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{{f5samples
{{f5samples
|id=FF:11838-124H2
|DRA_sample_Accession=CAGE@SAMD00005617
|name=mesenchymal precursor cell - ovarian cancer metastasis, donor4
|accession_numbers=CAGE;DRX008562;DRR009434;DRZ000859;DRZ002244;DRZ012209;DRZ013594
|sample_id=11838
|ancestors_in_anatomy_facet=UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062
|rna_tube_id=124H2
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034
|rna_box=124
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:193,DOID:2394,DOID:120
|rna_position=H2
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000272,FF:0000274
|sample_cell_lot=SOC-43-meta
|comment=
|sample_cell_catalog=
|created_by=
|sample_company=
|creation_date=
|rna_lot_number=
|data_phase=2
|rna_catalog_number=
|datafreeze_phase=2
|sample_species=Human (Homo sapiens)
|def=
|sample_strain=
|expression_enrichment_score=chr11:61520075..61520136,+!p1@C11orf9!1.81!129.85!C11orf9;;chr2:19558373..19558392,-!p1@OSR1!1.68!124.14!OSR1;;chr11:65686802..65686818,+!p6@DRAP1!1.48!49.89!DRAP1;;chr18:19749386..19749404,+!p2@GATA6!1.41!35.41!GATA6;;chr18:19749541..19749557,+!p1@GATA6!1.37!69.69!GATA6;;chr4:87857474..87857489,+!p7@AFF1!1.37!38.84!AFF1;;chr3:25470156..25470227,+!p2@RARB!1.37!22.47!RARB;;chr4:174451370..174451387,-!p1@HAND2!1.37!22.47!HAND2;;chr11:32457075..32457095,-!p1@WT1!1.29!18.66!WT1;;chr15:83953397..83953425,-!p1@BNC1!1.25!19.04!BNC1;;chr17:46682321..46682362,-!p1@HOXB6!1.19!14.47!HOXB6;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!1.18!14.09!SEBOX;;chr17:26697304..26697335,-!p1@SEBOX,p1@VTN!1.11!11.80!SEBOX;;chr11:46299199..46299233,+!p1@CREB3L1!1.10!59.79!CREB3L1;;chr1:151032860..151032918,+!p1@MLLT11!1.08!130.62!MLLT11;;chr11:65686732..65686756,+!p2@DRAP1!1.08!47.22!DRAP1;;chr20:6748325..6748352,+!p1@BMP2!1.08!15.99!BMP2;;chr4:174450089..174450153,-!p2@HAND2!1.08!11.04!HAND2;;chr11:46299539..46299620,+!p2@CREB3L1!1.05!17.52!CREB3L1;;chr16:86544113..86544145,+!p1@FOXF1!1.04!12.57!FOXF1;;chr12:8186270..8186292,+!p3@FOXJ2!0.99!8.76!FOXJ2;;chr6:19837592..19837621,+!p1@ID4!0.97!52.17!ID4;;chr3:5021268..5021282,+!p4@BHLHE40!0.97!17.14!BHLHE40;;chr7:1577899..1577943,+!p3@MAFK!0.97!8.38!MAFK;;chr7:27224842..27224872,-!p1@HOXA11!0.95!8.00!HOXA11;;chr2:208030647..208030689,-!p1@KLF7!0.93!65.12!KLF7;;chr17:46688334..46688385,-!p1@HOXB7!0.93!11.04!HOXB7;;chr1:151032739..151032748,+!p6@MLLT11!0.93!9.52!MLLT11;;chr5:92918919..92918942,+!p1@NR2F1!0.92!34.27!NR2F1;;chr12:54402745..54402788,+!p1@HOXC8!0.92!7.24!HOXC8;;chr1:151032922..151032951,+!p2@MLLT11!0.90!11.80!MLLT11;;chr12:26277817..26277863,-!p2@BHLHE41!0.87!8.76!BHLHE41;;chr14:62162258..62162269,+!p2@HIF1A!0.86!63.98!HIF1A;;chr14:62162285..62162296,+!p3@HIF1A!0.85!33.89!HIF1A;;chr8:106330656..106330684,+!p1@ZFPM2!0.85!16.76!ZFPM2;;chr7:27205136..27205164,-!p1@HOXA9!0.85!6.09!HOXA9;;chr10:63809106..63809127,+!p1@ARID5B!0.84!85.30!ARID5B;;chr10:63809077..63809089,+!p5@ARID5B!0.84!13.33!ARID5B;;chr5:72744445..72744466,-!p2@FOXD1!0.84!10.28!FOXD1;;chr10:63809134..63809145,+!p6@ARID5B!0.83!14.09!ARID5B;;chr16:67881588..67881612,-!p2@CENPT!0.83!8.00!CENPT;;chr7:27183263..27183284,-!p2@HOXA5!0.83!5.71!HOXA5;;chr2:46524897..46524911,+!p2@EPAS1!0.82!16.76!EPAS1;;chr5:92919375..92919438,+!p6@NR2F1!0.82!6.09!NR2F1;;chr12:124873357..124873401,-!p1@NCOR2!0.81!68.16!NCOR2;;chr18:19749517..19749531,+!p3@GATA6!0.81!10.28!GATA6;;chr5:72744594..72744609,-!p1@FOXD1!0.80!25.89!FOXD1;;chr17:46622070..46622109,-!p1@HOXB2!0.80!12.57!HOXB2;;chr8:106330696..106330719,+!p2@ZFPM2!0.80!6.85!ZFPM2;;chr1:221052994..221053008,+!p6@HLX!0.80!6.47!HLX;;chr16:31076332..31076388,-!p3@ZNF668!0.80!5.33!ZNF668;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!0.80!5.33!HOXC5;;chr3:25469815..25469866,+!p3@RARB!0.80!5.33!RARB;;chr7:27192185..27192209,-!p1@HOXA3!0.80!5.33!HOXA3;;chr11:65687362..65687436,+!p3@DRAP1!0.79!25.51!DRAP1;;chr14:62203595..62203676,+!p4@HIF1A!0.78!9.90!HIF1A;;chr12:26277956..26277980,-!p1@BHLHE41!0.77!19.04!BHLHE41;;chr11:65687222..65687240,+!p7@DRAP1!0.77!6.47!DRAP1;;chr5:92919100..92919135,+!p3@NR2F1!0.77!6.09!NR2F1;;chr6:134210243..134210257,+!p1@TCF21!0.77!4.95!TCF21;;chr7:27205106..27205134,-!p2@HOXA9!0.77!4.95!HOXA9;;chr2:176969228..176969260,+!p1@HOXD11!0.77!4.95!HOXD11;;chr17:3571863..3571881,-!p1@TAX1BP3!0.76!372.81!TAX1BP3;;chr10:51572408..51572454,+!p3@NCOA4!0.76!30.46!NCOA4;;chr20:48807648..48807671,+!p9@CEBPB!0.76!7.24!CEBPB;;chr5:72743793..72743855,-!p4@FOXD1!0.76!5.71!FOXD1;;chr11:65687243..65687276,+!p8@DRAP1!0.75!6.47!DRAP1;;chr10:8096631..8096660,+!p1@GATA3!0.75!5.71!GATA3;;chr3:25470062..25470084,+!p4@RARB!0.75!4.57!RARB;;chr9:16705069..16705086,-!p3@BNC2!0.75!4.57!BNC2;;chr19:45971246..45971265,+!p1@FOSB!0.74!92.92!FOSB;;chr17:46655704..46655718,-!p2@HOXB4!0.73!6.85!HOXB4;;chr12:80085061..80085119,-!p6@PAWR!0.72!7.24!PAWR;;chr3:178789993..178790049,-!p5@ZMAT3!0.72!6.47!ZMAT3;;chr17:46675420..46675465,-!p3@HOXB6!0.72!4.95!HOXB6;;chr11:46299443..46299459,+!p4@CREB3L1!0.72!4.19!CREB3L1;;chr9:35732514..35732530,+!p5@CREB3!0.71!6.09!CREB3;;chr9:35732647..35732678,+!p2@CREB3!0.70!25.13!CREB3;;chr4:87857491..87857519,+!p10@AFF1!0.70!5.71!AFF1;;chr20:50179368..50179392,-!p2@NFATC2!0.70!5.33!NFATC2;;chr1:37940170..37940190,+!p1@ZC3H12A!0.69!54.46!ZC3H12A;;chr12:66218836..66218888,+!p1@HMGA2!0.69!41.13!HMGA2;;chr7:26191809..26191890,+!p1@NFE2L3!0.69!21.71!NFE2L3;;chr12:66218255..66218304,+!p3@HMGA2!0.69!11.42!HMGA2;;chr15:96869255..96869291,+!p6@NR2F2!0.69!7.62!NR2F2;;chr17:46687959..46688007,-!p2@HOXB7!0.69!5.71!HOXB7;;chr17:46622205..46622218,-!p3@HOXB2!0.69!4.57!HOXB2;;chr1:8938709..8938720,-!p3@ENO1!0.68!211.73!ENO1;;chr7:27153454..27153469,-!p2@HOXA3!0.68!3.81!HOXA3;;chr4:174451350..174451363,-!p3@HAND2!0.68!3.81!HAND2;;chr10:101292684..101292706,+!p1@NKX2-3!0.68!3.81!NKX2-3;;chr12:124873852..124873881,-!p3@NCOR2!0.67!25.51!NCOR2;;chr1:151032782..151032801,+!p4@MLLT11!0.67!8.00!MLLT11;;chr21:36259445..36259519,-!p4@RUNX1!0.66!11.04!RUNX1;;chr15:42749722..42749739,-!p2@ZFP106!0.66!6.85!ZFP106;;chr12:54447599..54447630,+!p3@HOXC4!0.66!4.57!HOXC4;;chr6:34204921..34204939,+!p3@HMGA1!0.65!123.00!HMGA1;;chr11:65687158..65687216,+!p4@DRAP1!0.65!23.23!DRAP1;;chr2:208030488..208030551,-!p3@KLF7!0.65!14.09!KLF7;;chr5:92918894..92918912,+!p2@NR2F1!0.65!12.95!NR2F1;;chr4:87968203..87968221,+!p11@AFF1!0.65!6.09!AFF1;;chr3:25469724..25469773,+!p1@RARB!0.65!5.33!RARB;;chr7:27183291..27183324,-!p1@HOXA5!0.65!3.43!HOXA5;;chr16:86612320..86612394,+!p1@FOXL1!0.65!3.43!FOXL1;;chr17:46659728..46659749,-!p3@HOXB3!0.65!3.43!HOXB3;;chr11:46333934..46333963,+!p5@CREB3L1!0.65!3.43!CREB3L1;;chr17:46126136..46126152,+!p1@NFE2L1!0.64!204.11!NFE2L1;;chr2:145275162..145275202,-!p2@ZEB2!0.64!22.85!ZEB2;;chr3:141087393..141087426,+!p3@ZBTB38!0.63!14.85!ZBTB38;;chr14:62213827..62213853,+!p6@HIF1A!0.63!4.95!HIF1A;;chr6:85473156..85473210,-!p2@TBX18!0.63!4.19!TBX18;;chr12:66218598..66218645,+!p2@HMGA2!0.62!17.14!HMGA2;;chr15:37392724..37392757,-!p1@MEIS2!0.62!17.14!MEIS2;;chr2:46524537..46524553,+!p1@EPAS1!0.61!370.52!EPAS1;;chrX:128657457..128657475,-!p1@SMARCA1!0.61!43.03!SMARCA1;;chr5:92918956..92918969,+!p4@NR2F1!0.61!3.43!NR2F1;;chr7:27170359..27170381,-!p1@HOXA4!0.61!3.05!HOXA4;;chr7:27183191..27183214,-!p4@HOXA5!0.61!3.05!HOXA5;;chr7:27224795..27224840,-!p2@HOXA11!0.61!3.05!HOXA11;;chr12:54447637..54447659,+!p4@HOXC4!0.61!3.05!HOXC4;;chr2:114036488..114036504,-!p1@PAX8!0.61!3.05!PAX8;;chr18:19749353..19749367,+!p4@GATA6!0.61!3.05!GATA6;;chr18:19750951..19750980,+!p10@GATA6!0.61!3.05!GATA6;;chr18:45663490..45663528,-!p2@ZBTB7C!0.61!3.05!ZBTB7C;;chr4:87856191..87856208,+!p2@AFF1!0.60!28.18!AFF1;;chr8:49833948..49833973,-!p2@SNAI2!0.60!22.85!SNAI2;;chr3:150126759..150126784,+!p2@TSC22D2!0.60!15.99!TSC22D2;;chr10:77161533..77161546,-!p2@ZNF503!0.60!14.09!ZNF503;;chr5:139487608..139487663,+!p3@PURA!0.60!7.24!PURA;;chr17:46622114..46622138,-!p4@HOXB2!0.60!4.95!HOXB2;;chr1:158985493..158985535,+!p4@IFI16!0.60!4.95!IFI16;;chr15:37392703..37392717,-!p8@MEIS2!0.60!4.57!MEIS2;;chr4:87856129..87856186,+!p1@AFF1!0.59!49.12!AFF1;;chr14:21566731..21566836,-!p1@ZNF219!0.59!38.08!ZNF219;;chr22:38598086..38598105,+!p1@MAFF!0.59!37.70!MAFF;;chr15:96869114..96869160,+!p11@NR2F2!0.59!4.19!NR2F2;;chr17:46621101..46621143,-!p7@HOXB2!0.59!4.19!HOXB2;;chrX:129244454..129244488,-!p1@ELF4!0.58!24.37!ELF4;;chr11:65667884..65667895,-!p2@FOSL1!0.58!12.95!FOSL1;;chr15:96869222..96