83!5.81!LHX8;;chr2:74741569..74741620,+!p1@TLX2!0.83!5.81!TLX2;;chr8:128752734..128752763,+!p13@MYC!0.82!6.78!MYC;;chr8:106330543..106330554,+!p4@ZFPM2!0.82!5.53!ZFPM2;;chr2:162272970..162272981,+!p10@TBR1!0.82!5.53!TBR1;;chr1:149858461..149858479,+!p1@BOLA1!0.81!2320.38!BOLA1;;chr8:77593474..77593612,+!p1@ZFHX4!0.81!24.90!ZFHX4;;chr1:23696308..23696339,-!p2@ZNF436!0.81!12.17!ZNF436;;chr1:164528616..164528660,+!p5@PBX1!0.81!11.62!PBX1;;chr8:128750493..128750522,+!p10@MYC!0.81!8.16!MYC;;chr8:80680024..80680046,-!p2@HEY1!0.81!6.23!HEY1;;chr9:77112244..77112262,+!p1@RORB!0.81!6.23!RORB;;chr12:54393880..54393962,+!p1@HOXC9!0.81!5.40!HOXC9;;chr1:247495140..247495177,-!p1@ZNF496!0.80!61.70!ZNF496;;chr15:57511609..57511651,+!p2@TCF12!0.80!9.41!TCF12;;chr17:46132044..46132080,+!p4@NFE2L1!0.80!5.26!NFE2L1;;chr2:180726254..180726275,-!p4@ZNF385B!0.80!5.26!ZNF385B;;chr2:182545282..182545294,-!p2@NEUROD1!0.80!5.26!NEUROD1;;chr20:42295713..42295738,+!p2@MYBL2!0.79!33.07!MYBL2;;chr19:37096139..37096170,-!p2@ZNF529!0.79!15.36!ZNF529;;chr11:8102819..8102845,+!p3@TUB!0.79!6.50!TUB;;chr10:131762504..131762555,-!p1@EBF3!0.79!5.12!EBF3;;chr2:180726040..180726052,-!p2@ZNF385B!0.79!5.12!ZNF385B;;chr4:18023350..18023385,-!p1@LCORL!0.78!46.90!LCORL;;chr20:49547691..49547724,-!p2@ADNP!0.78!34.03!ADNP;;chr2:162273241..162273253,+!p4@TBR1!0.78!4.98!TBR1;;chr6:21597765..21597779,+!p2@SOX4!0.77!43.16!SOX4;;chr18:56532100..56532130,+!p1@ZNF532!0.77!9.55!ZNF532;;chr8:73921136..73921151,+!p2@TERF1!0.77!7.75!TERF1;;chr17:47892398..47892407,+!p2@KAT7!0.77!4.84!KAT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WR;;chr19:12175535..12175554,+!p1@ZNF844!0.36!10.79!ZNF844;;chr16:2273645..2273671,+!p2@E4F1!0.36!10.10!E4F1;;chr1:161736072..161736093,+!p2@ATF6!0.36!8.99!ATF6;;chrX:83757450..83757485,-!p1@HDX!0.36!8.30!HDX;;chr19:37341752..37341816,+!p1@ZNF345!0.36!5.67!ZNF345;;chr8:182424..182462,+!p1@ZNF596!0.36!4.70!ZNF596;;chr20:31350184..31350200,+!p1@DNMT3B!0.36!3.60!DNMT3B;;chr20:48807779..48807802,+!p10@CEBPB!0.36!2.63!CEBPB;;chr4:87968203..87968221,+!p11@AFF1!0.36!2.63!AFF1;;chr1:247242107..247242120,-!p2@ZNF670!0.36!2.49!ZNF670;;chr1:221052700..221052730,+!p5@HLX!0.36!2.35!HLX;;chrX:76937858..76937877,-!p5@ATRX!0.36!2.21!ATRX;;chr3:71632894..71632909,-!p17@FOXP1!0.36!2.21!FOXP1;;chr14:24025106..24025172,-!p2@ZFHX2!0.36!1.94!ZFHX2;;chr3:150126200..150126211,+!p11@TSC22D2!0.36!1.80!TSC22D2;;chr18:45457909..45457939,-!p8@SMAD2!0.36!1.80!SMAD2;;chr3:47823298..47823423,-!p1@SMARCC1!0.35!68.34!SMARCC1;;chr19:36705998..36706021,+!p2@ZNF146!0.35!28.64!ZNF146;;chr12:104531945..104531996,-!p1@NFYB!0.35!27.53!NFYB;;chr4:26322419..26322479,+!p2@RBPJ!0.35!23.93!RBPJ;;chr10:105110831..105110885,-!p1@PCGF6!0.35!19.09!PCGF6;;chr19:1863591..1863611,-!p2@KLF16!0.35!18.82!KLF16;;chr19:37019136..37019178,-!p1@ZNF260!0.35!16.05!ZNF260;;chr3:141868357..141868393,-!p3@TFDP2!0.35!12.73!TFDP2;;chr7:64838786..64838809,+!p2@ZNF92!0.35!10.93!ZNF92;;chr19:23870007..23870022,-!p2@ZNF675!0.35!5.95!ZNF675;;chr1:61547894..61547968,+!p2@NFIA!0.35!5.26!NFIA;;chr17:41322281..41322328,-!p2@BRCA1!0.35!5.12!BRCA1;;chr19:36705617..36705644,+!p4@ZNF146!0.35!5.12!ZNF146;;chr19:12721790..12721810,+!p2@ZNF791!0.35!4.84!ZNF791;;chr19:37178482..37178520,+!p1@ZNF567!0.35!4.70!ZNF567;;chr14:45722287..45722308,-!p2@MIS18BP1!0.35!4.70!MIS18BP1;;chr2:74229812..74229867,+!p1@TET3!0.35!4.43!TET3;;chr9:32550839..32550962,-!p3@TOPORS!0.35!4.29!TOPORS;;chr15:66994663..66994680,+!p1@SMAD6!0.35!4.15!SMAD6;;chr19:35168633..35168652,+!p2@ZNF302!0.35!4.15!ZNF302;;chr1:153939955..153940009,+!p2@CREB3L4!0.35!4.01!CREB3L4;;chr4:146402925..146402957,+!p4@SMAD1!0.35!3.87!SMAD1;;chr19:35417798..35417842,+!p1@ZNF30!0.35!2.63!ZNF30;;chr6:21597370..21597408,+!p5@SOX4!0.35!2.49!SOX4;;chr1:35657082..35657099,-!p8@SFPQ!0.35!2.35!SFPQ;;chr14:64970593..64970627,+!p5@ZBTB1!0.35!2.21!ZBTB1;;chr3:44754176..44754196,+!p2@ZNF502!0.35!2.08!ZNF502;;chr19:52391220..52391251,-!p2@ZNF577!0.35!2.08!ZNF577;;chr20:62680984..62680999,-!p1@SOX18!0.35!1.94!SOX18;;chr14:69260117..69260141,-!p4@ZFP36L1!0.35!1.94!ZFP36L1;;chr17:36873780..36873800,+!p5@MLLT6!0.35!1.94!MLLT6;;chr9:127533519..127533573,-!p2@NR6A1!0.35!1.66!NR6A1;;chr5:124082580..124082603,-!p4@ZNF608!0.35!1.52!ZNF608;;chr8:106330848..106330859,+!p5@ZFPM2!0.35!1.25!ZFPM2;;chr8:128747729..128747748,+!p14@MYC!0.35!1.25!MYC;;chr15:90294062..90294079,-!p2@MESP1!0.35!1.25!MESP1;;chr18:56532079..56532095,+!p8@ZNF532!0.35!1.25!ZNF532;;chr18:6414849..6414876,-!p2@L3MBTL4!0.35!1.25!L3MBTL4;;chr19:50435673..50435690,+!p8@ATF5!0.35!1.25!ATF5;;chr19:58545369..58545404,+!p2@ZSCAN1!0.35!1.25!ZSCAN1;;chr1:227751287..227751298,+!p2@ZNF678!0.35!1.25!ZNF678;;chr1:40367668..40367684,-!p2@MYCL1!0.35!1.25!MYCL1;;chr1:40367692..40367703,-!p3@MYCL1!0.35!1.25!MYCL1;;chr12:54394059..54394088,+!p3@HOXC9!0.35!1.25!HOXC9;;chr12:54410948..54410992,+!p3@HOXC5!0.35!1.25!HOXC5;;chr9:86594363..86594374,-!p@chr9:86594363..86594374,-!0.35!1.25!HNRPK;;chr2:175199675..175199688,+!p1@SP9!0.35!1.25!SP9;;chr2:42721205..42721307,+!p4@MTA3!0.35!1.25!MTA3;;chr2:85981969..85982019,+!p6@ATOH8!0.35!1.25!ATOH8;;chr3:183415558..183415649,+!p1@YEATS2!0.34!53.13!YEATS2;;chr1:161736102..161736123,+!p1@ATF6!0.34!52.30!ATF6;;chr1:211432700..211432753,+!p1@RCOR3!0.34!36.52!RCOR3;;chr14:74318611..74318682,+!p1@PTGR2,p2@ZNF410!0.34!13.14!ZNF410;;chr11:123612319..123612395,-!p1@ZNF202!0.34!10.79!ZNF202;;chr3:44519131..44519186,-!p1@ZNF445!0.34!10.51!ZNF445;;chr19:12595586..12595637,-!p2@ZNF709!0.34!7.33!ZNF709;;chr19:58331073..58331084,+!p3@ZNF587!0.34!6.78!ZNF587;;chr1:151043216..151043256,+!p1@GABPB2!0.34!6.23!GABPB2;;chr19:11071652..11071682,+!p3@SMARCA4!0.34!6.23!SMARCA4;;chr19:44809143..44809187,-!p1@ZNF235!0.34!5.26!ZNF235;;chr10:38146510..38146576,-!p1@ZNF248!0.34!4.98!ZNF248;;chr9:37465273..37465338,-!p2@ZBTB5!0.34!4.43!ZBTB5;;chr19:42759300..42759324,-!p2@ERF!0.34!4.29!ERF;;chr15:96874244..96874259,+!p5@NR2F2!0.34!4.01!NR2F2;;chr1:249153232..249153251,-!p2@ZNF692!0.34!3.87!ZNF692;;chr2:157199008..157199023,-!p3@NR4A2!0.34!3.46!NR4A2;;chr19:12203100..12203132,+!p1@ZNF788!0.34!3.32!ZNF788;;chr16:3285119..3285133,-!p2@ZNF200!0.34!3.18!ZNF200;;chr19:36909484..36909525,-!p2@ZFP82!0.34!3.18!ZFP82;;chr9:102584128..102584144,+!p3@NR4A3!0.34!3.04!NR4A3;;chr19:36980756..36980795,-!p3@ZNF566!0.34!2.49!ZNF566;;chr12:432372..432377,-!p3@KDM5A!0.34!2.35!KDM5A;;chr14:105886300..105886316,+!p2@MTA1!0.34!2.35!MTA1;;chr19:57019215..57019250,+!p1@ZNF471!0.34!2.21!ZNF471;;chr12:125002827..125002855,-!p5@NCOR2!0.34!2.08!NCOR2;;chr6:27356527..27356557,+!p2@ZNF391!0.34!1.94!ZNF391;;chr15:71184837..71184877,-!p2@THAP10!0.34!1.94!THAP10;;chr15:96869114..96869160,+!p11@NR2F2!0.34!1.94!NR2F2;;chr1:45805907..45805918,+!p5@TOE1!0.34!1.80!TOE1;;chr12:7079807..7079848,-!p1@PHB2!0.33!346.56!PHB2;;chr11:57103327..57103372,-!p1@SSRP1!0.33!91.17!SSRP1;;chr20:34359925..34359991,+!p1@PHF20!0.33!85.08!PHF20;;chr15:57025675..57025718,-!p1@ZNF280D!0.33!41.50!ZNF280D;;chr12:69753448..69753577,+!p1@YEATS4!0.33!37.77!YEATS4;;chr10:124768300..124768334,-!p1@IKZF5!0.33!23.38!IKZF5;;chr19:57946684..57946723,+!p1@ZNF749!0.33!20.75!ZNF749;;chr4:47916588..47916607,-!p1@NFXL1!0.33!15.36!NFXL1;;chr14:100705200..100705237,+!p3@YY1!0.33!14.11!YY1;;chr6:108880956..108881011,+!p1@FOXO3!0.33!12.17!FOXO3;;chr12:3068544..3068597,+!p1@TEAD4!0.33!11.07!TEAD4;;chr19:37701396..37701453,-!p1@ZNF585B!0.33!10.38!ZNF585B;;chr19:19516464..19516492,+!p4@GATAD2A!0.33!9.13!GATAD2A;;chr6:28092375..28092412,+!p1@ZSCAN16!0.33!7.47!ZSCAN16;;chr10:44101850..44101896,+!p1@ZNF485!0.33!5.40!ZNF485;;chr3:48282536..48282586,+!p2@ZNF589!0.33!4.57!ZNF589;;chr19:8942962..8942987,-!p1@ZNF558!0.33!4.57!ZNF558;;chr1:8877735..8877760,-!p8@RERE!0.33!4.43!RERE;;chr6:20403727..20403769,+!p4@E2F3!0.33!3.87!E2F3;;chr3:126194815..126194848,-!p2@ZXDC!0.33!3.46!ZXDC;;chr1:221053049..221053075,+!p3@HLX!0.33!2.63!HLX;;chr3:40547505..40547545,+!p2@ZNF620!0.33!2.35!ZNF620;;chr19:12551785..12551823,-!p1@ZNF443!0.33!2.35!ZNF443;;chr1:247095286..247095297,-!p4@AHCTF1!0.33!1.94!AHCTF1;;chr1:244219038..244219054,+!p3@ZNF238!0.33!1.80!ZNF238;;chr22:30162893..30162907,-!p2@ZMAT5!0.33!1.66!ZMAT5;;chr4:146860163..146860188