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{{f5samples
{{f5samples
|F5samples=
|DRA_sample_Accession=CAGE@SAMD00005113
|accession_numbers=CAGE;DRX007896;DRR008768;DRZ000193;DRZ001578;DRZ011543;DRZ012928
|ancestors_in_anatomy_facet=
|ancestors_in_anatomy_facet=
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000255,CL:0000548
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0000255
|ancestors_in_disease_facet=DOID:0050687,DOID:14566,DOID:162,DOID:305,DOID:4
|ancestors_in_disease_facet=DOID:4,DOID:162,DOID:14566,DOID:0050687,DOID:305
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100297,FF:0101120
|comment=
|comment=
|created_by=
|created_by=
|creation_date=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|expression_enrichment_score=chr1:209979467..209979494,-!p1@IRF6!2.33!235.46!IRF6;;chr17:80797886..80797906,-!p1@ZNF750!2.25!176.30!ZNF750;;chr6:1312325..1312340,+!p1@FOXQ1!2.11!203.88!FOXQ1;;chr1:209979411..209979433,-!p2@IRF6!2.03!105.12!IRF6;;chr1:201979743..201979762,+!p1@ELF3!2.01!100.88!ELF3;;chr5:134369905..134369972,-!p1@PITX1!1.93!127.04!PITX1;;chr17:7493405..7493419,-!p1@SOX15!1.93!84.61!SOX15;;chr5:134369879..134369898,-!p2@PITX1!1.88!74.95!PITX1;;chr12:52445218..52445237,+!p1@NR4A1!1.87!865.94!NR4A1;;chr6:126240442..126240459,+!p4@NCOA7!1.82!82.49!NCOA7;;chr16:54320617..54320643,-!p3@IRX3!1.75!70.94!IRX3;;chr2:176969228..176969260,+!p1@HOXD11!1.75!55.15!HOXD11;;chr6:10415484..10415508,-!p3@TFAP2A!1.74!54.45!TFAP2A;;chr7:96654133..96654150,-!p1@DLX5!1.71!49.97!DLX5;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.70!49.02!ZBED1;;chr16:54320646..54320672,-!p2@IRX3!1.65!65.76!IRX3;;chr11:65554528..65554546,+!p1@OVOL1!1.65!43.60!OVOL1;;chr8:10588010..10588030,-!p1@SOX7!1.64!43.13!SOX7;;chr13:73633131..73633149,+!p1@KLF5!1.59!382.30!KLF5;;chr6:126240380..126240430,+!p2@NCOA7!1.59!94.98!NCOA7;;chr2:176969179..176969226,+!p2@HOXD11!1.58!37.00!HOXD11;;chr5:2751762..2751784,-!p1@IRX2!1.57!35.83!IRX2;;chr2:157189180..157189290,-!p1@NR4A2!1.54!166.87!NR4A2;;chr17:48072574..48072597,-!p1@DLX3!1.54!33.47!DLX3;;chr11:34642612..34642646,+!p1@EHF!1.54!33.47!EHF;;chr12:54785074..54785122,-!p2@ZNF385A!1.53!49.97!ZNF385A;;chr1:151804244..151804310,-!p1@RORC!1.53!32.53!RORC;;chr6:10415276..10415341,-!p2@TFAP2A!1.50!37.00!TFAP2A;;chr1:201979703..201979721,+!p2@ELF3!1.50!30.40!ELF3;;chr8:102504651..102504683,+!p1@GRHL2!1.49!29.70!GRHL2;;chr3:189507432..189507459,+!p1@TP63!1.48!29.23!TP63;;chr6:10412600..10412637,-!p1@TFAP2A!1.44!44.07!TFAP2A;;chr6:10419768..10419819,-!p6@TFAP2A!1.43!26.16!TFAP2A;;chr2:238592039..238592054,+!p4@LRRFIP1!1.42!25.22!LRRFIP1;;chr6:126240463..126240489,+!p6@NCOA7!1.41!27.58!NCOA7;;chr16:54320675..54320715,-!p1@IRX3!1.35!45.49!IRX3;;chr5:137804405..137804444,+!p3@EGR1!1.35!25.45!EGR1;;chr15:83953397..83953425,-!p1@BNC1!1.31!22.39!BNC1;;chr5:137801160..137801176,+!p1@EGR1!1.30!1806.59!EGR1;;chr10:64576105..64576133,-!p1@EGR2!1.29!37.71!EGR2;;chr12:54785054..54785072,-!p4@ZNF385A!1.28!20.27!ZNF385A;;chr4:57547454..57547469,-!p1@HOPX!1.28!17.91!HOPX;;chr19:45971246..45971265,+!p1@FOSB!1.27!318.42!FOSB;;chr19:45908292..45908374,-!p1@PPP1R13L!1.27!150.84!PPP1R13L;;chr17:46687959..46688007,-!p2@HOXB7!1.27!24.51!HOXB7;;chr12:53625966..53626012,-!p2@RARG!1.25!43.60!RARG;;chr14:75745523..75745537,+!p1@FOS!1.24!1912.89!FOS;;chr11:129245526..129245553,+!p1@BARX2!1.23!15.79!BARX2;;chr11:65554563..65554576,+!p2@OVOL1!1.22!15.56!OVOL1;;chr14:38064429..38