869251,+!p18@NR2F2!0.58!3.43!NR2F2;;chr12:53614115..53614154,-!p1@RARG!0.57!17.52!RARG;;chr12:66218378..66218401,+!p6@HMGA2!0.57!4.57!HMGA2;;chr12:26277929..26277955,-!p3@BHLHE41!0.57!4.19!BHLHE41;;chr1:158979872..158979898,+!p3@IFI16!0.56!9.52!IFI16;;chr20:48807456..48807475,+!p3@CEBPB!0.56!5.71!CEBPB;;chr9:16870659..16870675,-!p2@BNC2!0.56!3.43!BNC2;;chr18:53068911..53068935,-!p4@TCF4!0.56!3.05!TCF4;;chr15:96869206..96869220,+!p21@NR2F2!0.56!2.67!NR2F2;;chr9:16728161..16728185,-!p4@BNC2!0.56!2.67!BNC2;;chr1:42801540..42801562,-!p4@FOXJ3!0.56!2.67!FOXJ3;;chr12:54422217..54422239,+!p3@HOXC6!0.56!2.67!HOXC6;;chr5:92920719..92920744,+!p17@NR2F1,p31@NR2F2!0.56!2.67!NR2F1;;chr8:55370487..55370503,+!p1@SOX17!0.56!2.67!SOX17;;chr11:65430554..65430579,-!p3@RELA!0.55!7.62!RELA;;chr21:36260295..36260310,-!p3@RUNX1!0.55!4.57!RUNX1;;chr2:101591314..101591333,+!p2@NPAS2!0.55!3.05!NPAS2;;chr19:45908292..45908374,-!p1@PPP1R13L!0.54!27.80!PPP1R13L;;chr21:36421535..36421610,-!p2@RUNX1!0.54!10.66!RUNX1;;chr8:37963407..37963454,+!p2@ASH2L!0.54!8.76!ASH2L;;chrX:77041657..77041668,-!p2@ATRX!0.54!5.71!ATRX;;chr19:31840130..31840160,-!p2@TSHZ3!0.54!4.19!TSHZ3;;chr10:8096772..8096787,+!p2@GATA3!0.54!3.05!GATA3;;chr11:65686776..65686787,+!p9@DRAP1!0.54!3.05!DRAP1;;chr11:65667846..65667868,-!p1@FOSL1!0.53!81.87!FOSL1;;chr10:77161133..77161176,-!p3@ZNF503!0.53!6.09!ZNF503;;chr2:46602901..46602926,+!p7@EPAS1!0.53!3.43!EPAS1;;chr2:46602879..46602899,+!p8@EPAS1!0.53!3.05!EPAS1;;chr10:111967345..111967422,+!p1@MXI1!0.52!49.12!MXI1;;chr10:77161504..77161530,-!p1@ZNF503!0.52!39.98!ZNF503;;chr19:52598958..52599026,-!p1@ZNF841!0.52!28.18!ZNF841;;chr2:239756671..239756732,+!p1@TWIST2!0.52!9.14!TWIST2;;chr12:104531823..104531849,-!p5@NFYB!0.52!5.71!NFYB;;chr8:23540441..23540466,-!p1@NKX3-1!0.52!5.33!NKX3-1;;chr14:100705587..100705600,+!p5@YY1!0.52!4.95!YY1;;chr8:37963466..37963506,+!p3@ASH2L!0.52!3.05!ASH2L;;chr5:92918860..92918871,+!p10@NR2F1!0.52!2.67!NR2F1;;chr11:46299186..46299195,+!p3@CREB3L1!0.52!2.67!CREB3L1;;chr12:54393880..54393962,+!p1@HOXC9!0.52!2.28!HOXC9;;chr12:54447219..54447237,+!p6@HOXC4!0.52!2.28!HOXC4;;chr12:66218923..66218934,+!p14@HMGA2!0.52!2.28!HMGA2;;chr5:72744336..72744359,-!p5@FOXD1!0.52!2.28!FOXD1;;chr6:85473227..85473243,-!p5@TBX18!0.52!2.28!TBX18;;chrX:24167086..24167111,+!p4@ZFX!0.52!2.28!ZFX;;chr20:42602000..42602034,+!p5@TOX2!0.52!2.28!TOX2;;chr2:176969179..176969226,+!p2@HOXD11!0.52!2.28!HOXD11;;chr2:19558327..19558334,-!p2@OSR1!0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XBP1!0.21!0.76!XBP1;;chr3:71179785..71179810,-!p23@FOXP1!0.21!0.76!FOXP1;;chr19:39390697..39390713,+!p4@NFKBIB!0.21!0.76!NFKBIB;;chr3:193853927..193853944,+!p1@HES1!0.20!46.84!HES1;;chr20:46130619..46130664,+!p1@NCOA3!0.20!38.84!NCOA3;;chr18:47807845..47807918,-!p1@MBD1!0.20!24.75!MBD1;;chr19:19516464..19516492,+!p4@GATAD2A!0.20!6.47!GATAD2A;;chr19:58220517..58220583,-!p1@ZNF154!0.20!3.81!ZNF154;;chr7:99613250..99613264,+!p2@ZKSCAN1!0.20!3.43!ZKSCAN1;;chr19:59084872..59084920,-!p2@MZF1!0.20!3.05!MZF1;;chr12:96588368..96588394,+!p3@ELK3!0.20!3.05!ELK3;;chr2:42795651..42795676,+!p3@MTA3!0.20!3.05!MTA3;;chr22:46546406..46546440,+!p1@PPARA!0.20!2.67!PPARA;;chr4:26322267..26322334,+!p3@RBPJ!0.20!2.67!RBPJ;;chr1:200379104..200379128,-!p2@ZNF281!0.20!2.67!ZNF281;;chr13:41635067..41635100,-!p5@ELF1!0.20!1.90!ELF1;;chr19:20150268..20150298,-!p2@ZNF682!0.20!1.90!ZNF682;;chr2:231084723..231084734,-!p4@SP110!0.20!1.52!SP110;;chr6:27356745..27356777,+!p1@ZNF391!0.20!1.52!ZNF391;;chr1:27022578..27022589,+!p5@ARID1A!0.20!1.52!ARID1A;;chr15:37390482..37390572,-!p7@MEIS2!0.20!1.14!MEIS2;;chr19:12444491..12444517,-!p4@ZNF563!0.20!1.14!ZNF563;;chr19:18391652..18391669,-!p8@JUND!0.20!1.14!JUND;;chr6:143266185..143266238,-!p2@HIVEP2!0.20!1.14!HIVEP2;;chr10:96122739..96122750,-!p3@NOC3L!0.20!1.14!NOC3L;;chr13:41635486..41635497,-!p11@ELF1!0.20!1.14!ELF1;;chr11:65686702..65686715,+!p11@DRAP1!0.20!0.76!DRAP1;;chr12:72056749..72056767,+!p6@THAP2!0.20!0.76!THAP2;;chr2:174829012..174829023,-!p14@SP3!0.20!0.76!SP3;;chr3:170076223..170076242,+!p6@SKIL!0.20!0.76!SKIL;;chr5:43121586..43121601,+!p10@ZNF131!0.20!0.76!ZNF131;;chr6:21594252..21594285,+!p11@SOX4!0.20!0.76!SOX4;;chr15:42783229..42783234,-!p8@ZFP106!0.20!0.76!ZFP106;;chr15:67418119..67418162,+!p5@SMAD3!0.20!0.76!SMAD3;;chr16:3333546..3333558,+!p5@ZNF263!0.20!0.76!ZNF263;;chr20:47894569..47894799,-!p1@ZNFX1!0.19!36.56!ZNFX1;;chr7:64467057..64467078,-!p1@ZNF117!0.19!25.51!ZNF117;;chr19:52873166..52873208,+!p1@ZNF880!0.19!18.66!ZNF880;;chr5:132299210..132299228,-!p3@AFF4!0.19!15.61!AFF4;;chr7:17338266..17338282,+!p1@AHR!0.19!14.47!AHR;;chr11:67007477..67007493,+!p2@KDM2A!0.19!11.42!KDM2A;;chr22:41777927..41777971,+!p1@TEF!0.19!11.04!TEF;;chr19:11925071..11925113,+!p1@ZNF440!0.19!9.52!ZNF440;;chr19:24269981..24270007,+!p2@ZNF254!0.19!8.38!ZNF254;;chr19:12175535..12175554,+!p1@ZNF844!0.19!6.85!ZNF844;;chr12:53774567..53774658,+!p2@SP1!0.19!6.09!SP1;;chr19:40596789..40596825,-!p2@ZNF780A!0.19!3.43!ZNF780A;;chr19:44860820..44860843,-!p1@ZFP112,p1@ZNF285!0.19!3.05!ZFP112;;chr1:8484142..8484232,-!p10@RERE!0.19!3.05!RERE;;chr15:37393449..37393528,-!p4@MEIS2!0.19!3.05!MEIS2;;chr12:133656995..133657049,+!p2@ZNF140!0.19!2.67!ZNF140;;chr17:7382911..7382932,-!p4@ZBTB4!0.19!2.28!ZBTB4;;chr19:50879683..50879695,+!p2@NR1H2!0.19!2.28!NR1H2;;chr1:151319654..151319698,-!p2@RFX5!0.19!2.28!RFX5;;chr20:50808667..50808729,-!p3@ZFP64!0.19!1.90!ZFP64;;chr8:116681150..116681164,-!p5@TRPS1!0.19!1.90!TRPS1;;chr19:19779589..19779616,+!p2@ZNF101!0.19!1.90!ZNF101;;chr2:121493492..121493537,+!p2@GLI2!0.19!1.52!GLI2;;chr2:231084639..231084654,-!p2@SP110!0.19!1.52!SP110;;chr9:20621927..20621996,-!p3@MLLT3!0.19!1.52!MLLT3;;chr13:45151509..45151539,-!p6@TSC22D1!0.19!1.52!TSC22D1;;chr8:128750983..128751021,+!p11@MYC!0.19!1.14!MYC;;chr22:41735880..41735903,+!p5@ZC3H7B!0.19!0.76!ZC3H7B;;chr2:231084820..231084836,-!p5@SP110!0.19!0.76!SP110;;chr3:185826286..185826318,-!p5@ETV5!0.19!0.76!ETV5;;chr3:37217544..37217586,-!p6@LRRFIP2!0.19!0.76!LRRFIP2;;chr4:81105027..81105039,+!p3@PRDM8!0.19!0.76!PRDM8;;chr19:44124019..44124030,-!p2@ZNF428!0.19!0.76!ZNF428;;chr19:12551849..12551868,-!p4@ZNF443!0.19!0.76!ZNF443;;chr19:20844356..20844365,-!p3@ZNF626!0.19!0.76!ZNF626;;chr11:47237922..47237964,+!p4@DDB2!0.19!0.76!DDB2;;chr9:4300004..4300015,-!p6@GLIS3!0.19!0.76!GLIS3;;chr19:53141584..53141625,-!p2@ZNF83!0.18!10.28!ZNF83;;chr6:21597765..21597779,+!p2@SOX4!0.18!10.28!SOX4;;chr19:57106647..57106686,+!p1@ZNF71!0.18!8.38!ZNF71;;chr19:38146320..38146401,-!p1@ZFP30!0.18!6.85!ZFP30;;chr19:12146483..12146546,-!p1@ZNF433!0.18!4.19!ZNF433;;chr7:148892581..148892604,+!p3@ZNF282!0.18!3.43!ZNF282;;chr7:150945754..150945789,-!p2@SMARCD3!0.18!3.43!SMARCD3;;chr1:8483756..8483809,-!p5@RERE!0.18!3.05!RERE;;chr11:62369383..62369399,-!p6@MTA2!0.18!2.28!MTA2;;chr11:615570..615721,-!p2@IRF7!0.18!1.90!IRF7;;chr15:90544532..90544563,+!p1@ZNF710!0.18!1.90!ZNF710;;chr19:19617430..19617443,+!p9@GATAD2A!0.18!1.90!GATAD2A;;chr1:42800836..42800847,-!p3@FOXJ3!0.18!1.90!FOXJ3;;chr1:235383681..235383700,-!p2@ARID4B!0.18!1.52!ARID4B;;chr11:67007522..67007533,+!p5@KDM2A!0.18!1.52!KDM2A;;chr9:4300016..4300039,-!p2@GLIS3!0.18!1.52!GLIS3;;chr15:31619570..31619615,+!p6@KLF13!0.18!1.52!KLF13;;chr19:12444440..12444455,-!p1@ZNF563!0.18!1.52!ZNF563;;chr12:124827609..124827643,-!p9@NCOR2!0.18!1.14!NCOR2;;chr3:42947600..42947680,+!p1@ZNF662!0.18!1.14!ZNF662;;chrX:66763856..66763896,+!p1@AR!0.18!1.14!AR;;chr8:128750493..128750522,+!p10@MYC!0.18!1.14!MYC;;chr10:21823296..2182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|sample_dev_stage=
|ffid_belonging_in_development=CL:0000134
|sample_tissue=ovary
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
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Line 66: Line 40:
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|rna_box=124
|rna_catalog_number=
|rna_concentration=0.60996
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0
|rna_lot_number=
|rna_od260/230=1.93
|rna_od260/280=2.03
|rna_position=H2
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=124H2
|rna_weight_ug=21.3486
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_lot=SOC-43-meta
|sample_cell_type=mesenchymal precursor cell
|sample_collaboration=Claudio Schneider LNCIB