,-!p5@ZNF827!0.33!1.38!ZNF827;;chr19:45579762..45579772,-!p2@ZNF296!0.33!1.38!ZNF296;;chr19:6424813..6424835,-!p1@KHSRP!0.32!118.84!KHSRP;;chr17:80477571..80477637,+!p1@FOXK2!0.32!57.00!FOXK2;;chr3:14989076..14989113,+!p1@NR2C2!0.32!39.29!NR2C2;;chr10:96122682..96122730,-!p1@NOC3L!0.32!27.39!NOC3L;;chr2:27805880..27805967,+!p1@ZNF512!0.32!26.15!ZNF512;;chr4:124374..124410,+!p2@ZNF718!0.32!18.95!ZNF718;;chr6:41514078..41514158,+!p1@FOXP4!0.32!16.74!FOXP4;;chr1:205601093..205601158,-!p1@ELK4!0.32!16.19!ELK4;;chr1:93544821..93544861,+!p1@MTF2!0.32!14.25!MTF2;;chr2:174828892..174828972,-!p2@SP3!0.32!13.28!SP3;;chr19:58740266..58740297,+!p1@ZNF544!0.32!13.14!ZNF544;;chr1:155532531..155532605,-!p1@ASH1L!0.32!12.17!ASH1L;;chr1:14026671..14026705,+!p2@PRDM2!0.32!10.93!PRDM2;;chr9:125693757..125693818,-!p1@ZBTB26!0.32!7.75!ZBTB26;;chr3:52719546..52719636,-!p3@PBRM1!0.32!5.95!PBRM1;;chr12:6798056..6798102,-!p3@ZNF384!0.32!4.84!ZNF384;;chr19:56092252..56092287,-!p2@ZNF579!0.32!4.57!ZNF579;;chr20:25677443..25677464,-!p2@ZNF337!0.32!3.74!ZNF337;;chr6:42419514..42419606,-!p1@TRERF1!0.32!3.46!TRERF1;;chr3:23986748..23986761,+!p3@NR1D2!0.32!3.32!NR1D2;;chr5:178157700..178157734,-!p3@ZNF354A!0.32!3.18!ZNF354A;;chr14:23755247..23755278,-!p2@HOMEZ!0.32!3.04!HOMEZ;;chr12:52430894..52430952,+!p3@NR4A1!0.32!2.91!NR4A1;;chr2:121493492..121493537,+!p2@GLI2!0.32!2.35!GLI2;;chr3:178789648..178789661,-!p4@ZMAT3!0.32!2.21!ZMAT3;;chr19:53496806..53496848,-!p2@ZNF702P!0.32!2.08!ZNF702P;;chr19:38085768..38085821,+!p1@ZNF540!0.32!2.08!ZNF540;;chr15:96875041..96875052,+!p17@NR2F2!0.32!1.94!NR2F2;;chr17:38792325..38792330,-!p3@SMARCE1!0.32!1.94!SMARCE1;;chr4:103422076..103422117,+!p5@NFKB1!0.32!1.94!NFKB1;;chr10:76585303..76585354,+!p4@KAT6B!0.32!1.94!KAT6B;;chr10:98592751..98592765,+!p5@LCOR!0.32!1.66!LCOR;;chr10:22022947..22022965,+!p7@MLLT10!0.32!1.52!MLLT10;;chr10:124895472..124895508,+!p1@HMX3!0.32!1.11!HMX3;;chr12:45444873..45444888,-!p1@DBX2!0.32!1.11!DBX2;;chr12:54447909..54447922,+!p10@HOXC6,p9@HOXC4!0.32!1.11!HOXC6;;chr12:66218413..66218418,+!p17@HMGA2!0.32!1.11!HMGA2;;chr13:37494342..37494348,-!p7@SMAD9!0.32!1.11!SMAD9;;chr13:37494498..37494511,-!p6@SMAD9!0.32!1.11!SMAD9;;
|sample_donor(cell lot)=
|ffid_belonging_in_development=CL:0000133,CL:0000339,CL:0000221,UBERON:0002532,UBERON:0006601,UBERON:0006238,UBERON:0010316
|sample_sex=male
|sample_age=6
|sample_ethnicity=C
|rna_rin=
|rna_od260/230=2.18
|rna_od260/280=2.09
|sample_cell_type=neurectodermal cell
|sample_cell_line=D283 Med
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=medulloblastoma
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=92.0381
|rna_concentration=1.67342
|sample_note=
|profile_hcage=CNhs12805,LSID972,release012,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000030,CL:0000055,CL:0000095,CL:0000123,CL:0000125,CL:0000133,CL:0000144,CL:0000219,CL:0000220,CL:0000221,CL:0000243,CL:0000255,CL:0000333,CL:0000339,CL:0000548,CL:0002319,CL:0002321,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000033,UBERON:0000061,UBERON:0000073,UBERON:0000153,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000480,UBERON:0000481,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000955,UBERON:0001016,UBERON:0001017,UBERON:0001062,UBERON:0002050,UBERON:0002532,UBERON:0004121,UBERON:0005423,UBERON:0005743
|ancestors_in_disease_facet=DOID:0050686,DOID:14566,DOID:162,DOID:3093,DOID:4
|sample_description=
|fonse_cell_line=FF:0100255
|fonse_cell_line=FF:0100255
|fonse_cell_line_closure=FF:0100255
|fonse_cell_line_closure=FF:0100255
Line 66: Line 42:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
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|rna_box=111
|rna_catalog_number=
|rna_concentration=1.67342
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=2.18
|rna_od260/280=2.09
|rna_position=E1
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=1.11E+03
|rna_weight_ug=92.0381
|rnaseq_library_id=RDhi10089
|sample_age=6
|sample_category=cell lines
|sample_cell_catalog=HTB185
|sample_cell_line=D283 Med
|sample_cell_lot=
|sample_cell_type=neurectodermal cell
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=ATCC
|sample_description=
|sample_dev_stage=
|sample_disease=medulloblastoma
|sample_donor(cell lot)=
|sample_ethnicity=C
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;6.35612655664328e-293!GO:0043231;intracellular membrane-bound organelle;2.4705354756463e-259!GO:0043227;membrane-bound organelle;3.9053591538467e-259!GO:0043226;organelle;3.9053591538467e-259!GO:0043229;intracellular organelle;1.26159028456311e-258!GO:0005634;nucleus;1.12813548674313e-155!GO:0044422;organelle part;6.56260905561296e-150!GO:0044446;intracellular organelle part;9.40072947853222e-149!GO:0005737;cytoplasm;1.66234551269932e-145!GO:0044237;cellular metabolic process;2.24232815840722e-116!GO:0044238;primary metabolic process;5.27023466587864e-116!GO:0043170;macromolecule metabolic process;3.80402524346133e-114!GO:0032991;macromolecular complex;3.53839805886899e-109!GO:0030529;ribonucleoprotein complex;5.40853559304395e-99!GO:0044444;cytoplasmic part;4.09511039176944e-97!GO:0003723;RNA binding;8.91631265490428e-97!GO:0044428;nuclear part;5.48302156317364e-96!GO:0010467;gene expression;4.25622764175784e-90!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.55736919206924e-90!GO:0043283;biopolymer metabolic process;9.22992521733856e-90!GO:0043233;organelle lumen;3.90415732295641e-88!GO:0031974;membrane-enclosed lumen;3.90415732295641e-88!GO:0003676;nucleic acid binding;3.29915960841876e-72!GO:0006396;RNA processing;8.73095501350316e-66!GO:0005515;protein binding;1.42252909161694e-63!GO:0031981;nuclear lumen;2.50595812709592e-61!GO:0016070;RNA metabolic process;1.85742776569003e-56!GO:0005739;mitochondrion;3.35612072498587e-56!GO:0016043;cellular component organization and biogenesis;1.55661635348289e-54!GO:0005840;ribosome;1.21960062159061e-53!GO:0043234;protein complex;8.14107054764406e-53!GO:0016071;mRNA metabolic process;2.85857217919011e-51!GO:0006412;translation;7.10994676910654e-51!GO:0006259;DNA metabolic process;4.13926870350528e-48!GO:0008380;RNA splicing;2.6994214565546e-46!GO:0003735;structural constituent of ribosome;3.87353195684961e-45!GO:0006397;mRNA processing;2.93491503218498e-44!GO:0043228;non-membrane-bound organelle;6.44674198639441e-41!GO:0043232;intracellular non-membrane-bound organelle;6.44674198639441e-41!GO:0006996;organelle organization and biogenesis;1.12990325100684e-40!GO:0033279;ribosomal subunit;1.32059909225097e-40!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.93388400431567e-39!GO:0007049;cell cycle;1.48619962257788e-38!GO:0044249;cellular biosynthetic process;2.13348281395893e-38!GO:0005654;nucleoplasm;5.04673487682818e-38!GO:0033036;macromolecule localization;1.1930700495784e-37!GO:0044429;mitochondrial part;1.7646883147379e-36!GO:0019538;protein metabolic process;2.25565609240963e-36!GO:0031090;organelle membrane;2.83986779458856e-36!GO:0009059;macromolecule biosynthetic process;3.61499121779881e-36!GO:0015031;protein transport;2.39291538613027e-35!GO:0009058;biosynthetic process;3.329392617445e-35!GO:0065003;macromolecular complex assembly;2.10850486929333e-34!GO:0031967;organelle envelope;2.63282030786291e-34!GO:0031975;envelope;3.47818446534409e-34!GO:0046907;intracellular transport;6.51066210862286e-33!GO:0005681;spliceosome;1.11144604923151e-32!GO:0008104;protein localization;2.94341747826869e-32!GO:0044260;cellular macromolecule metabolic process;3.20130049358318e-32!GO:0044267;cellular protein metabolic process;4.33454352339145e-32!GO:0044451;nucleoplasm part;6.32524232918421e-32!GO:0005830;cytosolic ribosome (sensu Eukaryota);6.62789218774238e-32!GO:0022607;cellular component assembly;4.44020162516246e-31!GO:0045184;establishment of protein localization;5.61351827777193e-31!GO:0000166;nucleotide binding;6.39627609853775e-31!GO:0022402;cell cycle process;3.34765175548104e-30!GO:0006974;response to DNA damage stimulus;4.48085948920115e-30!GO:0005829;cytosol;1.74280420684784e-29!GO:0006886;intracellular protein transport;5.36796847631051e-27!GO:0005694;chromosome;1.98803200105846e-26!GO:0006281;DNA