064486,-!p1@FOXA1!1.21!15.32!FOXA1;;chr1:3569072..3569093,+!p1@TP73!1.21!15.32!TP73;;chr1:935398..935465,-!p2@HES4!1.20!30.40!HES4;;chr17:80797863..80797874,-!p2@ZNF750!1.20!14.85!ZNF750;;chr15:101069113..101069169,-!p1@CERS3!1.19!14.61!CERS3;;chr7:27205106..27205134,-!p2@HOXA9!1.18!14.14!HOXA9;;chr7:27205136..27205164,-!p1@HOXA9!1.18!14.14!HOXA9;;chr17:7492684..7492778,-!p2@SOX15!1.17!29.23!SOX15;;chr9:102584159..102584174,+!p2@NR4A3!1.17!24.75!NR4A3;;chr20:55204351..55204377,+!p1@TFAP2C!1.17!17.68!TFAP2C;;chr5:137804357..137804390,+!p4@EGR1!1.17!16.26!EGR1;;chr6:28321909..28321965,-!p3@ZNF323!1.17!13.91!ZNF323;;chr21:40177845..40177863,+!p1@ETS2!1.16!787.22!ETS2;;chr2:46524897..46524911,+!p2@EPAS1!1.16!37.24!EPAS1;;chr2:10091815..10091864,+!p1@GRHL1!1.14!17.21!GRHL1;;chr9:102584262..102584276,+!p1@NR4A3!1.13!28.05!NR4A3;;chr6:126240356..126240379,+!p7@NCOA7!1.13!15.32!NCOA7;;chr9:100615499..100615519,+!p1@FOXE1!1.12!12.26!FOXE1;;chr10:48355030..48355090,+!p1@ZNF488!1.11!15.32!ZNF488;;chr17:46682321..46682362,-!p1@HOXB6!1.11!11.78!HOXB6;;chr3:193853927..193853944,+!p1@HES1!1.10!376.17!HES1;;chr1:212782094..212782109,+!p1@ATF3!1.09!305.46!ATF3;;chr3:128207349..128207386,-!p3@GATA2!1.07!10.84!GATA2;;chr5:137804484..137804498,+!p2@EGR1!1.06!42.66!EGR1;;chr6:106546808..106546833,+!p3@PRDM1!1.04!12.49!PRDM1;;chr5:2751785..2751808,-!p2@IRX2!1.04!9.90!IRX2;;chr1:209979375..209979386,-!p4@IRF6!1.04!9.90!IRF6;;chr19:33793430..33793447,-!p1@CEBPA!1.02!41.01!CEBPA;;chr1:164528410..164528428,+!p1@PBX1!0.98!66.23!PBX1;;chr17:38465413..38465438,+!p5@RARA!0.98!13.67!RARA;;chr6:106534230..106534254,+!p2@PRDM1!0.97!21.45!PRDM1;;chr7:1577111..1577132,+!p4@MAFK!0.97!9.43!MAFK;;chr5:134369973..134369984,-!p3@PITX1!0.97!8.25!PITX1;;chr6:28321971..28321995,-!p1@ZNF323!0.97!8.25!ZNF323;;chr16:67197654..67197716,+!p3@HSF4!0.97!8.25!HSF4;;chr20:39317868..39317884,-!p1@MAFB!0.96!98.28!MAFB;;chr3:128206762..128206781,-!p2@GATA2!0.96!51.62!GATA2;;chr6:106534192..106534224,+!p1@PRDM1!0.96!23.81!PRDM1;;chr14:75746722..75746777,+!p2@FOS!0.95!10.37!FOS;;chr13:73636252..73636307,+!p2@KLF5!0.94!8.96!KLF5;;chr6:10412576..10412599,-!p5@TFAP2A!0.94!7.78!TFAP2A;;chr2:172967621..172967637,-!p1@DLX2!0.93!20.98!DLX2;;chr2:176969097..176969109,+!p3@HOXD11!0.93!7.54!HOXD11;;chr9:96717629..96717644,-!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|fonse_cell_line=FF:0101120
|fonse_cell_line=FF:0101120
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Line 35: Line 40:
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|name=glassy cell carcinoma cell line:HOKUG
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Line 42: Line 59:
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Line 57: Line 77:
|rna_weight_ug=64.84825
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Line 69: Line 90:
|sample_ethnicity=unknown
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binding;1.88918183735924e-74!GO:0043233;organelle lumen;8.1737803606842e-73!GO:0031974;membrane-enclosed lumen;8.1737803606842e-73!GO:0005739;mitochondrion;3.63741260982418e-64!GO:0043283;biopolymer metabolic process;5.16464897928475e-53!GO:0006396;RNA processing;4.44966696187577e-49!