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.93863826010996e-226!GO:0005737;cytoplasm;2.24027940169224e-193!GO:0044444;cytoplasmic part;1.13261660948426e-145!GO:0043226;organelle;1.62247805436259e-138!GO:0043229;intracellular organelle;3.25630652637527e-138!GO:0043231;intracellular membrane-bound organelle;1.95600445036815e-133!GO:0043227;membrane-bound organelle;3.39148818849528e-133!GO:0044422;organelle part;2.44115787391247e-114!GO:0044446;intracellular organelle part;5.01870794193556e-113!GO:0005515;protein binding;1.76853521917998e-79!GO:0032991;macromolecular complex;6.12058687826572e-76!GO:0030529;ribonucleoprotein complex;1.86130195776481e-65!GO:0044238;primary metabolic process;1.25245834345817e-60!GO:0044237;cellular metabolic process;3.86789417955111e-59!GO:0031090;organelle membrane;2.01265467249007e-57!GO:0043170;macromolecule metabolic process;7.6176735066382e-55!GO:0005739;mitochondrion;1.81252328632361e-53!GO:0043233;organelle lumen;2.11060198480688e-53!GO:0031974;membrane-enclosed lumen;2.11060198480688e-53!GO:0019538;protein metabolic process;7.06879156344352e-52!GO:0003723;RNA binding;1.11036983981248e-48!GO:0044428;nuclear part;1.32523430412468e-47!GO:0044260;cellular macromolecule metabolic process;2.5020143791847e-46!GO:0033036;macromolecule localization;4.14214153225095e-46!GO:0044267;cellular protein metabolic process;4.80898199668195e-45!GO:0015031;protein transport;6.17708243354932e-45!GO:0045184;establishment of protein localization;3.40915444533298e-43!GO:0016043;cellular component organization and biogenesis;3.87185737822459e-43!GO:0008104;protein localization;4.07654930274978e-43!GO:0006412;translation;2.92030266793707e-42!GO:0005840;ribosome;4.09593536221192e-42!GO:0005829;cytosol;2.98268654498885e-40!GO:0009058;biosynthetic process;3.09580645894833e-39!GO:0043234;protein complex;6.71805354545698e-39!GO:0003735;structural constituent of ribosome;9.8655746687912e-38!GO:0009059;macromolecule biosynthetic process;2.00545500932476e-37!GO:0044429;mitochondrial part;2.07622848084448e-37!GO:0046907;intracellular transport;1.29547051542117e-35!GO:0031967;organelle envelope;9.76619064048687e-35!GO:0031975;envelope;2.20253125900883e-34!GO:0033279;ribosomal subunit;2.93894467289844e-33!GO:0044249;cellular biosynthetic process;2.49285335311526e-32!GO:0006396;RNA processing;4.43530407776114e-32!GO:0005634;nucleus;4.56239587438818e-31!GO:0006886;intracellular protein transport;4.7201358809582e-29!GO:0031981;nuclear lumen;5.55545768208212e-29!GO:0005783;endoplasmic reticulum;8.96081026245707e-28!GO:0012505;endomembrane system;4.05394249475489e-27!GO:0016071;mRNA metabolic process;4.84837306381332e-27!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.15783499039411e-26!GO:0005740;mitochondrial envelope;3.53354100875641e-26!GO:0008380;RNA splicing;9.02538909940236e-26!GO:0031966;mitochondrial membrane;5.73567483581244e-25!GO:0065003;macromolecular complex assembly;7.15218363511638e-24!GO:0051649;establishment of cellular localization;1.01365662130065e-23!GO:0051641;cellular localization;1.35613983422354e-23!GO:0006397;mRNA processing;2.37132214447569e-23!GO:0005794;Golgi apparatus;3.88825896173862e-23!GO:0019866;organelle inner membrane;7.12377757605201e-23!GO:0043283;biopolymer metabolic process;1.47100039452845e-22!GO:0044445;cytosolic part;1.75533558826892e-22!GO:0005743;mitochondrial inner membrane;7.12567807978822e-22!GO:0006119;oxidative phosphorylation;8.14069210833758e-22!GO:0022607;cellular component assembly;1.10003885429313e-21!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.74958640999045e-21!GO:0044432;endoplasmic reticulum part;6.33278752180925e-21!GO:0006996;organelle organization and biogenesis;3.23369099572688e-20!GO:0006457;protein folding;9.03849994989978e-20!GO:0016462;pyrophosphatase activity;9.05804579984289e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;9.39632793566734e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;1.30474327492132e-19!GO:0043228;non-membrane-bound organelle;2.09476364999688e-19!GO:0043232;intracellular non-membrane-bound organelle;2.09476364999688e-19!GO:0010467;gene expression;2.29497582668044e-19!GO:0048770;pigment granule;4.27541338711788e-19!GO:0042470;melanosome;4.27541338711788e-19!GO:0017111;nucleoside-triphosphatase activity;7.29688818034867e-19!GO:0044455;mitochondrial membrane part;1.3258686246717e-18!GO:0005681;spliceosome;3.86916115032151e-18!GO:0000166;nucleotide binding;4.20626821835539e-18!GO:0015934;large ribosomal subunit;1.05885170414331e-17!GO:0005654;nucleoplasm;1.29506061280452e-17!GO:0016192;vesicle-mediated transport;4.15818576490238e-17!GO:0015935;small ribosomal subunit;1.7677697578365e-16!GO:0048193;Golgi vesicle transport;1.12182352537051e-15!GO:0005746;mitochondrial respiratory chain;1.64286794718221e-15!GO:0000502;proteasome complex (sensu Eukaryota);1.64286794718221e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.10075576373784e-15!GO:0044265;cellular macromolecule catabolic process;2.76616057462499e-15!GO:0022618;protein-RNA complex assembly;4.70947831191661e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;6.80883856042753e-15!GO:0043285;biopolymer catabolic process;6.95180357242397e-15!GO:0042175;nuclear envelope-endoplasmic reticulum network;6.95888979321512e-15!GO:0016874;ligase activity;1.31139989758136e-14!GO:0019941;modification-dependent protein catabolic process;1.42862594119385e-14!GO:0043632;modification-dependent macromolecule catabolic process;1.42862594119385e-14!GO:0044257;cellular protein catabolic process;1.51943168318748e-14!GO:0050136;NADH dehydrogenase (quinone) activity;2.231659777528e-14!GO:0003954;NADH dehydrogenase activity;2.231659777528e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.231659777528e-14!GO:0005789;endoplasmic reticulum membrane;2.29837148733733e-14!GO:0044451;nucleoplasm part;2.44273629610818e-14!GO:0006512;ubiquitin cycle;2.72900866884821e-14!GO:0006511;ubiquitin-dependent protein catabolic process;2.80277940028906e-14!GO:0009057;macromolecule catabolic process;3.32535687408283e-14!GO:0008134;transcription factor binding;4.19364978077361e-14!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.96294791120033e-14!GO:0031980;mitochondrial lumen;7.96294791120033e-14!GO:0005759;mitochondrial matrix;7.96294791120033e-14!GO:0030163;protein catabolic process;8.38997480932205e-14!GO:0051186;cofactor metabolic process;1.02062256317442e-13!GO:0051082;unfolded protein binding;1.29765425506408e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.49805646097934e-13!GO:0017076;purine nucleotide binding;1.75912160043226e-13!GO:0006605;protein targeting;1.77365672160472e-13!GO:0044248;cellular catabolic process;1.95225663398518e-13!GO:0032553;ribonucleotide binding;2.34457259574249e-13!GO:0032555;purine ribonucleotide binding;2.34457259574249e-13!GO:0008135;translation factor activity, nucleic acid binding;2.55911336565756e-13!GO:0043412;biopolymer modification;3.15184557568258e-13!GO:0012501;programmed cell death;5.58495528986031e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.234351133122e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;8.29573981862615e-13!GO:0030964;NADH dehydrogenase complex (quinone);1.17907740746414e-12!GO:0045271;respiratory chain complex I;1.17907740746414e-12!GO:0005747;mitochondrial respiratory chain complex I;1.17907740746414e-12!GO:0006915;apoptosis;1.60830028974083e-12!GO:0006464;protein modification process;1.65916536162672e-12!GO:0005730;nucleolus;1.70293190579282e-12!GO:0042775;organelle ATP synthesis coupled electron transport;2.66411653076009e-12!GO:0042773;ATP synthesis coupled electron transport;2.66411653076009e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.73557119732965e-12!GO:0008219;cell death;9.55484322446904e-12!GO:0016265;death;9.55484322446904e-12!GO:0005793;ER-Golgi intermediate compartment;2.61487587770928e-11!GO:0009055;electron carrier activity;2.7376542967128e-11!GO:0005768;endosome;4.29422891206143e-11!GO:0044431;Golgi apparatus part;7.96133022665463e-11!GO:0009259;ribonucleotide metabolic process;9.06872526527803e-11!GO:0048523;negative regulation of cellular process;9.12137642936085e-11!GO:0006732;coenzyme metabolic process;1.18958545179516e-10!GO:0005761;mitochondrial ribosome;1.79537716506507e-10!GO:0000313;organellar ribosome;1.79537716506507e-10!GO:0009150;purine ribonucleotide metabolic process;2.42831123241906e-10!GO:0006413;translational initiation;2.53119373462352e-10!GO:0003743;translation initiation factor activity;2.69510937536959e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.23089374075558e-10!GO:0006163;purine nucleotide metabolic process;3.3447093815306e-10!GO:0003924;GTPase activity;3.7857901628102e-10!GO:0008565;protein transporter activity;5.8002090571167e-10!GO:0007049;cell cycle;6.49589180429748e-10!GO:0009152;purine ribonucleotide biosynthetic process;7.93610343633465e-10!GO:0009260;ribonucleotide biosynthetic process;8.24760126458104e-10!GO:0008639;small protein conjugating enzyme activity;9.51187493934136e-10!GO:0006164;purine nucleotide biosynthetic process;1.17810750869648e-09!GO:0019787;small conjugating protein ligase activity;1.23612093010864e-09!GO:0005524;ATP binding;1.33582598044201e-09!GO:0030554;adenyl nucleotide binding;1.50987309573849e-09!GO:0043687;post-translational protein modification;1.5649203051985e-09!GO:0032559;adenyl ribonucleotide binding;1.57945299572243e-09!GO:0004842;ubiquitin-protein ligase activity;1.60723559568916e-09!GO:0005635;nuclear envelope;1.82664607719919e-09!GO:0006259;DNA metabolic process;1.94390607344535e-09!GO:0030120;vesicle coat;1.96022483073984e-09!GO:0030662;coated vesicle membrane;1.96022483073984e-09!