repair;2.23384402948713e-26!GO:0000278;mitotic cell cycle;2.28512889881951e-26!GO:0044445;cytosolic part;1.1835656991178e-25!GO:0051276;chromosome organization and biogenesis;1.79597763373479e-24!GO:0016874;ligase activity;2.55189851387518e-24!GO:0051649;establishment of cellular localization;3.10956201311567e-24!GO:0051641;cellular localization;4.78296177556595e-24!GO:0005730;nucleolus;7.16280263219954e-24!GO:0006512;ubiquitin cycle;1.07649152298461e-22!GO:0019866;organelle inner membrane;1.15991454985123e-22!GO:0000087;M phase of mitotic cell cycle;2.35075290058151e-22!GO:0044427;chromosomal part;3.17322520068096e-22!GO:0005740;mitochondrial envelope;4.95345280443816e-22!GO:0007067;mitosis;8.24239151264794e-22!GO:0022618;protein-RNA complex assembly;9.22079454339178e-22!GO:0022403;cell cycle phase;2.1445516407338e-21!GO:0031966;mitochondrial membrane;3.7826987029593e-21!GO:0015935;small ribosomal subunit;9.65582539873452e-21!GO:0019222;regulation of metabolic process;1.45765682535486e-20!GO:0015934;large ribosomal subunit;1.73954791561367e-20!GO:0005743;mitochondrial inner membrane;2.07513308976978e-20!GO:0006457;protein folding;5.13607543842543e-20!GO:0032553;ribonucleotide binding;5.27986688558829e-20!GO:0032555;purine ribonucleotide binding;5.27986688558829e-20!GO:0051301;cell division;5.39068879261449e-20!GO:0016462;pyrophosphatase activity;5.67954800553788e-20!GO:0006260;DNA replication;5.733981130566e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;7.23405984914326e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;8.20893774611424e-20!GO:0017111;nucleoside-triphosphatase activity;1.2749427704479e-19!GO:0006325;establishment and/or maintenance of chromatin architecture;2.14049765522835e-19!GO:0005524;ATP binding;2.30851558739461e-19!GO:0006350;transcription;2.89617600403139e-19!GO:0032559;adenyl ribonucleotide binding;3.10828226659717e-19!GO:0009719;response to endogenous stimulus;3.80205636122911e-19!GO:0000279;M phase;4.16652893906982e-19!GO:0017076;purine nucleotide binding;5.03170058802166e-19!GO:0008134;transcription factor binding;1.18678518113989e-18!GO:0006323;DNA packaging;1.34014689159027e-18!GO:0008135;translation factor activity, nucleic acid binding;1.90537781295026e-18!GO:0031323;regulation of cellular metabolic process;3.10992617980762e-18!GO:0044455;mitochondrial membrane part;5.20495758765612e-18!GO:0030554;adenyl nucleotide binding;5.7931881491391e-18!GO:0042254;ribosome biogenesis and assembly;8.34608815638364e-18!GO:0006119;oxidative phosphorylation;1.00931694099805e-17!GO:0050794;regulation of cellular process;1.77399912160252e-17!GO:0031980;mitochondrial lumen;2.43568782988645e-17!GO:0005759;mitochondrial matrix;2.43568782988645e-17!GO:0010468;regulation of gene expression;3.39379451688558e-17!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);8.63448145704471e-17!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;9.75480866899192e-17!GO:0004386;helicase activity;2.46879283374271e-16!GO:0032774;RNA biosynthetic process;3.40159096542001e-16!GO:0006511;ubiquitin-dependent protein catabolic process;4.08081772737126e-16!GO:0000398;nuclear mRNA splicing, via spliceosome;5.5356461668147e-16!GO:0000375;RNA splicing, via transesterification reactions;5.5356461668147e-16!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;5.5356461668147e-16!GO:0044265;cellular macromolecule catabolic process;5.53985964118233e-16!GO:0006351;transcription, DNA-dependent;5.62862492257037e-16!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);6.56316349651498e-16!GO:0006366;transcription from RNA polymerase II promoter;1.13611028598967e-15!GO:0019941;modification-dependent protein catabolic process;1.17117338671181e-15!GO:0043632;modification-dependent macromolecule catabolic process;1.17117338671181e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;1.28719055745727e-15!GO:0016887;ATPase activity;1.62842340613056e-15!GO:0042623;ATPase activity, coupled;2.54501360546862e-15!GO:0012505;endomembrane system;3.0463187569742e-15!GO:0044257;cellular protein catabolic process;3.69874436832852e-15!GO:0006605;protein targeting;6.23750358378767e-15!GO:0048770;pigment granule;7.39927903953636e-15!GO:0042470;melanosome;7.39927903953636e-15!GO:0045449;regulation of transcription;9.10286774133582e-15!GO:0000074;regulation of progression through cell cycle;1.02151421653504e-14!GO:0003677;DNA binding;1.05513638100438e-14!GO:0051726;regulation of cell cycle;1.19051331400693e-14!GO:0043412;biopolymer modification;2.68922297754141e-14!GO:0031965;nuclear membrane;2.91564859293258e-14!GO:0043285;biopolymer catabolic process;3.11151572018077e-14!GO:0015630;microtubule cytoskeleton;4.13713798255825e-14!GO:0005746;mitochondrial respiratory chain;4.50312486365502e-14!GO:0003743;translation initiation factor activity;7.76498763849713e-14!GO:0006413;translational initiation;1.00871331953003e-13!GO:0044453;nuclear membrane part;1.02680815605285e-13!GO:0016568;chromatin modification;1.25838627323395e-13!GO:0006403;RNA localization;1.3941646245797e-13!GO:0016604;nuclear body;1.43539225875012e-13!GO:0006355;regulation of transcription, DNA-dependent;3.13778758423295e-13!GO:0008026;ATP-dependent helicase activity;3.45334320064646e-13!GO:0006399;tRNA metabolic process;3.96811446715927e-13!GO:0050657;nucleic acid transport;4.03825169170893e-13!GO:0051236;establishment of RNA localization;4.03825169170893e-13!GO:0050658;RNA transport;4.03825169170893e-13!GO:0005635;nuclear envelope;5.29076376898439e-13!GO:0005643;nuclear pore;6.87990669776089e-13!GO:0005761;mitochondrial ribosome;9.83508642980525e-13!GO:0000313;organellar ribosome;9.83508642980525e-13!GO:0051082;unfolded protein binding;1.14866888913373e-12!GO:0050136;NADH dehydrogenase (quinone) activity;1.38324019848267e-12!GO:0003954;NADH dehydrogenase activity;1.38324019848267e-12!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.38324019848267e-12!GO:0009057;macromolecule catabolic process;1.52669521161161e-12!GO:0050789;regulation of biological process;1.80575486956514e-12!GO:0016607;nuclear speck;3.3261737307054e-12!GO:0003712;transcription cofactor activity;3.95985148948338e-12!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.12615727464744e-12!GO:0006364;rRNA processing;4.42453678374373e-12!GO:0006446;regulation of translational initiation;5.67438409866784e-12!GO:0000785;chromatin;5.96860618137334e-12!GO:0030163;protein catabolic process;8.01515537162164e-12!GO:0006913;nucleocytoplasmic transport;8.75074146550338e-12!GO:0006464;protein modification process;9.54397712412234e-12!GO:0016072;rRNA metabolic process;1.24211777025369e-11!GO:0006333;chromatin assembly or disassembly;1.58311692717554e-11!GO:0051169;nuclear transport;2.25941751690558e-11!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;3.12777424450962e-11!GO:0065004;protein-DNA complex assembly;3.13206250305266e-11!GO:0043687;post-translational protein modification;3.19480964358516e-11!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.19480964358516e-11!GO:0004812;aminoacyl-tRNA ligase activity;3.19480964358516e-11!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.19480964358516e-11!GO:0008565;protein transporter activity;3.23634929855746e-11!GO:0051028;mRNA transport;4.04629217069723e-11!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.34422540650495e-11!GO:0042775;organelle ATP synthesis coupled electron transport;5.3303969292488e-11!GO:0042773;ATP synthesis coupled electron transport;5.3303969292488e-11!GO:0044248;cellular catabolic process;6.89155485620495e-11!GO:0043038;amino acid activation;7.10734668504362e-11!GO:0006418;tRNA aminoacylation for protein translation;7.10734668504362e-11!GO:0043039;tRNA aminoacylation;7.10734668504362e-11!GO:0030964;NADH dehydrogenase complex (quinone);9.11353157735741e-11!GO:0045271;respiratory chain complex I;9.11353157735741e-11!GO:0005747;mitochondrial respiratory chain complex I;9.11353157735741e-11!GO:0008639;small protein conjugating enzyme activity;1.09209009784441e-10!GO:0004842;ubiquitin-protein ligase activity;1.62619835193058e-10!GO:0065002;intracellular protein transport across a membrane;1.62837916052671e-10!GO:0000502;proteasome complex (sensu Eukaryota);1.63691930218795e-10!GO:0051186;cofactor metabolic process;1.76408638325846e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.09070350147064e-10!GO:0043566;structure-specific DNA binding;2.57506757404936e-10!GO:0005667;transcription factor complex;3.66062433607163e-10!GO:0046930;pore complex;3.81157289197287e-10!GO:0005819;spindle;5.23486836508749e-10!