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.92765365004833e-49!GO:0005840;ribosome;2.22607715257074e-48!GO:0043234;protein complex;1.26329297810975e-47!GO:0010467;gene expression;2.38743325760302e-47!GO:0031981;nuclear lumen;2.53784162683837e-46!GO:0006412;translation;2.75459463451767e-46!GO:0016043;cellular component organization and biogenesis;3.43465501482361e-45!GO:0019538;protein metabolic process;1.28085331455498e-43!GO:0003735;structural constituent of ribosome;1.8144192861358e-42!GO:0043228;non-membrane-bound organelle;2.42473061478959e-42!GO:0043232;intracellular non-membrane-bound organelle;2.42473061478959e-42!GO:0044429;mitochondrial part;4.43592030955656e-42!GO:0033036;macromolecule localization;7.45546709212125e-42!GO:0015031;protein transport;1.84114706935536e-41!GO:0031090;organelle membrane;2.07919085545248e-41!GO:0016071;mRNA metabolic process;2.07919085545248e-41!GO:0006259;DNA metabolic process;1.26372873109961e-39!GO:0031967;organelle envelope;3.86426423793523e-39!GO:0031975;envelope;7.33374993811849e-39!GO:0005829;cytosol;8.4838509121118e-39!GO:0044260;cellular macromolecule metabolic process;1.26536109465526e-38!GO:0044267;cellular protein metabolic process;1.43340333585525e-38!GO:0008104;protein localization;3.46075524685789e-38!GO:0008380;RNA splicing;3.88331159945509e-38!GO:0045184;establishment of protein localization;1.1048163449329e-37!GO:0033279;ribosomal subunit;7.28103383828598e-37!GO:0044249;cellular biosynthetic process;2.09155017300967e-36!GO:0006397;mRNA processing;1.5069094007805e-35!GO:0006996;organelle organization and biogenesis;2.0785344564897e-33!GO:0009058;biosynthetic process;2.32602019933697e-33!GO:0009059;macromolecule biosynthetic process;2.54375950541596e-32!GO:0046907;intracellular transport;8.7412096880047e-32!GO:0065003;macromolecular complex assembly;1.15778670715865e-31!GO:0005654;nucleoplasm;3.20988387961498e-30!GO:0003676;nucleic acid binding;6.89987991296259e-30!GO:0007049;cell cycle;7.20703936686559e-29!GO:0022607;cellular component assembly;2.44943599030034e-28!GO:0005681;spliceosome;1.14452615072265e-27!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.24362739807107e-27!GO:0006886;intracellular protein transport;6.55593108106522e-27!GO:0005740;mitochondrial envelope;2.71582378567032e-26!GO:0019866;organelle inner membrane;6.08467539532076e-26!GO:0000166;nucleotide binding;1.14463446039671e-25!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.27452181568231e-25!GO:0031966;mitochondrial membrane;4.50271049889502e-25!GO:0044451;nucleoplasm part;9.67551105239139e-25!GO:0005743;mitochondrial inner membrane;5.16516029982139e-24!GO:0016070;RNA metabolic process;2.15550760764128e-23!GO:0006974;response to DNA damage stimulus;3.15595529873468e-23!GO:0006119;oxidative phosphorylation;3.7328042655311e-22!GO:0016462;pyrophosphatase activity;3.54889378803442e-21!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.59809842009702e-21!GO:0017111;nucleoside-triphosphatase activity;4.39168894315241e-21!GO:0016817;hydrolase activity, acting on acid anhydrides;4.80304784184355e-21!GO:0044445;cytosolic part;7.70790365256078e-21!GO:0044455;mitochondrial membrane part;2.71134623095979e-20!GO:0051649;establishment of cellular localization;4.79310428840305e-20!GO:0022402;cell cycle process;6.54076926148807e-20!GO:0031980;mitochondrial lumen;1.0421034529411e-19!GO:0005759;mitochondrial matrix;1.0421034529411e-19!GO:0016874;ligase activity;1.16194025354472e-19!GO:0051641;cellular localization;1.45950592196965e-19!GO:0015934;large ribosomal subunit;1.74997713403865e-19!GO:0006281;DNA repair;2.03626372040705e-19!GO:0008134;transcription factor