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.24466302051143e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.24635273957748e-09!GO:0048519;negative regulation of biological process;2.56646023095735e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;2.99733318358421e-09!GO:0000375;RNA splicing, via transesterification reactions;2.99733318358421e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.99733318358421e-09!GO:0043067;regulation of programmed cell death;3.03166823149372e-09!GO:0016023;cytoplasmic membrane-bound vesicle;3.42454005233695e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.62463106885488e-09!GO:0009199;ribonucleoside triphosphate metabolic process;3.65324937979987e-09!GO:0006446;regulation of translational initiation;3.73314654161373e-09!GO:0031988;membrane-bound vesicle;3.79453065860241e-09!GO:0042981;regulation of apoptosis;4.12659737032628e-09!GO:0006461;protein complex assembly;4.8427827486591e-09!GO:0005788;endoplasmic reticulum lumen;5.20416813978633e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.55269617320597e-09!GO:0009144;purine nucleoside triphosphate metabolic process;5.55269617320597e-09!GO:0009141;nucleoside triphosphate metabolic process;6.3219022098509e-09!GO:0015986;ATP synthesis coupled proton transport;6.84022252642058e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;6.84022252642058e-09!GO:0009142;nucleoside triphosphate biosynthetic process;6.93478687665986e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;6.93478687665986e-09!GO:0000139;Golgi membrane;7.06412512350043e-09!GO:0048475;coated membrane;7.43774906819232e-09!GO:0030117;membrane coat;7.43774906819232e-09!GO:0006913;nucleocytoplasmic transport;7.82911639926273e-09!GO:0003712;transcription cofactor activity;8.90944853881659e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.02524543090502e-08!GO:0016881;acid-amino acid ligase activity;1.02720298245917e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.06379065864566e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.06379065864566e-08!GO:0006888;ER to Golgi vesicle-mediated transport;1.12196422349962e-08!GO:0009056;catabolic process;1.27355652651121e-08!GO:0051169;nuclear transport;1.42020168858214e-08!GO:0031965;nuclear membrane;1.57991539668135e-08!GO:0043069;negative regulation of programmed cell death;2.13764822662672e-08!GO:0016604;nuclear body;3.0962264788333e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.13140077994313e-08!GO:0019829;cation-transporting ATPase activity;3.36214806062014e-08!GO:0016887;ATPase activity;4.56182643456918e-08!GO:0043066;negative regulation of apoptosis;5.86161157393921e-08!GO:0016491;oxidoreductase activity;7.11987978580547e-08!GO:0046034;ATP metabolic process;8.32743320479738e-08!GO:0031982;vesicle;8.56827665198792e-08!GO:0042623;ATPase activity, coupled;9.27960150562286e-08!GO:0031410;cytoplasmic vesicle;9.76015066247892e-08!GO:0005773;vacuole;1.07956789168315e-07!GO:0006916;anti-apoptosis;1.16720758201084e-07!GO:0044453;nuclear membrane part;1.21329586654629e-07!GO:0006754;ATP biosynthetic process;1.36125015984044e-07!GO:0006753;nucleoside phosphate metabolic process;1.36125015984044e-07!GO:0051246;regulation of protein metabolic process;1.39404753979299e-07!GO:0044440;endosomal part;1.42542815800411e-07!GO:0010008;endosome membrane;1.42542815800411e-07!GO:0042254;ribosome biogenesis and assembly;1.46467188191024e-07!GO:0009060;aerobic respiration;1.7424777120533e-07!GO:0017038;protein import;2.20905973443606e-07!GO:0015078;hydrogen ion transmembrane transporter activity;2.59847047822074e-07!GO:0000074;regulation of progression through cell cycle;3.27807823129614e-07!GO:0051726;regulation of cell cycle;3.30821498043596e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;3.60166866474226e-07!GO:0031252;leading edge;4.14299153868441e-07!GO:0051188;cofactor biosynthetic process;4.60628051998514e-07!GO:0003714;transcription corepressor activity;6.62165124666211e-07!GO:0022402;cell cycle process;7.05087928557272e-07!GO:0016469;proton-transporting two-sector ATPase complex;7.85712290450051e-07!GO:0016607;nuclear speck;8.94574650718308e-07!GO:0016787;hydrolase activity;9.06529887506523e-07!GO:0005770;late endosome;1.01208783174137e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.06133641647183e-06!GO:0005798;Golgi-associated vesicle;1.11220812241534e-06!GO:0045333;cellular respiration;1.31417763923366e-06!GO:0004386;helicase activity;1.42751635512817e-06!GO:0007243;protein kinase cascade;2.08510018585927e-06!GO:0006099;tricarboxylic acid cycle;2.24636488160412e-06!GO:0046356;acetyl-CoA catabolic process;2.24636488160412e-06!GO:0006399;tRNA metabolic process;2.28336343429234e-06!GO:0000323;lytic vacuole;2.29562042241843e-06!GO:0005764;lysosome;2.29562042241843e-06!GO:0005525;GTP binding;2.89431248295996e-06!GO:0007005;mitochondrion organization and biogenesis;3.02190822618472e-06!GO:0006091;generation of precursor metabolites and energy;3.45202110942474e-06!GO:0005905;coated pit;3.55208426368103e-06!GO:0051187;cofactor catabolic process;3.72868439427198e-06!GO:0008026;ATP-dependent helicase activity;3.7952780459137e-06!GO:0009117;nucleotide metabolic process;3.99802468498886e-06!GO:0051789;response to protein stimulus;4.4368339332496e-06!GO:0006986;response to unfolded protein;4.4368339332496e-06!GO:0006793;phosphorus metabolic process;4.48797832880949e-06!GO:0006796;phosphate metabolic process;4.48797832880949e-06!GO:0005769;early endosome;5.19642360890306e-06!GO:0045786;negative regulation of progression through cell cycle;5.65996596323522e-06!GO:0065002;intracellular protein transport across a membrane;5.8708832057974e-06!GO:0004298;threonine endopeptidase activity;6.56205754476121e-06!GO:0016740;transferase activity;6.67721151974611e-06!GO:0005643;nuclear pore;7.04832907597621e-06!GO:0045454;cell redox homeostasis;7.81083557802735e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;7.96287232347159e-06!GO:0004812;aminoacyl-tRNA ligase activity;7.96287232347159e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;7.96287232347159e-06!GO:0043038;amino acid activation;8.09648040081562e-06!GO:0006418;tRNA aminoacylation for protein translation;8.09648040081562e-06!GO:0043039;tRNA aminoacylation;8.09648040081562e-06!GO:0006084;acetyl-CoA metabolic process;8.524180580862e-06!GO:0045259;proton-transporting ATP synthase complex;1.04851181653397e-05!GO:0016310;phosphorylation;1.2451587945954e-05!GO:0009109;coenzyme catabolic process;1.34650121677853e-05!GO:0030532;small nuclear ribonucleoprotein complex;1.51674218927164e-05!GO:0048522;positive regulation of cellular process;1.53948667859747e-05!GO:0008654;phospholipid biosynthetic process;1.6838795750924e-05!GO:0009108;coenzyme biosynthetic process;1.83217479479976e-05!GO:0006613;cotranslational protein targeting to membrane;2.02445609166301e-05!GO:0003676;nucleic acid binding;2.04102433631854e-05!GO:0032561;guanyl ribonucleotide binding;2.06075041199032e-05!GO:0019001;guanyl nucleotide binding;2.06075041199032e-05!GO:0016564;transcription repressor activity;2.0896311077412e-05!GO:0044262;cellular carbohydrate metabolic process;2.0896311077412e-05!GO:0008361;regulation of cell size;2.12581425787966e-05!GO:0006752;group transfer coenzyme metabolic