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;7.37218837563332e-10!GO:0044432;endoplasmic reticulum part;7.45195661501711e-10!GO:0019787;small conjugating protein ligase activity;9.74213810592182e-10!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.00729415520446e-09!GO:0006261;DNA-dependent DNA replication;1.23701287690207e-09!GO:0000775;chromosome, pericentric region;2.66526950832644e-09!GO:0003697;single-stranded DNA binding;2.77538210750361e-09!GO:0017038;protein import;3.36974450883344e-09!GO:0030532;small nuclear ribonucleoprotein complex;4.27196945359159e-09!GO:0005783;endoplasmic reticulum;5.24767379262933e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;6.47765668978286e-09!GO:0016881;acid-amino acid ligase activity;6.48191542066598e-09!GO:0006732;coenzyme metabolic process;6.83740320000308e-09!GO:0005794;Golgi apparatus;1.15484828767587e-08!GO:0016192;vesicle-mediated transport;1.9229240408095e-08!GO:0048193;Golgi vesicle transport;1.98274293264413e-08!GO:0032446;protein modification by small protein conjugation;2.18650841446819e-08!GO:0006461;protein complex assembly;2.61859292035245e-08!GO:0006163;purine nucleotide metabolic process;3.44478022292681e-08!GO:0009259;ribonucleotide metabolic process;3.92097450093336e-08!GO:0016567;protein ubiquitination;4.11421997788825e-08!GO:0005813;centrosome;4.21076532009288e-08!GO:0008094;DNA-dependent ATPase activity;4.84043880601478e-08!GO:0007051;spindle organization and biogenesis;7.49760053716088e-08!GO:0000245;spliceosome assembly;7.72722246530625e-08!GO:0006164;purine nucleotide biosynthetic process;9.97758040533567e-08!GO:0005815;microtubule organizing center;1.03621146313762e-07!GO:0045786;negative regulation of progression through cell cycle;1.92592490158693e-07!GO:0016779;nucleotidyltransferase activity;2.5715189431761e-07!GO:0000075;cell cycle checkpoint;2.67431316547879e-07!GO:0009260;ribonucleotide biosynthetic process;2.72014580507297e-07!GO:0009150;purine ribonucleotide metabolic process;2.86701011370917e-07!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.92929290846506e-07!GO:0003682;chromatin binding;3.52229715037837e-07!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.17614273774142e-07!GO:0016564;transcription repressor activity;5.09757087138058e-07!GO:0016740;transferase activity;5.49271879027486e-07!GO:0003724;RNA helicase activity;5.6297614706549e-07!GO:0031324;negative regulation of cellular metabolic process;7.03436376656474e-07!GO:0045333;cellular respiration;7.70288816903081e-07!GO:0051329;interphase of mitotic cell cycle;8.42587348621739e-07!GO:0003714;transcription corepressor activity;8.58961180812919e-07!GO:0009152;purine ribonucleotide biosynthetic process;8.64666486153033e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;9.06516742638297e-07!GO:0009060;aerobic respiration;1.35798668695757e-06!GO:0045259;proton-transporting ATP synthase complex;1.41871428079272e-06!GO:0051427;hormone receptor binding;1.49248193643142e-06!GO:0065007;biological regulation;1.51283165434358e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.69487800407188e-06!GO:0005657;replication fork;1.69866472858009e-06!GO:0003713;transcription coactivator activity;1.73994731561864e-06!GO:0000151;ubiquitin ligase complex;1.86500994128945e-06!GO:0031497;chromatin assembly;1.87953119808413e-06!GO:0019829;cation-transporting ATPase activity;1.96183255432014e-06!GO:0003899;DNA-directed RNA polymerase activity;2.07181494796872e-06!GO:0006334;nucleosome assembly;2.14543685650752e-06!GO:0016853;isomerase activity;2.14543685650752e-06!GO:0006606;protein import into nucleus;2.33782307736935e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.49375023777486e-06!GO:0009055;electron carrier activity;2.55361561693768e-06!GO:0051170;nuclear import;2.74876598415749e-06!GO:0015986;ATP synthesis coupled proton transport;3.16509915842306e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.16509915842306e-06!GO:0005789;endoplasmic reticulum membrane;3.42442845626251e-06!GO:0035257;nuclear hormone receptor binding;3.47372806064376e-06!GO:0009141;nucleoside triphosphate metabolic process;3.58465798904237e-06!GO:0051325;interphase;3.67544042908451e-06!GO:0009199;ribonucleoside triphosphate metabolic process;3.79040494241757e-06!GO:0016563;transcription activator activity;4.05466762691934e-06!GO:0051188;cofactor biosynthetic process;4.19763309149255e-06!GO:0016363;nuclear matrix;4.46250015184015e-06!GO:0005793;ER-Golgi intermediate compartment;4.59313092576398e-06!GO:0005874;microtubule;4.78543137329426e-06!GO:0003690;double-stranded DNA binding;5.10920124887268e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;5.36512498841141e-06!GO:0009142;nucleoside triphosphate biosynthetic process;5.83043638786285e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;5.83043638786285e-06!GO:0007017;microtubule-based process;6.34744663756062e-06!GO:0016481;negative regulation of transcription;6.37510052739559e-06!GO:0006099;tricarboxylic acid cycle;6.58876688579911e-06!GO:0046356;acetyl-CoA catabolic process;6.58876688579911e-06!GO:0005788;endoplasmic reticulum lumen;6.90429161773974e-06!GO:0015631;tubulin binding;7.05326270992478e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;7.47313837288583e-06!GO:0009144;purine nucleoside triphosphate metabolic process;7.47313837288583e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;8.82791901198909e-06!GO:0000226;microtubule cytoskeleton organization and biogenesis;8.86012159373345e-06!GO:0009892;negative regulation of metabolic process;9.17909029935495e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.19872329016864e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.19872329016864e-05!GO:0051168;nuclear export;1.31867032737161e-05!GO:0000776;kinetochore;1.42958764441363e-05!GO:0007005;mitochondrion organization and biogenesis;1.58895955905638e-05!GO:0006302;double-strand break repair;1.60401744168612e-05!GO:0003729;mRNA binding;1.68052433012869e-05!GO:0006613;cotranslational protein targeting to membrane;1.69053292720049e-05!GO:0043623;cellular protein complex assembly;1.81112500225182e-05!GO:0006383;transcription from RNA polymerase III promoter;1.84178907548795e-05!GO:0006084;acetyl-CoA metabolic process;2.15087211155376e-05!GO:0008270;zinc ion binding;2.15627818325861e-05!GO:0016469;proton-transporting two-sector ATPase complex;2.22656540743505e-05!GO:0046034;ATP metabolic process;2.43585520309712e-05!GO:0031988;membrane-bound vesicle;2.61314894516766e-05!GO:0044452;nucleolar part;2.69050383680167e-05!GO:0003678;DNA helicase activity;2.89648171773084e-05!GO:0009056;catabolic process;2.99463536428936e-05!GO:0007059;chromosome segregation;3.00978177640397e-05!GO:0006752;group transfer coenzyme metabolic process;3.03704007019433e-05!GO:0016023;cytoplasmic membrane-bound vesicle;3.23449262709149e-05!GO:0006754;ATP biosynthetic process;3.31353197768257e-05!GO:0006753;nucleoside phosphate metabolic process;3.31353197768257e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;3.33810249587968e-05!GO:0008186;RNA-dependent ATPase activity;3.88751878100817e-05!GO:0003702;RNA polymerase II transcription factor activity;3.97075275848786e-05!GO:0006310;DNA recombination;4.61817016257249e-05!GO:0003684;damaged DNA binding;4.81441710770635e-05!GO:0009108;coenzyme biosynthetic process;4.99526874784537e-05!GO:0043021;ribonucleoprotein binding;5.31621315011213e-05!GO:0048523;negative regulation of cellular process;5.33229913930433e-05!GO:0015078;hydrogen ion transmembrane transporter activity;5.56280794283756e-05!GO:0004674;protein serine/threonine kinase activity;7.07972039016277e-05!GO:0048475;coated membrane;7.94228194784997e-05!GO:0030117;membrane coat;7.94228194784997e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;8.54031830267022e-05!GO:0008168;methyltransferase