binding;2.82798722776308e-19!GO:0005694;chromosome;7.38704333325201e-19!GO:0005730;nucleolus;1.86755140724266e-18!GO:0015935;small ribosomal subunit;2.01969867651993e-18!GO:0006512;ubiquitin cycle;3.7204800245259e-18!GO:0006457;protein folding;8.09726919708181e-18!GO:0032553;ribonucleotide binding;1.41120741377027e-17!GO:0032555;purine ribonucleotide binding;1.41120741377027e-17!GO:0044265;cellular macromolecule catabolic process;2.41934455363018e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;3.32992753138942e-17!GO:0006260;DNA replication;4.10463999685226e-17!GO:0017076;purine nucleotide binding;4.7026859655264e-17!GO:0019941;modification-dependent protein catabolic process;6.39835342064139e-17!GO:0043632;modification-dependent macromolecule catabolic process;6.39835342064139e-17!GO:0044257;cellular protein catabolic process;1.19892170270835e-16!GO:0009719;response to endogenous stimulus;1.37564209574422e-16!GO:0005746;mitochondrial respiratory chain;1.50730036021364e-16!GO:0043285;biopolymer catabolic process;1.51431991919726e-16!GO:0006511;ubiquitin-dependent protein catabolic process;1.62585957147012e-16!GO:0051276;chromosome organization and biogenesis;1.77206866253692e-16!GO:0022618;protein-RNA complex assembly;3.51809282918374e-16!GO:0048770;pigment granule;4.7275199939888e-16!GO:0042470;melanosome;4.7275199939888e-16!GO:0044427;chromosomal part;4.7275199939888e-16!GO:0006366;transcription from RNA polymerase II promoter;5.21187106060493e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;6.42514139463191e-16!GO:0012505;endomembrane system;1.07043940495612e-15!GO:0050136;NADH dehydrogenase (quinone) activity;2.25392221440603e-15!GO:0003954;NADH dehydrogenase activity;2.25392221440603e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.25392221440603e-15!GO:0051186;cofactor metabolic process;7.60056333208846e-15!GO:0000278;mitotic cell cycle;1.17458843305433e-14!GO:0000502;proteasome complex (sensu Eukaryota);1.73044923758286e-14!GO:0005524;ATP binding;1.96004677169391e-14!GO:0005761;mitochondrial ribosome;1.97295912250676e-14!GO:0000313;organellar ribosome;1.97295912250676e-14!GO:0009057;macromolecule catabolic process;2.04366106933819e-14!GO:0044248;cellular catabolic process;2.70448947028946e-14!GO:0032559;adenyl ribonucleotide binding;3.35023875905052e-14!GO:0006605;protein targeting;5.14764705816347e-14!GO:0008135;translation factor activity, nucleic acid binding;6.46959420910167e-14!GO:0006325;establishment and/or maintenance of chromatin architecture;6.94336302793914e-14!GO:0051082;unfolded protein binding;8.02828107535191e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;9.03616641249771e-14!GO:0000375;RNA splicing, via transesterification reactions;9.03616641249771e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;9.03616641249771e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.47778324922089e-13!GO:0030554;adenyl nucleotide binding;1.5628958495978e-13!GO:0042775;organelle ATP synthesis coupled electron transport;2.25010755014738e-13!GO:0042773;ATP synthesis coupled electron transport;2.25010755014738e-13!GO:0016604;nuclear body;2.68736187378734e-13!GO:0030964;NADH dehydrogenase complex (quinone);2.94240328300812e-13!GO:0045271;respiratory chain complex I;2.94240328300812e-13!GO:0005747;mitochondrial respiratory chain complex I;2.94240328300812e-13!GO:0006323;DNA packaging;2.95704874800199e-13!GO:0030163;protein catabolic process;3.37169767451901e-13!GO:0012501;programmed cell death;3.6559283662321e-13!GO:0005635;nuclear