process;2.50306781245034e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.71679729444201e-05!GO:0015980;energy derivation by oxidation of organic compounds;2.78017322545515e-05!GO:0006974;response to DNA damage stimulus;2.80684813893858e-05!GO:0032446;protein modification by small protein conjugation;2.84191388492245e-05!GO:0051170;nuclear import;3.14608756028002e-05!GO:0016567;protein ubiquitination;3.18257502138048e-05!GO:0030867;rough endoplasmic reticulum membrane;3.25141500037881e-05!GO:0031968;organelle outer membrane;3.34791476115466e-05!GO:0016049;cell growth;3.48931440046688e-05!GO:0050794;regulation of cellular process;3.83395216805017e-05!GO:0043623;cellular protein complex assembly;4.03006151354844e-05!GO:0030036;actin cytoskeleton organization and biogenesis;4.11762309478311e-05!GO:0030133;transport vesicle;4.11762309478311e-05!GO:0006403;RNA localization;4.17811159249274e-05!GO:0016853;isomerase activity;4.51786964202364e-05!GO:0016044;membrane organization and biogenesis;4.60425577746446e-05!GO:0046930;pore complex;4.81296008752213e-05!GO:0008092;cytoskeletal protein binding;4.94600389657902e-05!GO:0006606;protein import into nucleus;4.95917214137884e-05!GO:0019867;outer membrane;5.30167790061902e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;5.37117788715216e-05!GO:0016070;RNA metabolic process;5.43688936048316e-05!GO:0050657;nucleic acid transport;5.57287426664995e-05!GO:0051236;establishment of RNA localization;5.57287426664995e-05!GO:0050658;RNA transport;5.57287426664995e-05!GO:0030659;cytoplasmic vesicle membrane;6.39057536306924e-05!GO:0006366;transcription from RNA polymerase II promoter;8.36039423366702e-05!GO:0000151;ubiquitin ligase complex;8.90913240223973e-05!GO:0003724;RNA helicase activity;0.000115018606253581!GO:0005048;signal sequence binding;0.000121390477151321!GO:0033116;ER-Golgi intermediate compartment membrane;0.00012709544160707!GO:0044433;cytoplasmic vesicle part;0.000139119828149666!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000142105832900618!GO:0005667;transcription factor complex;0.000144511981813547!GO:0006612;protein targeting to membrane;0.000144565665644518!GO:0001558;regulation of cell growth;0.000154092797571902!GO:0006364;rRNA processing;0.000159078347060552!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000186111336406619!GO:0005741;mitochondrial outer membrane;0.000188544528878183!GO:0016859;cis-trans isomerase activity;0.000196260042364364!GO:0016072;rRNA metabolic process;0.000201372002610149!GO:0030658;transport vesicle membrane;0.000217016852457879!GO:0000245;spliceosome assembly;0.000226738840393574!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.000226923637031384!GO:0016779;nucleotidyltransferase activity;0.000235051583378875!GO:0005791;rough endoplasmic reticulum;0.000265472248241244!GO:0009967;positive regulation of signal transduction;0.000278407943028533!GO:0030029;actin filament-based process;0.000285343802999948!GO:0005762;mitochondrial large ribosomal subunit;0.000314006493254784!GO:0000315;organellar large ribosomal subunit;0.000314006493254784!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000341926293050263!GO:0015399;primary active transmembrane transporter activity;0.000341926293050263!GO:0006325;establishment and/or maintenance of chromatin architecture;0.000344704227593455!GO:0048518;positive regulation of biological process;0.00034933895171592!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.000355651118873648!GO:0030118;clathrin coat;0.000355651118873648!GO:0005885;Arp2/3 protein complex;0.000355651118873648!GO:0051427;hormone receptor binding;0.000355713529732276!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000356903913857279!GO:0000278;mitotic cell cycle;0.000357429162896854!GO:0012506;vesicle membrane;0.000378894524777501!GO:0016563;transcription activator activity;0.000385511791605199!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000404611270300506!GO:0001726;ruffle;0.000407895469107942!GO:0008250;oligosaccharyl transferase complex;0.000415211880657727!GO:0006281;DNA repair;0.000422127015918676!GO:0043566;structure-specific DNA binding;0.000430680004744571!GO:0007264;small GTPase mediated signal transduction;0.000483354421520085!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000485617658827526!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000556555125671522!GO:0050789;regulation of biological process;0.00058338353046548!GO:0016126;sterol biosynthetic process;0.000585688863720076!GO:0031324;negative regulation of cellular metabolic process;0.000610541166593368!GO:0004576;oligosaccharyl transferase activity;0.000613378187213662!GO:0043284;biopolymer biosynthetic process;0.000613488541747846!GO:0018196;peptidyl-asparagine modification;0.000617975347917975!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000617975347917975!GO:0035257;nuclear hormone receptor binding;0.000670408165735788!GO:0009719;response to endogenous stimulus;0.000693297762244877!GO:0006323;DNA packaging;0.000693297762244877!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000706007016114417!GO:0051028;mRNA transport;0.000710832801506578!GO:0019899;enzyme binding;0.000714161452356466!GO:0030660;Golgi-associated vesicle membrane;0.000823898958513195!GO:0051920;peroxiredoxin activity;0.000843997757306506!GO:0030663;COPI coated vesicle membrane;0.000854690744589864!GO:0030126;COPI vesicle coat;0.000854690744589864!GO:0009165;nucleotide biosynthetic process;0.00085740082102408!GO:0048471;perinuclear region of cytoplasm;0.000897223616988541!GO:0007010;cytoskeleton organization and biogenesis;0.000897227959968375!GO:0048468;cell development;0.000929225296775111!GO:0046474;glycerophospholipid biosynthetic process;0.000960173172123401!GO:0003697;single-stranded DNA binding;0.000971425248707706!GO:0003713;transcription coactivator activity;0.00100706288164159!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.0010260207018011!GO:0043021;ribonucleoprotein binding;0.001034396546561!GO:0030132;clathrin coat of coated pit;0.001034396546561!GO:0016197;endosome transport;0.00112936522589617!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00115210853185143!GO:0016568;chromatin modification;0.0012393124477669!GO:0006891;intra-Golgi vesicle-mediated transport;0.00124395545372716!GO:0015630;microtubule cytoskeleton;0.00126310929434531!GO:0006414;translational elongation;0.00126772009777625!GO:0030176;integral to endoplasmic reticulum membrane;0.0014367890212482!GO:0046489;phosphoinositide biosynthetic process;0.00144090798528388!GO:0007040;lysosome organization and biogenesis;0.00144827923183983!GO:0030119;AP-type membrane coat adaptor complex;0.0014782587617758!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00149880477785195!GO:0008186;RNA-dependent ATPase activity;0.00159168094699358!GO:0030125;clathrin vesicle coat;0.00167439418860331!GO:0030665;clathrin coated vesicle membrane;0.00167439418860331!GO:0019843;rRNA binding;0.00168838889024603!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00172250784153345!GO:0008610;lipid biosynthetic process;0.00175773776008217!GO:0007033;vacuole organization and biogenesis;0.00178128064242564!GO:0051276;chromosome organization and biogenesis;0.0018922422046726!GO:0045045;secretory pathway;0.00192420216351295!GO:0006509;membrane protein ectodomain proteolysis;0.00193816722254777!GO:0033619;membrane protein proteolysis;0.00193816722254777!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00193816722254777!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00193816722254777!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00193816722254777!GO:0065009;regulation of a molecular function;0.00194481173394863!GO:0051168;nuclear export;0.00204049988373144!GO:0009892;negative regulation of metabolic process;0.00204597363088431!GO:0042802;identical protein binding;0.00212090447653905!GO:0030137;COPI-coated vesicle;0.00223177703925313!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00237709370443379!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00237709370443379!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00237709370443379!GO:0006839;mitochondrial transport;0.0024427512366891!GO:0031418;L-ascorbic acid binding;0.00254912140459956!GO:0030131;clathrin adaptor complex;0.00260455490855607!GO:0006897;endocytosis;0.00262773748796115!GO:0010324;membrane invagination;0.00262773748796115!GO:0005813;centrosome;0.00272392579189523!GO:0046467;membrane lipid biosynthetic process;0.00283135919011066!GO:0007050;cell cycle arrest;0.00287021801332266!GO:0031543;peptidyl-proline dioxygenase activity;0.00292115932097557!