activity;8.74370323085519e-05!GO:0016741;transferase activity, transferring one-carbon groups;8.74370323085519e-05!GO:0000059;protein import into nucleus, docking;8.74370323085519e-05!GO:0006352;transcription initiation;8.76133773543394e-05!GO:0000079;regulation of cyclin-dependent protein kinase activity;9.2505926210752e-05!GO:0008654;phospholipid biosynthetic process;9.2505926210752e-05!GO:0031982;vesicle;9.38050342959783e-05!GO:0009109;coenzyme catabolic process;9.45524587218451e-05!GO:0006414;translational elongation;9.57654303581197e-05!GO:0006793;phosphorus metabolic process;0.000101141908618998!GO:0006796;phosphate metabolic process;0.000101141908618998!GO:0016859;cis-trans isomerase activity;0.000108235526914428!GO:0006402;mRNA catabolic process;0.000109419372413948!GO:0005762;mitochondrial large ribosomal subunit;0.000115943530476727!GO:0000315;organellar large ribosomal subunit;0.000115943530476727!GO:0004004;ATP-dependent RNA helicase activity;0.000125772476427142!GO:0031410;cytoplasmic vesicle;0.000126890173306496!GO:0006888;ER to Golgi vesicle-mediated transport;0.000141409097130102!GO:0007052;mitotic spindle organization and biogenesis;0.000144023888419884!GO:0007050;cell cycle arrest;0.000149346513644704!GO:0006338;chromatin remodeling;0.000152473983610173!GO:0009117;nucleotide metabolic process;0.000154825924710801!GO:0005048;signal sequence binding;0.000161960971217516!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000187240219881175!GO:0051246;regulation of protein metabolic process;0.000212344969897026!GO:0007088;regulation of mitosis;0.000216719936990597!GO:0000049;tRNA binding;0.000217752299139174!GO:0016310;phosphorylation;0.000239889699501181!GO:0051087;chaperone binding;0.000261792745781746!GO:0005876;spindle microtubule;0.000269228567583558!GO:0000922;spindle pole;0.000270039581345413!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000283349484534103!GO:0044431;Golgi apparatus part;0.000288782956647384!GO:0008033;tRNA processing;0.000303786985418589!GO:0007093;mitotic cell cycle checkpoint;0.000358537750302119!GO:0043681;protein import into mitochondrion;0.000381141943269124!GO:0045454;cell redox homeostasis;0.000407820224677857!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000419757973444531!GO:0006401;RNA catabolic process;0.000430640829973996!GO:0051052;regulation of DNA metabolic process;0.000478436048754419!GO:0048471;perinuclear region of cytoplasm;0.00050607333492306!GO:0051187;cofactor catabolic process;0.000517916443468049!GO:0006839;mitochondrial transport;0.000517916443468049!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.000560770750094605!GO:0016251;general RNA polymerase II transcription factor activity;0.000562459596020554!GO:0005768;endosome;0.000637273012729342!GO:0008017;microtubule binding;0.000646571433061662!GO:0044440;endosomal part;0.000648073463783208!GO:0010008;endosome membrane;0.000648073463783208!GO:0046914;transition metal ion binding;0.000649858420771117!GO:0045892;negative regulation of transcription, DNA-dependent;0.000660466172825699!GO:0051539;4 iron, 4 sulfur cluster binding;0.000680471646162239!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000693028133823638!GO:0032259;methylation;0.000702454652458002!GO:0006612;protein targeting to membrane;0.000720262976673023!GO:0030880;RNA polymerase complex;0.00075951146229954!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000791741927587635!GO:0000314;organellar small ribosomal subunit;0.000791741927587635!GO:0005763;mitochondrial small ribosomal subunit;0.000791741927587635!GO:0032508;DNA duplex unwinding;0.000793921017115309!GO:0032392;DNA geometric change;0.000793921017115309!GO:0007010;cytoskeleton organization and biogenesis;0.000797502182299909!GO:0019843;rRNA binding;0.000829892301331055!GO:0003711;transcription elongation regulator activity;0.00087297533814634!GO:0008250;oligosaccharyl transferase complex;0.000875820762128869!GO:0006405;RNA export from nucleus;0.000882356382093376!GO:0032200;telomere organization and biogenesis;0.000950164435723797!GO:0000723;telomere maintenance;0.000950164435723797!GO:0008276;protein methyltransferase activity;0.000972688783612708!GO:0006626;protein targeting to mitochondrion;0.00099517803245372!GO:0004576;oligosaccharyl transferase activity;0.00101099334012174!GO:0008139;nuclear localization sequence binding;0.00101398029089788!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00102492608768441!GO:0030518;steroid hormone receptor signaling pathway;0.00104304185280233!GO:0035258;steroid hormone receptor binding;0.00110147578907225!GO:0030867;rough endoplasmic reticulum membrane;0.00116643315100427!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00118339851472487!GO:0012501;programmed cell death;0.00122393473073949!GO:0051252;regulation of RNA metabolic process;0.00123207354932191!GO:0045045;secretory pathway;0.00128220297598126!GO:0006270;DNA replication initiation;0.00128220297598126!GO:0004527;exonuclease activity;0.00133966744285536!GO:0015980;energy derivation by oxidation of organic compounds;0.00133966744285536!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00138015732499375!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00138015732499375!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00138015732499375!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00138015732499375!GO:0000428;DNA-directed RNA polymerase complex;0.00138015732499375!GO:0005798;Golgi-associated vesicle;0.00141956790978743!GO:0030521;androgen receptor signaling pathway;0.00143469303673546!GO:0019783;small conjugating protein-specific protease activity;0.00143593718986786!GO:0007006;mitochondrial membrane organization and biogenesis;0.00143744485981857!GO:0006915;apoptosis;0.00144392666063745!GO:0046489;phosphoinositide biosynthetic process;0.0015030393022195!GO:0016790;thiolester hydrolase activity;0.00156753479695358!GO:0004221;ubiquitin thiolesterase activity;0.0016118829318366!GO:0048519;negative regulation of biological process;0.00162622720775191!GO:0043414;biopolymer methylation;0.00170326249272273!GO:0000082;G1/S transition of mitotic cell cycle;0.00170995503347532!GO:0004843;ubiquitin-specific protease activity;0.00170995503347532!GO:0008022;protein C-terminus binding;0.00170995503347532!GO:0030120;vesicle coat;0.0017103310691452!GO:0030662;coated vesicle membrane;0.0017103310691452!GO:0003746;translation elongation factor activity;0.00173430640187703!GO:0051920;peroxiredoxin activity;0.00188579428017674!GO:0019899;enzyme binding;0.00188769113305913!GO:0006289;nucleotide-excision repair;0.00192062029873003!GO:0005637;nuclear inner membrane;0.00194064068337642!GO:0006268;DNA unwinding during replication;0.00199458814276819!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00203985865313358!GO:0005684;U2-dependent spliceosome;0.00204961309204848!GO:0003756;protein disulfide isomerase activity;0.00210053676620822!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.00210053676620822!GO:0009112;nucleobase metabolic process;0.00220924806774424!GO:0003924;GTPase activity;0.00225009730472081!GO:0000139;Golgi membrane;0.00229158123039142!GO:0048500;signal recognition particle;0.00239691894554605!GO:0000096;sulfur amino acid metabolic process;0.00248588977964007!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00248756766810357!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00248756766810357!GO:0031124;mRNA 3'-end processing;0.00249148960073859!GO:0006607;NLS-bearing substrate import into nucleus;0.00261865830284591!GO:0006611;protein export from nucleus;0.00270336008609095!GO:0016407;acetyltransferase activity;0.00273178463500983!GO:0004003;ATP-dependent DNA helicase activity;0.00290503773955243!GO:0007004;telomere maintenance via telomerase;0.00291771502296269!GO:0031072;heat shock protein binding;0.00294471773746973!GO:0018196;peptidyl-asparagine modification;0.00297537351754811!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00297537351754811!GO:0000339;RNA cap binding;0.00308898931851252!