envelope;5.27734780227912e-13!GO:0006915;apoptosis;6.42925678589041e-13!GO:0043412;biopolymer modification;8.01689974544968e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;8.40078324425335e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);9.99296065908913e-13!GO:0005783;endoplasmic reticulum;1.01014706108925e-12!GO:0048193;Golgi vesicle transport;1.41689598407559e-12!GO:0051726;regulation of cell cycle;1.74463133286764e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.90622293360647e-12!GO:0000074;regulation of progression through cell cycle;2.02874347758756e-12!GO:0005794;Golgi apparatus;2.57604301194425e-12!GO:0006732;coenzyme metabolic process;3.00608562311259e-12!GO:0016887;ATPase activity;3.08013191099329e-12!GO:0008219;cell death;6.37490276700618e-12!GO:0016265;death;6.37490276700618e-12!GO:0022403;cell cycle phase;9.66431158040143e-12!GO:0031965;nuclear membrane;9.66431158040143e-12!GO:0042254;ribosome biogenesis and assembly;1.4061611991204e-11!GO:0006913;nucleocytoplasmic transport;1.4303867808461e-11!GO:0003712;transcription cofactor activity;1.59545262886647e-11!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.75078114349343e-11!GO:0042623;ATPase activity, coupled;2.01005306566275e-11!GO:0044432;endoplasmic reticulum part;2.37277515329065e-11!GO:0044453;nuclear membrane part;3.45503305153357e-11!GO:0006464;protein modification process;3.50066481756249e-11!GO:0051169;nuclear transport;4.13640428040628e-11!GO:0043687;post-translational protein modification;4.85879500865732e-11!GO:0004386;helicase activity;8.87543287529383e-11!GO:0008639;small protein conjugating enzyme activity;9.88687817267833e-11!GO:0016607;nuclear speck;1.43229658358245e-10!GO:0003743;translation initiation factor activity;1.68708488763099e-10!GO:0004842;ubiquitin-protein ligase activity;2.27259073877146e-10!GO:0043566;structure-specific DNA binding;3.14817608991744e-10!GO:0051301;cell division;3.21792662333656e-10!GO:0000785;chromatin;3.46330698186507e-10!GO:0000087;M phase of mitotic cell cycle;4.50166687017318e-10!GO:0006413;translational initiation;4.50166687017318e-10!GO:0019787;small conjugating protein ligase activity;5.99804521210822e-10!GO:0006461;protein complex assembly;6.47567301557219e-10!GO:0005643;nuclear pore;6.97189571598236e-10!GO:0050794;regulation of cellular process;7.84019953862511e-10!GO:0007067;mitosis;8.00482162703423e-10!GO:0051188;cofactor biosynthetic process;8.81216075751998e-10!GO:0016192;vesicle-mediated transport;1.38377088375438e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.75104985286513e-09!GO:0006333;chromatin assembly or disassembly;2.02488070403023e-09!GO:0009055;electron carrier activity;2.6195954247969e-09!GO:0016568;chromatin modification;3.16261877212713e-09!GO:0000279;M phase;3.43250756647068e-09!GO:0006446;regulation of translational initiation;3.55415411043077e-09!GO:0016881;acid-amino acid ligase activity;4.20300254591011e-09!GO:0003697;single-stranded DNA binding;5.15655469400976e-09!GO:0006261;DNA-dependent DNA replication;5.40499667370421e-09!GO:0008565;protein transporter activity;5.85230593252062e-09!GO:0006357;regulation of transcription from RNA polymerase II promoter;5.93970587990436e-09!GO:0065004;protein-DNA complex assembly;6.17965852688927e-09!GO:0031324;negative regulation of cellular metabolic process;6.33484718893782e-09!GO:0050657;nucleic acid transport;6.47041953604227e-09!GO:0051236;establishment of RNA localization;6.47041953604227e-09!GO:0050658;RNA transport;6.47041953604227e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;7.11820695519491e-09!GO:0006403;RNA localization;8.54359210839202e-09!GO:0048523;negative regulation of cellular process;1.02294001190723e-08!GO:0006399;tRNA metabolic process;1.23361323430017e-08!GO:0008026;ATP-dependent helicase activity;1.34848923152281e-08!