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.0030067870976096!GO:0015992;proton transport;0.00307633940998405!GO:0030027;lamellipodium;0.00315593119161996!GO:0006818;hydrogen transport;0.00318356297028666!GO:0065004;protein-DNA complex assembly;0.00320451366752462!GO:0000314;organellar small ribosomal subunit;0.00324050772682246!GO:0005763;mitochondrial small ribosomal subunit;0.00324050772682246!GO:0031902;late endosome membrane;0.00328285884396538!GO:0030134;ER to Golgi transport vesicle;0.00344153965235003!GO:0031901;early endosome membrane;0.00344271987227886!GO:0046519;sphingoid metabolic process;0.00350457310684691!GO:0003899;DNA-directed RNA polymerase activity;0.00361875116176364!GO:0043681;protein import into mitochondrion;0.00361875116176364!GO:0043492;ATPase activity, coupled to movement of substances;0.00363522149004765!GO:0032940;secretion by cell;0.00378549595326418!GO:0030127;COPII vesicle coat;0.00379665989853762!GO:0012507;ER to Golgi transport vesicle membrane;0.00379665989853762!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00380218254420925!GO:0048487;beta-tubulin binding;0.00383805905296661!GO:0004004;ATP-dependent RNA helicase activity;0.00389404030223132!GO:0003729;mRNA binding;0.00391246177701911!GO:0008243;plasminogen activator activity;0.00401861494754583!GO:0008047;enzyme activator activity;0.00403982293655951!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00405891059257909!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00435248556644581!GO:0017166;vinculin binding;0.00452232447322525!GO:0008632;apoptotic program;0.00455711033297641!GO:0048500;signal recognition particle;0.00479642231310165!GO:0022890;inorganic cation transmembrane transporter activity;0.00483172685677486!GO:0031072;heat shock protein binding;0.0050554319481433!GO:0006979;response to oxidative stress;0.00505977909395172!GO:0007006;mitochondrial membrane organization and biogenesis;0.00555163578892979!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00556916691725287!GO:0006626;protein targeting to mitochondrion;0.0056304054688532!GO:0035258;steroid hormone receptor binding;0.00574432613660253!GO:0019798;procollagen-proline dioxygenase activity;0.00575310946151153!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.00592460895236962!GO:0005815;microtubule organizing center;0.00601799487276635!GO:0040008;regulation of growth;0.00629878124664401!GO:0003746;translation elongation factor activity;0.00637842277265422!GO:0008139;nuclear localization sequence binding;0.00637842277265422!GO:0006672;ceramide metabolic process;0.00641057927406726!GO:0006695;cholesterol biosynthetic process;0.0067665957195788!GO:0006650;glycerophospholipid metabolic process;0.00676792456892993!GO:0022406;membrane docking;0.00725493536891693!GO:0048278;vesicle docking;0.00725493536891693!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00725496945923777!GO:0045047;protein targeting to ER;0.00725496945923777!GO:0007030;Golgi organization and biogenesis;0.00735271271581811!GO:0006260;DNA replication;0.00740519418354472!GO:0004177;aminopeptidase activity;0.00789661110668304!GO:0030384;phosphoinositide metabolic process;0.00802523867896103!GO:0006904;vesicle docking during exocytosis;0.00802523867896103!GO:0045792;negative regulation of cell size;0.00828311768837205!GO:0003779;actin binding;0.00831045271742299!GO:0001666;response to hypoxia;0.00918027061567051!GO:0016363;nuclear matrix;0.00925425951294789!GO:0006497;protein amino acid lipidation;0.0093323548721187!GO:0005869;dynactin complex;0.00941625516368362!GO:0006383;transcription from RNA polymerase III promoter;0.00941881884720482!GO:0005975;carbohydrate metabolic process;0.00943707234791726!GO:0030308;negative regulation of cell growth;0.0095058754757751!GO:0051087;chaperone binding;0.00984905516837696!GO:0003711;transcription elongation regulator activity;0.00984905516837696!GO:0006892;post-Golgi vesicle-mediated transport;0.0101019092712466!GO:0043065;positive regulation of apoptosis;0.0105391815488453!GO:0030521;androgen receptor signaling pathway;0.0105904629382394!GO:0016481;negative regulation of transcription;0.0105904629382394!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0106517048295745!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0106517048295745!GO:0000059;protein import into nucleus, docking;0.0109038690864902!GO:0015631;tubulin binding;0.0111296412486964!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0112964445024086!GO:0008312;7S RNA binding;0.0114744579307283!GO:0006333;chromatin assembly or disassembly;0.0117314308897798!GO:0030031;cell projection biogenesis;0.0118618182076046!GO:0043068;positive regulation of programmed cell death;0.0124051811055483!GO:0005862;muscle thin filament tropomyosin;0.0127316749397707!GO:0008180;signalosome;0.0127616050152282!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0129229658544693!GO:0006778;porphyrin metabolic process;0.0131746387110707!GO:0033013;tetrapyrrole metabolic process;0.0131746387110707!GO:0006007;glucose catabolic process;0.0132370727992617!GO:0016860;intramolecular oxidoreductase activity;0.0135101656395242!GO:0003690;double-stranded DNA binding;0.0135101656395242!GO:0005586;collagen type III;0.0135101656395242!GO:0006354;RNA elongation;0.014149852250017!GO:0007242;intracellular signaling cascade;0.0144029314870513!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0146364045787155!GO:0003756;protein disulfide isomerase activity;0.0148977727996628!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0148977727996628!GO:0005774;vacuolar membrane;0.0148977727996628!GO:0051252;regulation of RNA metabolic process;0.0148977727996628!GO:0016408;C-acyltransferase activity;0.0148977727996628!GO:0030032;lamellipodium biogenesis;0.0148977727996628!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0148977727996628!GO:0042158;lipoprotein biosynthetic process;0.0150428571080172!GO:0006595;polyamine metabolic process;0.0152192233073636!GO:0006417;regulation of translation;0.0154488599675629!GO:0042168;heme metabolic process;0.0154488599675629!GO:0016272;prefoldin complex;0.0159436442254543!GO:0050681;androgen receptor binding;0.0163700112607999!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.016393722279577!GO:0015002;heme-copper terminal oxidase activity;0.016393722279577!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.016393722279577!GO:0004129;cytochrome-c oxidase activity;0.016393722279577!GO:0007034;vacuolar transport;0.0164318128305692!GO:0051540;metal cluster binding;0.0181638000393191!GO:0051536;iron-sulfur cluster binding;0.0181638000393191!GO:0030149;sphingolipid catabolic process;0.0183617360108251!GO:0031529;ruffle organization and biogenesis;0.0185349435449186!GO:0048144;fibroblast proliferation;0.0185399241884762!GO:0048145;regulation of fibroblast proliferation;0.0185399241884762!GO:0006402;mRNA catabolic process;0.0192040876818158!GO:0008234;cysteine-type peptidase activity;0.0196547942515558!GO:0051301;cell division;0.0200051615533263!GO:0006506;GPI anchor biosynthetic process;0.0201210869907514!GO:0006740;NADPH regeneration;0.0201806472177106!GO:0006098;pentose-phosphate shunt;0.0201806472177106!GO:0051287;NAD binding;0.0215676083295863!GO:0043433;negative regulation of transcription factor activity;0.0217989460979872!GO:0050662;coenzyme binding;0.0219131650427449!GO:0008320;protein transmembrane transporter activity;0.0223725794027962!GO:0000209;protein polyubiquitination;0.022394542957166!GO:0051329;interphase of mitotic cell cycle;0.0226188734975371!GO:0007021;tubulin folding;0.0226662677609104!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0226905792000617!GO:0005938;cell cortex;0.0227901537568915!GO:0000339;RNA cap binding;0.0231754281771415!GO:0051325;interphase;0.0238774136856558!GO:0004197;cysteine-type endopeptidase activity;0.023972344638991!GO:0046483;heterocycle metabolic process;0.0241796177483796!GO:0051101;regulation of DNA binding;0.0244872139706032!GO:0004287;prolyl oligopeptidase activity;0.024607694899936!GO:0035035;histone acetyltransferase binding;0.0248174118640254!GO:0005694;chromosome;0.025097404152811!GO:0005832;chaperonin-containing T-complex;0.025097404152811!GO:0000902;cell morphogenesis;0.0255260504429336!GO:0032989;cellular structure morphogenesis;0.0255260504429336!GO:0008484;sulfuric ester hydrolase activity;0.0255500068115136!GO:0031301;integral to organelle membrane;0.0256443729433484!GO:0051272;positive regulation of cell motility;0.0259614779924546!GO:0040017;positive regulation of locomotion;0.0259614779924546!GO:0006643;membrane lipid metabolic process;0.0260537845175891!GO:0030145;manganese ion binding;0.0260901704857499!