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00321932670137516!GO:0006730;one-carbon compound metabolic process;0.00325080196133492!GO:0008652;amino acid biosynthetic process;0.00336579117926557!GO:0008312;7S RNA binding;0.00345042150195221!GO:0045947;negative regulation of translational initiation;0.00356401976865548!GO:0000792;heterochromatin;0.0036407092952609!GO:0051540;metal cluster binding;0.00366047840231692!GO:0051536;iron-sulfur cluster binding;0.00366047840231692!GO:0046474;glycerophospholipid biosynthetic process;0.00367751628014787!GO:0046467;membrane lipid biosynthetic process;0.00377406531873389!GO:0000228;nuclear chromosome;0.00379086910560017!GO:0046966;thyroid hormone receptor binding;0.00382861107278473!GO:0006891;intra-Golgi vesicle-mediated transport;0.00382885122756417!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00412465734166167!GO:0006284;base-excision repair;0.00413231984760525!GO:0005770;late endosome;0.00424098886221222!GO:0005839;proteasome core complex (sensu Eukaryota);0.00430874272176445!GO:0008219;cell death;0.0043233517773508!GO:0016265;death;0.0043233517773508!GO:0000786;nucleosome;0.00438740075543887!GO:0006144;purine base metabolic process;0.00474998970023077!GO:0047485;protein N-terminus binding;0.00480115164037004!GO:0030384;phosphoinositide metabolic process;0.00483646831552354!GO:0005669;transcription factor TFIID complex;0.00489193136727991!GO:0009116;nucleoside metabolic process;0.00496496546062951!GO:0043284;biopolymer biosynthetic process;0.00505783243782918!GO:0016584;nucleosome positioning;0.0052284076840516!GO:0009165;nucleotide biosynthetic process;0.00535719391354917!GO:0000781;chromosome, telomeric region;0.00543092751617706!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0056014778455766!GO:0030522;intracellular receptor-mediated signaling pathway;0.00567055143654683!GO:0007021;tubulin folding;0.00617686711964178!GO:0009451;RNA modification;0.00628668794371459!GO:0048487;beta-tubulin binding;0.00628668794371459!GO:0005769;early endosome;0.00640795438367204!GO:0000725;recombinational repair;0.00646870085134884!GO:0000724;double-strand break repair via homologous recombination;0.00646870085134884!GO:0031123;RNA 3'-end processing;0.00656586841245634!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00672685593373539!GO:0015399;primary active transmembrane transporter activity;0.00672685593373539!GO:0044450;microtubule organizing center part;0.00681658909393536!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00682121180928648!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00682489272315833!GO:0045047;protein targeting to ER;0.00682489272315833!GO:0046112;nucleobase biosynthetic process;0.00702765404577759!GO:0006278;RNA-dependent DNA replication;0.00703737705258653!GO:0006376;mRNA splice site selection;0.00707723114870044!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00707723114870044!GO:0009303;rRNA transcription;0.00720629864757261!GO:0006378;mRNA polyadenylation;0.00749936236942067!GO:0000819;sister chromatid segregation;0.00762871961358356!GO:0006520;amino acid metabolic process;0.00796344584893104!GO:0042393;histone binding;0.00801672036189641!GO:0031570;DNA integrity checkpoint;0.00819565376879699!GO:0005832;chaperonin-containing T-complex;0.00848549246403266!GO:0004518;nuclease activity;0.00887125408419626!GO:0042054;histone methyltransferase activity;0.00898354715221157!GO:0043022;ribosome binding;0.00905717277074572!GO:0043488;regulation of mRNA stability;0.00967705473656188!GO:0043487;regulation of RNA stability;0.00967705473656188!GO:0006595;polyamine metabolic process;0.00967705473656188!GO:0000070;mitotic sister chromatid segregation;0.00974970337835101!GO:0031536;positive regulation of exit from mitosis;0.0097842841868204!GO:0006400;tRNA modification;0.00995363466380972!GO:0000287;magnesium ion binding;0.0100107385474238!GO:0000209;protein polyubiquitination;0.0102498265408808!GO:0000097;sulfur amino acid biosynthetic process;0.0102849675306909!GO:0016272;prefoldin complex;0.0104353582879674!GO:0033116;ER-Golgi intermediate compartment membrane;0.0105020407100109!GO:0042770;DNA damage response, signal transduction;0.0106196376571175!GO:0051098;regulation of binding;0.0108342781568485!GO:0043596;nuclear replication fork;0.0117522309219996!GO:0000178;exosome (RNase complex);0.0117696072354385!GO:0051789;response to protein stimulus;0.0120316770850445!GO:0006986;response to unfolded protein;0.0120316770850445!GO:0004298;threonine endopeptidase activity;0.0121884759812272!GO:0005875;microtubule associated complex;0.0123644120482402!GO:0030137;COPI-coated vesicle;0.012417935621838!GO:0045941;positive regulation of transcription;0.0125990129358704!GO:0045893;positive regulation of transcription, DNA-dependent;0.012914063879507!GO:0031369;translation initiation factor binding;0.012914063879507!GO:0005741;mitochondrial outer membrane;0.0131618171073266!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0131618171073266!GO:0005905;coated pit;0.0135966881519951!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0137678094769002!GO:0005525;GTP binding;0.0145616760020727!GO:0008190;eukaryotic initiation factor 4E binding;0.0147070959576885!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0148506509774744!GO:0015002;heme-copper terminal oxidase activity;0.0148506509774744!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0148506509774744!GO:0004129;cytochrome-c oxidase activity;0.0148506509774744!GO:0046483;heterocycle metabolic process;0.0152942405790963!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0154534595666971!GO:0006541;glutamine metabolic process;0.0156326498223858!GO:0016279;protein-lysine N-methyltransferase activity;0.0163963418206156!GO:0018024;histone-lysine N-methyltransferase activity;0.0163963418206156!GO:0016278;lysine N-methyltransferase activity;0.0163963418206156!GO:0005869;dynactin complex;0.0166283646118891!GO:0030176;integral to endoplasmic reticulum membrane;0.0166303051565572!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.016681014765934!GO:0042809;vitamin D receptor binding;0.0171164235051806!GO:0005844;polysome;0.0174585963321614!GO:0006506;GPI anchor biosynthetic process;0.0180052566968775!GO:0043624;cellular protein complex disassembly;0.0184788783502201!GO:0006505;GPI anchor metabolic process;0.0184801155143895!GO:0016585;chromatin remodeling complex;0.0190659412744643!GO:0046128;purine ribonucleoside metabolic process;0.01965902466424!GO:0042278;purine nucleoside metabolic process;0.01965902466424!GO:0042802;identical protein binding;0.0198536901930533!GO:0031968;organelle outer membrane;0.0199434569315321!GO:0000152;nuclear ubiquitin ligase complex;0.0202401021571782!GO:0031577;spindle checkpoint;0.0203495999031383!GO:0065009;regulation of a molecular function;0.0203809569775473!GO:0005663;DNA replication factor C complex;0.0204496828407616!GO:0006275;regulation of DNA replication;0.0205653875137438!GO:0008097;5S rRNA binding;0.020567714854201!GO:0045792;negative regulation of cell size;0.0206086465181081!GO:0006497;protein amino acid lipidation;0.020624003879936!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0206883988387794!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0207391414692814!GO:0040029;regulation of gene expression, epigenetic;0.0211095207084856!GO:0019867;outer membrane;0.021221177455419!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0213080365893252!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0214753160225804!GO:0000910;cytokinesis;0.0215186739821351!GO:0004402;histone acetyltransferase activity;0.0220619316996146!GO:0004468;lysine N-acetyltransferase activity;0.0220619316996146!GO:0051287;NAD binding;0.0228484358253909!GO:0000726;non-recombinational repair;0.0228484358253909!GO:0031252;leading edge;0.0228992372467021!GO:0006650;glycerophospholipid metabolic process;0.0233369392040542!GO:0008180;signalosome;0.0235062846444539!GO:0043130;ubiquitin binding;0.0240511107078282!GO:0032182;small conjugating protein binding;0.0240511107078282!GO:0032039;integrator complex;0.0243262715779773!GO:0000123;histone acetyltransferase complex;0.0245174447454896!GO:0050681;androgen receptor binding;0.0245674602889337!GO:0030308;negative regulation of cell growth;0.0247407416510052!GO:0030134;ER to Golgi transport vesicle;0.0247636028086246!GO:0016579;protein deubiquitination;0.0260466617129146!