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.76227539151806e-08!GO:0017038;protein import;1.78538965595557e-08!GO:0009108;coenzyme biosynthetic process;1.93104859276293e-08!GO:0006163;purine nucleotide metabolic process;2.27160803857697e-08!GO:0005789;endoplasmic reticulum membrane;2.46799588964122e-08!GO:0009259;ribonucleotide metabolic process;3.77473878986268e-08!GO:0015986;ATP synthesis coupled proton transport;3.7957432126216e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.7957432126216e-08!GO:0015078;hydrogen ion transmembrane transporter activity;5.50133815888232e-08!GO:0045333;cellular respiration;5.74011953898393e-08!GO:0009060;aerobic respiration;5.76037080905744e-08!GO:0042981;regulation of apoptosis;5.95224741042785e-08!GO:0016469;proton-transporting two-sector ATPase complex;6.398439032514e-08!GO:0043067;regulation of programmed cell death;6.48418084735922e-08!GO:0016564;transcription repressor activity;6.55657435833172e-08!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.86759036116687e-08!GO:0005667;transcription factor complex;7.45586280375698e-08!GO:0006364;rRNA processing;7.6393074146077e-08!GO:0009892;negative regulation of metabolic process;7.95651115821343e-08!GO:0046930;pore complex;7.96202718040657e-08!GO:0006164;purine nucleotide biosynthetic process;8.10512167700128e-08!GO:0030532;small nuclear ribonucleoprotein complex;9.00081644354122e-08!GO:0016072;rRNA metabolic process;1.20852450284176e-07!GO:0009150;purine ribonucleotide metabolic process;1.41979724533001e-07!GO:0007005;mitochondrion organization and biogenesis;1.47264311434646e-07!GO:0009141;nucleoside triphosphate metabolic process;1.68034416347077e-07!GO:0032446;protein modification by small protein conjugation;1.83945890444736e-07!GO:0019829;cation-transporting ATPase activity;2.05436699480932e-07!GO:0051028;mRNA transport;2.14766646267996e-07!GO:0009260;ribonucleotide biosynthetic process;2.35675009947601e-07!GO:0065002;intracellular protein transport across a membrane;2.44570016708593e-07!GO:0016567;protein ubiquitination;2.47895687684394e-07!GO:0009199;ribonucleoside triphosphate metabolic process;2.59003698038732e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.71929877206352e-07!GO:0004812;aminoacyl-tRNA ligase activity;2.71929877206352e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.71929877206352e-07!GO:0051246;regulation of protein metabolic process;2.76564284742573e-07!GO:0003924;GTPase activity;3.09164117797411e-07!GO:0009142;nucleoside triphosphate biosynthetic process;3.14103229266964e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.14103229266964e-07!GO:0009056;catabolic process;3.22150214446245e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.7461080474035e-07!GO:0009144;purine nucleoside triphosphate metabolic process;4.7461080474035e-07!GO:0009152;purine ribonucleotide biosynthetic process;5.09013419107648e-07!GO:0006754;ATP biosynthetic process;5.24340530391341e-07!GO:0006753;nucleoside phosphate metabolic process;5.24340530391341e-07!GO:0005793;ER-Golgi intermediate