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0270840015613988!GO:0006458;'de novo' protein folding;0.0272163854749843!GO:0051084;'de novo' posttranslational protein folding;0.0272163854749843!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0272320214507521!GO:0050811;GABA receptor binding;0.0275148135935608!GO:0043022;ribosome binding;0.027913596774873!GO:0065007;biological regulation;0.0287325366253691!GO:0004674;protein serine/threonine kinase activity;0.028974429018046!GO:0050790;regulation of catalytic activity;0.0290487434701983!GO:0016301;kinase activity;0.029977513938026!GO:0008022;protein C-terminus binding;0.0300373921144962!GO:0000087;M phase of mitotic cell cycle;0.0302276775934188!GO:0030041;actin filament polymerization;0.0304899554501564!GO:0051059;NF-kappaB binding;0.0307430301454745!GO:0006118;electron transport;0.0310784830834643!GO:0030503;regulation of cell redox homeostasis;0.0312797276650507!GO:0006505;GPI anchor metabolic process;0.0313718996869176!GO:0009966;regulation of signal transduction;0.0313718996869176!GO:0051128;regulation of cellular component organization and biogenesis;0.03198674641455!GO:0043488;regulation of mRNA stability;0.03198674641455!GO:0043487;regulation of RNA stability;0.03198674641455!GO:0006611;protein export from nucleus;0.0321719287214283!GO:0007067;mitosis;0.0323775982108261!GO:0030140;trans-Golgi network transport vesicle;0.0323775982108261!GO:0006769;nicotinamide metabolic process;0.0323775982108261!GO:0005096;GTPase activator activity;0.0324199706400647!GO:0044437;vacuolar part;0.0329382213689231!GO:0008154;actin polymerization and/or depolymerization;0.0331450162785155!GO:0007265;Ras protein signal transduction;0.0338125201319127!GO:0032507;maintenance of cellular protein localization;0.0340874623130055!GO:0030100;regulation of endocytosis;0.0351385147634589!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0351385147634589!GO:0000096;sulfur amino acid metabolic process;0.0351594798983304!GO:0005684;U2-dependent spliceosome;0.0351594798983304!GO:0000785;chromatin;0.0352402284001242!GO:0008538;proteasome activator activity;0.0356854993099728!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0364198716942574!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0364198716942574!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0368005431885329!GO:0006739;NADP metabolic process;0.0368059180862147!GO:0031625;ubiquitin protein ligase binding;0.0372644137419527!GO:0051235;maintenance of localization;0.0379366782975884!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0382302467515335!GO:0006790;sulfur metabolic process;0.0384478648145677!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0384478648145677!GO:0033043;regulation of organelle organization and biogenesis;0.0384478648145677!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0384854445621271!GO:0030433;ER-associated protein catabolic process;0.0384859520938778!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0384859520938778!GO:0048146;positive regulation of fibroblast proliferation;0.0387774805073071!GO:0044427;chromosomal part;0.0389328871912235!GO:0022403;cell cycle phase;0.0392532297618744!GO:0030518;steroid hormone receptor signaling pathway;0.0392877995890875!GO:0031124;mRNA 3'-end processing;0.0395311015513916!GO:0030833;regulation of actin filament polymerization;0.0395929573468965!GO:0033673;negative regulation of kinase activity;0.0396479518850619!GO:0006469;negative regulation of protein kinase activity;0.0396479518850619!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0399274891212808!GO:0005581;collagen;0.0401337466652729!GO:0051270;regulation of cell motility;0.0403137172109046!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0404668168438123!GO:0030880;RNA polymerase complex;0.0405711388122015!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0405909836414291!GO:0006950;response to stress;0.0408029814673373!GO:0060166;olfactory pit development;0.0408029814673373!GO:0021768;nucleus accumbens development;0.0408029814673373!GO:0002072;optic cup morphogenesis involved in camera-type eye development;0.0408029814673373!GO:0003678;DNA helicase activity;0.0410334839516851!GO:0045926;negative regulation of growth;0.0413859118776326!GO:0019318;hexose metabolic process;0.0414904185447639!GO:0006779;porphyrin biosynthetic process;0.043605922153807!GO:0033014;tetrapyrrole biosynthetic process;0.043605922153807!GO:0045334;clathrin-coated endocytic vesicle;0.0441988962178381!GO:0005801;cis-Golgi network;0.0453569406333447!GO:0006378;mRNA polyadenylation;0.0460928752386446!GO:0005765;lysosomal membrane;0.0460928752386446!GO:0006665;sphingolipid metabolic process;0.0463366458330676!GO:0051098;regulation of binding;0.0465696872392586!GO:0022884;macromolecule transmembrane transporter activity;0.0466151484497164!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0466151484497164!GO:0031371;ubiquitin conjugating enzyme complex;0.0470621368502397!GO:0030984;kininogen binding;0.0472421586366465!GO:0004213;cathepsin B activity;0.0472421586366465!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0472633241643031!GO:0016776;phosphotransferase activity, phosphate group as acceptor;0.0472821281299979!GO:0005996;monosaccharide metabolic process;0.0475030323082929!GO:0007041;lysosomal transport;0.0476166881568397!GO:0022408;negative regulation of cell-cell adhesion;0.0480628497380407!GO:0045185;maintenance of protein localization;0.0485516747251268!GO:0008383;manganese superoxide dismutase activity;0.0489523652357933!GO:0001315;age-dependent response to reactive oxygen species;0.0489523652357933!GO:0030130;clathrin coat of trans-Golgi network vesicle;0.0491272006735364!GO:0012510;trans-Golgi network transport vesicle membrane;0.0491272006735364!GO:0016125;sterol metabolic process;0.0492722818912062!GO:0006516;glycoprotein catabolic process;0.0494983707773433
|sample_id=11838
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=ovary
|top_motifs=NKX3-1:2.54098038969;HOX{A5,B5}:2.07915162204;GZF1:2.02774791077;HIF1A:1.92646499503;TEF:1.91433859337;GLI1..3:1.86843569687;PAX4:1.73404115337;NFE2L1:1.57822248132;UFEwm:1.56682155542;AIRE:1.56154300283;SPZ1:1.3785485476;ZBTB6:1.35859672265;XBP1:1.34498253574;TAL1_TCF{3,4,12}:1.32746585066;HSF1,2:1.30803237636;EVI1:1.21253588213;TEAD1:1.16914011667;POU1F1:1.16854493905;PPARG:1.09591123365;ZIC1..3:1.08528500504;NKX3-2:1.05291206523;HMX1:1.04447810195;SRF:1.04291406661;NKX2-1,4:1.03532666885;ESR1:1.02392195445;ZNF384:0.981719177384;ONECUT1,2:0.969766466978;RXR{A,B,G}:0.965445383462;NR3C1:0.963005815186;ZBTB16:0.956109788292;NR6A1:0.915525121355;GCM1,2:0.897690523656;MYBL2:0.866129342582;ATF6:0.801378318758;EN1,2:0.788954126968;RXRA_VDR{dimer}:0.75448797067;EP300:0.711215688636;TBP:0.696097653711;TLX1..3_NFIC{dimer}:0.695319398872;HES1:0.690485094758;NFATC1..3:0.658251497937;HMGA1,2:0.630684252993;TOPORS:0.629303127834;ZNF238:0.614917215826;POU3F1..4:0.609938333402;TFCP2:0.59638130145;GATA4:0.594117546146;FOXD3:0.573645006984;MTE{core}:0.569686300512;GFI1B:0.559734651124;KLF4:0.555186583212;TBX4,5:0.535025789459;ALX4:0.489259435347;TP53:0.472948707767;XCPE1{core}:0.471210012931;IKZF1:0.465599655492;PRDM1:0.454276990059;MAFB:0.452486935177;NFE2L2:0.430368278316;HOX{A4,D4}:0.383502371451;PAX1,9:0.350807779309;MAZ:0.336282850207;HLF:0.331003141205;GTF2I:0.327736959528;PAX6:0.327168484033;SMAD1..7,9:0.320965400836;BACH2:0.318607843761;HOXA9_MEIS1:0.300089442409;GTF2A1,2:0.285556402453;ZNF148:0.282221682572;FOSL2:0.275245359772;NR1H4:0.245024745785;EBF1:0.237630042046;HIC1:0.204390792545;MZF1:0.187367811171;PAX5:0.186911928122;MYFfamily:0.17703574186;FOS_FOS{B,L1}_JUN{B,D}:0.170255705637;TFAP2B:0.155095718081;FOX{I1,J2}:0.148177050582;FOXL1:0.13971480609;IRF1,2:0.124331029839;CDC5L:0.118556358991;NFE2:0.113216599194;SP1:0.0870176603934;CRX:0.0836998864453;ZNF423:0.082478099722;FOXO1,3,4:0.0770369427902;HOX{A6,A7,B6,B7}:0.0549