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0263073292824532!GO:0045815;positive regulation of gene expression, epigenetic;0.0263073292824532!GO:0000086;G2/M transition of mitotic cell cycle;0.026345111868321!GO:0006916;anti-apoptosis;0.0265280943553628!GO:0030118;clathrin coat;0.026817504578174!GO:0004523;ribonuclease H activity;0.027351412314091!GO:0000077;DNA damage checkpoint;0.0275647828740837!GO:0043631;RNA polyadenylation;0.0282884245177784!GO:0032561;guanyl ribonucleotide binding;0.0286946778612382!GO:0019001;guanyl nucleotide binding;0.0286946778612382!GO:0008092;cytoskeletal protein binding;0.0297888672607132!GO:0006354;RNA elongation;0.0297888672607132!GO:0005784;translocon complex;0.0310910632221859!GO:0030145;manganese ion binding;0.0311725496594628!GO:0004748;ribonucleoside-diphosphate reductase activity;0.0327693835338952!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.0327693835338952!GO:0043601;nuclear replisome;0.033050701090394!GO:0030894;replisome;0.033050701090394!GO:0006220;pyrimidine nucleotide metabolic process;0.0335062532073613!GO:0005487;nucleocytoplasmic transporter activity;0.033525702619158!GO:0005665;DNA-directed RNA polymerase II, core complex;0.033525702619158!GO:0030027;lamellipodium;0.0336609033611722!GO:0051297;centrosome organization and biogenesis;0.0336609033611722!GO:0031023;microtubule organizing center organization and biogenesis;0.0336609033611722!GO:0016301;kinase activity;0.03382692356942!GO:0050811;GABA receptor binding;0.0339160336516713!GO:0009113;purine base biosynthetic process;0.0342116719715213!GO:0032507;maintenance of cellular protein localization;0.0345984813255261!GO:0005652;nuclear lamina;0.0347514031127568!GO:0043492;ATPase activity, coupled to movement of substances;0.0349684079057287!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0352262247246238!GO:0008143;poly(A) binding;0.035434370529676!GO:0035267;NuA4 histone acetyltransferase complex;0.035728928412539!GO:0007096;regulation of exit from mitosis;0.0361256315846932!GO:0010458;exit from mitosis;0.0361256315846932!GO:0031625;ubiquitin protein ligase binding;0.0369522134512736!GO:0043069;negative regulation of programmed cell death;0.0370374044793743!GO:0032984;macromolecular complex disassembly;0.0370681284327075!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0378294959186384!GO:0030663;COPI coated vesicle membrane;0.0379155457297206!GO:0030126;COPI vesicle coat;0.0379155457297206!GO:0012506;vesicle membrane;0.0380004490393549!GO:0044433;cytoplasmic vesicle part;0.0388455256724846!GO:0046983;protein dimerization activity;0.0392799218370775!GO:0003887;DNA-directed DNA polymerase activity;0.0392799218370775!GO:0008287;protein serine/threonine phosphatase complex;0.0399011393133718!GO:0051059;NF-kappaB binding;0.0404829935671641!GO:0031970;organelle envelope lumen;0.0407476236030101!GO:0005791;rough endoplasmic reticulum;0.0407901378051361!GO:0003923;GPI-anchor transamidase activity;0.0409348800523058!GO:0016255;attachment of GPI anchor to protein;0.0409348800523058!GO:0042765;GPI-anchor transamidase complex;0.0409348800523058!GO:0043066;negative regulation of apoptosis;0.0412964697694107!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0420002966604694!GO:0004815;aspartate-tRNA ligase activity;0.0425874307054586!GO:0006422;aspartyl-tRNA aminoacylation;0.0425874307054586!GO:0006360;transcription from RNA polymerase I promoter;0.0427343029368805!GO:0042706;eye photoreceptor cell fate commitment;0.0427411214310931!GO:0046552;photoreceptor cell fate commitment;0.0427411214310931!GO:0009081;branched chain family amino acid metabolic process;0.0432227938154034!GO:0000118;histone deacetylase complex;0.0433563671069671!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0438145255710915!GO:0006406;mRNA export from nucleus;0.0438591002687606!GO:0004532;exoribonuclease activity;0.0438820796312237!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0438820796312237!GO:0007018;microtubule-based movement;0.0441918208008797!GO:0009067;aspartate family amino acid biosynthetic process;0.0443460132295838!GO:0006301;postreplication repair;0.0443852602782586!GO:0042158;lipoprotein biosynthetic process;0.0444903480307365!GO:0005680;anaphase-promoting complex;0.0452940056600228!GO:0003725;double-stranded RNA binding;0.0456001555018265!GO:0006415;translational termination;0.0456001555018265!GO:0043241;protein complex disassembly;0.0459701823597014!GO:0000119;mediator complex;0.0466226050196855!GO:0050662;coenzyme binding;0.0468806825615579!GO:0009124;nucleoside monophosphate biosynthetic process;0.0469990827348738!GO:0009123;nucleoside monophosphate metabolic process;0.0469990827348738!GO:0045926;negative regulation of growth;0.047049414945214!GO:0005885;Arp2/3 protein complex;0.0473223667244636!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0478531586460209!GO:0010257;NADH dehydrogenase complex assembly;0.0478531586460209!GO:0033108;mitochondrial respiratory chain complex assembly;0.0478531586460209!GO:0008080;N-acetyltransferase activity;0.0478531586460209!GO:0004239;methionyl aminopeptidase activity;0.0484332992680541!GO:0046982;protein heterodimerization activity;0.0485095798854631!GO:0008213;protein amino acid alkylation;0.0494082911824945!GO:0006479;protein amino acid methylation;0.0494082911824945!GO:0022890;inorganic cation transmembrane transporter activity;0.0494806957128617
|sample_id=10838
|sample_note=
|sample_sex=male
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=brain
|top_motifs=CRX:3.89411254545;HOX{A6,A7,B6,B7}:2.68923477091;TOPORS:2.26225138659;CDX1,2,4:2.25861044008;ADNP_IRX_SIX_ZHX:2.21370455949;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:2.14898089447;PITX1..3:2.14329702707;LHX3,4:2.10289105939;POU1F1:2.05308904069;BREu{core}:2.00261718331;TFDP1:1.9952104764;FOX{I1,J2}:1.68448098589;E2F1..5:1.65421308718;NANOG:1.64366777861;AHR_ARNT_ARNT2:1.64320420305;NFY{A,B,C}:1.62512883576;bHLH_family:1.57431620853;ZNF143:1.53180533514;YY1:1.47556551787;ZBTB16:1.42265743862;FOXM1:1.40666831641;VSX1,2:1.33792691124;ARID5B:1.31495230201;POU6F1:1.28412449231;IKZF2:1.27117234269;HIF1A:1.24025655951;NRF1:1.18651167492;TEF:1.18065830012;PRRX1,2:1.16769304883;AIRE:1.1496470568;PDX1:1.12963232349;PAX3,7:1.12169099681;ZNF384:1.11958634397;FOXP1:1.11896989519;NKX2-3_NKX2-5:1.09530089262;ZFP161:1.09281343629;PAX4:1.04572460979;NKX2-2,8:1.02470817188;BPTF:1.02002646954;ZIC1..3:1.00790816923;RREB1:0.973499515791;GATA4:0.964793961918;EVI1:0.941426490741;PBX1:0.904851240696;PATZ1:0.872871948206;GFI1:0.843380126814;MYB:0.840214374669;MED-1{core}:0.835947152614;MZF1:0.798706528671;SOX{8,9,10}:0.797187835286;ATF4:0.779053533108;RBPJ:0.749323443391;TAL1_TCF{3,4,12}:0.645931836261;POU2F1..3:0.638856669925;ELK1,4_GABP{A,B1}:0.628077948067;FOXD3:0.623002390645;PAX8:0.605708308076;NKX2-1,4:0.601328121216;NKX6-1,2:0.594351423585;TFAP2B:0.580258391417;MYBL2:0.574005425043;FOXN1:0.560196586357;NR6A1:0.552700223819;TLX1..3_NFIC{dimer}:0.551138615493;PAX6:0.533078070295;HMGA1,2:0.452785637659;SOX17:0.431199461324;STAT5{A,B}:0.417533225912;HSF1,2:0.415674317387;UFEwm:0.360569153201;OCT4_SOX2{dimer}:0.354520081587;MYOD1:0.340278109913;RFX1:0.325271968403;RFX2..5_RFXANK_RFXAP:0.299511290001;POU5F1:0.289054033669;KLF4:0.250529672203;TGIF1:0.242198793823;ATF5_CREB3:0.237747553483;MAZ:0.236719526255;PAX5:0.228977426631;CREB1:0.210323355763;GTF2I:0.206679609969;SOX5:0.182780445816;GTF2A1,2:0.180636637563;RXR{A,B,G}:0.169552679734;CDC5L:0.146828996827;SP1:0.134961038921;HOXA9_MEIS1:0.123612368989;TFAP2{A,C}:0.117886059622;HIC1:0.115100373885;T:0.0971767045507;FOXO1,3,4:0.0620806206364;CUX2:0.058630664536;GFI1B:0.0405514343814;FOXP3:0.0387954977942;ZNF423:0.0362550890003;NFIL3:0.00166235105085;MEF2{A,B,C,D}:-0.00158243413551;STAT1,3:-0.0310833902958;SOX2:-0.0363076330851;GATA6:-0.0409591765115;MTE{core}:-0.0578974708418;ALX1:-0.0671942330283;RORA:-0.067459707901;PAX1,9:-0.103995064563;NHLH1,2:-0.106337348207;HOX{A5,B5}:-0.10873780956;EGR1..3:-0.112822