209016104;ARID5B:0.0327969252868;NFIL3:0.020174259483;LMO2:0.01994861089;REST:0.00242822587486;HNF1A:-0.00343333150598;POU6F1:-0.00612958129177;FOXM1:-0.00669071366189;ALX1:-0.012380612526;DMAP1_NCOR{1,2}_SMARC:-0.0155584254225;PAX2:-0.0353488988135;bHLH_family:-0.0367262853783;LHX3,4:-0.0624741084687;STAT2,4,6:-0.0643310764128;NHLH1,2:-0.0949210955772;TFAP2{A,C}:-0.106725051652;SOX17:-0.114584336676;SREBF1,2:-0.117198326206;IRF7:-0.129336152268;RREB1:-0.138640429925;NKX2-2,8:-0.141624397826;ESRRA:-0.191720152386;AR:-0.203661801679;JUN:-0.223260904939;NFKB1_REL_RELA:-0.22416633941;EGR1..3:-0.232642036447;RFX1:-0.245443553936;SOX2:-0.246905965818;PITX1..3:-0.254159600831;ADNP_IRX_SIX_ZHX:-0.276131184134;HBP1_HMGB_SSRP1_UBTF:-0.292456191318;ZFP161:-0.295487648516;SNAI1..3:-0.331307032145;RUNX1..3:-0.338450953906;NANOG{mouse}:-0.340890508317;PRRX1,2:-0.343314942474;PAX3,7:-0.344679210258;TLX2:-0.345100942163;TFAP4:-0.348108871125;OCT4_SOX2{dimer}:-0.350448974957;FOX{D1,D2}:-0.358599895389;DBP:-0.360361787836;MED-1{core}:-0.360969492318;FOXP1:-0.361947600102;PAX8:-0.372244211153;STAT5{A,B}:-0.37798235419;ELK1,4_GABP{A,B1}:-0.41023237164;ATF2:-0.421334845207;AHR_ARNT_ARNT2:-0.426199041318;HAND1,2:-0.426226994743;ZNF143:-0.42810208785;MTF1:-0.440661859852;FOXN1:-0.464497682137;MYOD1:-0.465571554138;HNF4A_NR2F1,2:-0.490828276827;NRF1:-0.491456777983;MEF2{A,B,C,D}:-0.503499704584;CEBPA,B_DDIT3:-0.511641815242;ETS1,2:-0.518070132622;PATZ1:-0.518771254455;FOXP3:-0.543285869403;SOX5:-0.593955988218;POU5F1:-0.618492405784;GATA6:-0.625750977035;CDX1,2,4:-0.63449012827;IKZF2:-0.680874759247;LEF1_TCF7_TCF7L1,2:-0.682877080368;ATF5_CREB3:-0.685605032625;ZEB1:-0.689097301174;SPI1:-0.711073203459;YY1:-0.721581635006;CUX2:-0.736674900134;TFDP1:-0.738064051257;SPIB:-0.754436693392;BPTF:-0.762332455495;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.762722308023;NKX6-1,2:-0.802754488422;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.811832062754;TGIF1:-0.822285227473;NANOG:-0.824519560633;ELF1,2,4:-0.856833553871;PDX1:-0.857550337421;E2F1..5:-0.890976433781;CREB1:-0.900188363703;NFIX:-0.904117386137;STAT1,3:-0.94550628565;RFX2..5_RFXANK_RFXAP:-0.970993439928;MYB:-1.00920154827;ATF4:-1.07378721524;NR5A1,2:-1.08266347932;FOXQ1:-1.10174374349;PBX1:-1.10283286465;SOX{8,9,10}:-1.10468199026;VSX1,2:-1.15689761279;T:-1.16689884668;NKX2-3_NKX2-5:-1.29114944972;NFY{A,B,C}:-1.3076388871;POU2F1..3:-1.32531112199;RBPJ:-1.40096117864;FOXA2:-1.40234440717;GFI1:-1.45011255718;RORA:-1.50678624516;BREu{core}:-1.62467094767;FOX{F1,F2,J1}:-1.68809999554
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11838-124H2;search_select_hide=table117:FF:11838-124H2
}}
}}

Latest revision as of 18:23, 4 June 2020

Name:mesenchymal precursor cell - ovarian cancer metastasis, donor4
Species:Human (Homo sapiens)
Library ID:CNhs13097
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueovary
dev stageNA
sexNA
ageNA
cell typemesenchymal precursor cell
cell lineNA
companyNA
collaborationClaudio Schneider LNCIB
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005617
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13097 CAGE DRX008562 DRR009434
Accession ID Hg19

Library idBAMCTSS
CNhs13097 DRZ000859 DRZ002244
Accession ID Hg38

Library idBAMCTSS
CNhs13097 DRZ012209 DRZ013594
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.365
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.235
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.19
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.0861
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.564
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.331
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.158
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.133
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0.246
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0.517
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.803
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.646
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.14
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.0574
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.43
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.395
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.331
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.945
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.472
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic1.259
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.626
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0.0392
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.463
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13097

Jaspar motifP-value
MA0002.20.479
MA0003.10.764
MA0004.10.0214
MA0006.10.0397
MA0007.10.285
MA0009.10.711
MA0014.10.917
MA0017.10.049
MA0018.21.70224e-6
MA0019.10.914
MA0024.16.87284e-9
MA0025.10.00662
MA0027.10.412
MA0028.10.00154
MA0029.10.588
MA0030.10.125
MA0031.10.00328
MA0035.20.48
MA0038.12.49168e-5
MA0039.20.256
MA0040.10.861
MA0041.10.906
MA0042.10.827
MA0043.18.8553e-5
MA0046.10.00537
MA0047.20.00631
MA0048.10.296
MA0050.10.0487
MA0051.10.965
MA0052.10.00756
MA0055.10.586
MA0057.10.251
MA0058.10.00792
MA0059.10.821
MA0060.12.73418e-16
MA0061.10.953
MA0062.21.73183e-8
MA0065.20.469
MA0066.10.131
MA0067.10.00763
MA0068.10.11
MA0069.10.195
MA0070.10.908
MA0071.10.827
MA0072.10.441
MA0073.10.918
MA0074.10.306
MA0076.11.37574e-5
MA0077.10.645
MA0078.10.989
MA0079.20.709
MA0080.22.9323e-9
MA0081.10.00399
MA0083.10.0117
MA0084.10.861
MA0087.10.439
MA0088.10.221
MA0090.12.16704e-4
MA0091.10.646
MA0092.10.0892
MA0093.10.0275
MA0099.20.00324
MA0100.10.018
MA0101.10.116
MA0102.20.246
MA0103.10.358
MA0104.20.0107
MA0105.10.447
MA0106.10.0643
MA0107.10.317
MA0108.20.346
MA0111.10.32
MA0112.20.0138
MA0113.10.855
MA0114.10.234
MA0115.10.247
MA0116.10.932
MA0117.10.582
MA0119.10.0412
MA0122.10.852
MA0124.10.0661
MA0125.10.156
MA0131.10.395
MA0135.10.0218
MA0136.15.10816e-12
MA0137.20.0489
MA0138.20.551
MA0139.10.792
MA0140.10.277
MA0141.10.473
MA0142.10.128
MA0143.10.831
MA0144.10.612
MA0145.10.19
MA0146.10.736
MA0147.10.0334
MA0148.10.135
MA0149.10.47
MA0150.10.59
MA0152.10.0799
MA0153.10.36
MA0154.10.943
MA0155.10.209
MA0156.12.7783e-7
MA0157.10.101
MA0159.10.198
MA0160.10.106
MA0162.10.0236
MA0163.10.0603
MA0164.10.215
MA0258.10.425
MA0259.10.246



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13097

Novel motifP-value
10.867
100.461
1000.73
1010.863
1020.523
1030.598
1040.549
1050.0785
1060.0168
1070.0371
1080.0854
1090.867
110.369
1100.364
1110.437
1120.253
1130.043
1140.0558
1150.0175
1160.159
1170.38
1180.199
1190.827
120.383
1200.197
1210.909
1220.455
1230.0868
1240.337
1250.479
1260.694
1270.949
1280.0996
1290.991
130.641
1300.108
1310.0855
1320.294
1330.944
1340.997
1350.189
1360.761
1370.149
1380.505
1390.259
140.393
1400.47
1410.613
1420.543
1430.919
1440.205
1450.409
1460.301
1470.0843
1480.525
1490.0655
150.521
1500.207
1510.537
1520.0142
1530.864
1540.662
1550.187
1560.741
1570.886
1580.134
1590.88
160.0181
1600.457
1610.998
1620.367
1630.0138
1640.0162
1650.528
1660.315
1670.939
1680.166
1690.0743
170.273
180.533
190.255
20.493
200.642
210.487
220.463
230.0866
240.835
250.0373
260.657
270.593
280.787
290.307
30.287
300.851
310.795
329.04696e-9
330.889
340.856
350.888
360.0261
370.0186
380.585
390.131
40.235
400.737
410.349
420.41
430.443
440.217
450.979
460.512
470.997
480.796
490.801
50.848
500.937
510.777
520.587
530.114
540.453
550.203
560.848
570.424
580.283
590.365
60.953
600.682
610.287
620.512
630.233
640.639
650.813
660.14
670.476
680.949
690.325
70.135
700.0638
710.32
720.835
730.0122
740.13
750.683
760.443
770.0175
780.619
790.0145
80.0508
800.174
810.425
820.607
830.236
840.764
850.0816
860.777
870.188
880.541
890.0286
90.731
900.432
910.475
920.171
930.892
940.904
950.972
960.744
970.457
980.32
990.0727



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13097


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
193 (reproductive organ cancer)
2394 (ovarian cancer)
120 (female reproductive organ cancer)

UBERON: Anatomy
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000272 (human ovarian cancer mesenchymal precursor cell sample)
0000274 (human mesenchymal precursor cell- ovarian cancer-metastasis sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)

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