564048;TP53:-0.125568225033;ALX4:-0.128610045013;FOXA2:-0.152013158857;ZBTB6:-0.158823726635;REST:-0.169472980165;HNF1A:-0.18631398644;LEF1_TCF7_TCF7L1,2:-0.204388815078;GZF1:-0.211551373024;ONECUT1,2:-0.222791119539;NKX3-1:-0.224498331872;POU3F1..4:-0.230202184041;FOX{F1,F2,J1}:-0.244803808042;HNF4A_NR2F1,2:-0.284665694493;NKX3-2:-0.287160575375;XCPE1{core}:-0.291604400877;JUN:-0.30701841092;AR:-0.315469495727;FOXQ1:-0.334816632536;PAX2:-0.360480760763;FOXL1:-0.385735646228;LMO2:-0.396931661153;HAND1,2:-0.401660648287;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.406418732509;SNAI1..3:-0.428056337803;CEBPA,B_DDIT3:-0.440411011762;MYFfamily:-0.44631360484;ZEB1:-0.470246718653;NFKB1_REL_RELA:-0.480731832735;IKZF1:-0.485881708477;PRDM1:-0.496062188673;TEAD1:-0.530995257023;NR1H4:-0.540249968238;HOX{A4,D4}:-0.540411930912;EN1,2:-0.556094819554;EP300:-0.571061391999;FOX{D1,D2}:-0.582611199585;TBP:-0.622212806404;HES1:-0.627756710815;TBX4,5:-0.658285986619;ATF2:-0.661391563138;HLF:-0.691349200816;NFE2:-0.723325240946;IRF7:-0.741727893526;NR5A1,2:-0.768156167253;DBP:-0.783031102336;SPIB:-0.799535925415;SPI1:-0.804845826529;XBP1:-0.805620975348;ESRRA:-0.80640584513;FOSL2:-0.807847114718;MTF1:-0.844166677221;BACH2:-0.848709188319;FOS_FOS{B,L1}_JUN{B,D}:-0.859318617575;NFE2L2:-0.882605049622;DMAP1_NCOR{1,2}_SMARC:-0.889137355071;HBP1_HMGB_SSRP1_UBTF:-0.88965212655;PPARG:-0.893996166414;RUNX1..3:-0.913947146294;SMAD1..7,9:-0.947245878004;ELF1,2,4:-1.00606556001;NFE2L1:-1.0061438554;NR3C1:-1.01294581497;SPZ1:-1.01611456501;GCM1,2:-1.23462219021;GLI1..3:-1.23562670048;SREBF1,2:-1.2718590306;RXRA_VDR{dimer}:-1.28469896906;SRF:-1.30714716139;IRF1,2:-1.32331825843;ETS1,2:-1.40298331698;NFIX:-1.49883005999;HMX1:-1.52929682334;MAFB:-1.53373402198;NFATC1..3:-1.55716745083;ATF6:-1.57118336089;ZNF238:-1.57174275827;EBF1:-1.65623740507;NANOG{mouse}:-1.65992963252;ESR1:-1.72333673117;TFAP4:-1.73056626625;TLX2:-1.75662504092;ZNF148:-1.83424918951;TFCP2:-2.01833052776;STAT2,4,6:-2.03091061632
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10838-111E1;search_select_hide=table117:FF:10838-111E1
}}
}}

Latest revision as of 15:08, 3 June 2020

Name:medulloblastoma cell line:D283 Med
Species:Human (Homo sapiens)
Library ID:CNhs12805
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuebrain
dev stageNA
sexmale
age6
cell typeneurectodermal cell
cell lineD283 Med
companyATCC
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004791
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12805 CAGE DRX007928 DRR008800
Accession ID Hg19

Library idBAMCTSS
CNhs12805 DRZ000225 DRZ001610
Accession ID Hg38

Library idBAMCTSS
CNhs12805 DRZ011575 DRZ012960
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
RNA-Seq  SAMD00004791
Library accession numbers

Library idMethodExp. accession idRun accession id
RDhi10089 RNA-Seq DRX057146 DRR062905
Accession ID Hg19

Library idBAMCTSS
RDhi10089 DRZ007981


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.353
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.63
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.0563
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.0563
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.137
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.311
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.214
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.232
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.151
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.454
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0.228
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.0563
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.0563
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0.0563
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.556
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.0796
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary1
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0.0563
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12805

Jaspar motifP-value
MA0002.21.66458e-6
MA0003.10.162
MA0004.10.299
MA0006.10.149
MA0007.10.162
MA0009.10.939
MA0014.10.946
MA0017.10.00109
MA0018.20.151
MA0019.10.718
MA0024.11.12948e-4
MA0025.10.811
MA0027.10.92
MA0028.10.523
MA0029.10.853
MA0030.10.704
MA0031.10.236
MA0035.20.272
MA0038.10.121
MA0039.20.362
MA0040.10.245
MA0041.10.169
MA0042.10.482
MA0043.10.196
MA0046.10.0878
MA0047.20.118
MA0048.10.169
MA0050.16.86234e-9
MA0051.11.63775e-4
MA0052.10.153
MA0055.10.302
MA0057.10.328
MA0058.10.255
MA0059.10.252
MA0060.13.9535e-7
MA0061.10.0236
MA0062.20.587
MA0065.20.00451
MA0066.10.0559
MA0067.10.959
MA0068.10.468
MA0069.10.907
MA0070.10.409
MA0071.10.571
MA0072.10.513
MA0073.10.975
MA0074.10.344
MA0076.10.338
MA0077.10.514
MA0078.10.46
MA0079.20.561
MA0080.21.02948e-11
MA0081.10.0904
MA0083.10.00172
MA0084.10.969
MA0087.10.183
MA0088.10.696
MA0090.10.0359
MA0091.10.606
MA0092.10.28
MA0093.10.248
MA0099.21.05399e-20
MA0100.10.56
MA0101.10.0628
MA0102.20.161
MA0103.10.307
MA0104.20.0185
MA0105.10.0381
MA0106.10.712
MA0107.10.0204
MA0108.20.4
MA0111.10.984
MA0112.24.91879e-4
MA0113.10.306
MA0114.10.0272
MA0115.10.798
MA0116.10.0616
MA0117.10.915
MA0119.10.95
MA0122.10.756
MA0124.10.637
MA0125.10.541
MA0131.10.327
MA0135.10.794
MA0136.12.64847e-11
MA0137.28.84362e-4
MA0138.20.148
MA0139.10.688
MA0140.10.324
MA0141.10.0854
MA0142.10.937
MA0143.10.348
MA0144.15.51371e-4
MA0145.10.0307
MA0146.10.0361
MA0147.10.0155
MA0148.10.0666
MA0149.10.0786
MA0150.11.26197e-4
MA0152.10.814
MA0153.10.212
MA0154.10.0347
MA0155.10.264
MA0156.11.28292e-7
MA0157.10.0311
MA0159.10.00456
MA0160.10.0497
MA0162.10.235
MA0163.10.013
MA0164.10.597
MA0258.10.041
MA0259.10.103



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12805

Novel motifP-value
10.22
100.207
1000.8
1010.722
1020.969
1030.0324
1040.446
1050.0502
1060.0127
1070.0783
1080.846
1090.0586
110.0994
1100.399
1110.271
1120.223
1130.451
1140.0148
1150.602
1160.675
1170.322
1180.788
1190.378
120.838
1200.353
1210.816
1220.513
1230.893
1240.149
1250.956
1260.534
1270.336
1280.0387
1290.333
130.855
1300.713
1310.42
1320.448
1330.0397
1340.292
1350.00813
1360.659
1370.129
1380.195
1390.0133
140.529
1400.353
1410.965
1420.67
1430.00129
1440.966
1450.414
1460.289
1470.845
1480.0759
1490.0526
150.17
1500.462
1510.134
1520.0226
1530.98
1540.823
1550.909
1560.458
1570.257
1580.884
1590.0789
160.195
1600.508
1610.0918
1620.659
1630.696
1640.516
1650.151
1660.895
1670.587
1680.231
1690.0068
170.295
180.263
190.12
20.103
200.53
210.891
220.153
230.00965
240.563
250.315
260.222
270.0646
280.905
290.41
30.19
300.402
310.329
320.0145
330.435
340.239
350.997
360.199
370.17
380.242
390.326
40.755
400.244
410.0595
420.443
430.135
440.554
450.307
460.208
470.386
480.277
490.213
50.158
500.562
510.243
520.329
530.636
540.283
550.143
560.33
570.878
580.245
590.0302
60.943
600.0554
610.407
620.105
630.196
640.478
650.0518
660.91
670.966
680.495
690.507
70.473
700.0235
710.103
720.0463
730.0216
740.326
750.226
760.885
770.0547
780.737
790.0572
80.291
800.0184
810.53
820.0321
830.792
840.207
850.0467
860.659
870.177
880.918
890.0845
90.0933
900.814
910.257
920.0443
930.801
940.106
950.315
960.224
970.436
980.114
990.58



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12805


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0002319 (neural cell)
0000095 (neuron associated cell)
0000243 (glial cell (sensu Vertebrata))
0000125 (glial cell)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
3093 (nervous system cancer)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000955 (brain)
0004121 (ectoderm-derived structure)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100711 (glioma cell line sample)
0100255 (brain cell line sample)
0100690 (brain cancer cell line sample)
0101531 (glial cell line sample)
0101359 (medulloblastoma cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000339 (glioblast (sensu Vertebrata))
CL:0000221 (ectodermal cell)
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0006238 (future brain)
UBERON:0010316 (germ layer / neural crest)

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