compartment;5.43508728859582e-07!GO:0016787;hydrolase activity;5.45800955894491e-07!GO:0051427;hormone receptor binding;5.49655533977112e-07!GO:0005768;endosome;5.56599531800345e-07!GO:0048519;negative regulation of biological process;5.62267363371034e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;5.85038272473637e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;5.85038272473637e-07!GO:0046034;ATP metabolic process;6.07975031723249e-07!GO:0019222;regulation of metabolic process;6.29661722590973e-07!GO:0005813;centrosome;6.58657843760573e-07!GO:0043038;amino acid activation;6.6264269509196e-07!GO:0006418;tRNA aminoacylation for protein translation;6.6264269509196e-07!GO:0043039;tRNA aminoacylation;6.6264269509196e-07!GO:0015630;microtubule cytoskeleton;7.99564184331186e-07!GO:0016779;nucleotidyltransferase activity;8.23795751911015e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;8.73246626675233e-07!GO:0016481;negative regulation of transcription;1.06636002295818e-06!GO:0043069;negative regulation of programmed cell death;1.0718144593213e-06!GO:0035257;nuclear hormone receptor binding;1.2411296706877e-06!GO:0051170;nuclear import;1.39037414184735e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.42233784220007e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.49385345401826e-06!GO:0045259;proton-transporting ATP synthase complex;1.50492757826469e-06!GO:0043066;negative regulation of apoptosis;1.84081661759309e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.9260703410854e-06!GO:0045786;negative regulation of progression through cell cycle;2.1172389997419e-06!GO:0005815;microtubule organizing center;2.6607419433008e-06!GO:0000245;spliceosome assembly;2.92672506133605e-06!GO:0003713;transcription coactivator activity;3.18371690851887e-06!GO:0006099;tricarboxylic acid cycle;3.33693363757003e-06!GO:0046356;acetyl-CoA catabolic process;3.33693363757003e-06!GO:0016563;transcription activator activity;3.93226498744085e-06!GO:0006334;nucleosome assembly;3.98343054712959e-06!GO:0031497;chromatin assembly;4.15852043955514e-06!GO:0006606;protein import into nucleus;4.43990959568577e-06!GO:0005657;replication fork;5.72946392501181e-06!GO:0006752;group transfer coenzyme metabolic process;6.12678772646838e-06!GO:0003690;double-stranded DNA binding;6.39292564065137e-06!GO:0050789;regulation of biological process;6.78396626857611e-06!GO:0005819;spindle;7.5024180948944e-06!GO:0005525;GTP binding;8.11082209958836e-06!GO:0000151;ubiquitin ligase complex;8.23643953896032e-06!GO:0030120;vesicle coat;9.4626418379367e-06!GO:0030662;coated vesicle membrane;9.4626418379367e-06!GO:0005762;mitochondrial large ribosomal subunit;1.00584126449598e-05!GO:0000315;organellar large ribosomal subunit;1.00584126449598e-05!GO:0009109;coenzyme catabolic process;1.06652921525716e-05!GO:0051187;cofactor catabolic process;1.32742994383043e-05!GO:0048475;coated membrane;1.35714622759118e-05!GO:0030117;membrane coat;1.35714622759118e-05!GO:0003714;transcription corepressor activity;1.43726274171548e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.4504811777113e-05!GO:0006793;phosphorus metabolic process;1.47763101155426e-05!GO:0006796;phosphate metabolic process;1.47763101155426e-05!GO:0005839;proteasome core complex (sensu Eukaryota);1.63529799538382e-05!GO:0006084;acetyl-CoA metabolic process;1.73219240715575e-05!GO:0006916;anti-apoptosis;1.74552007399961e-05!GO:0009117;nucleotide metabolic process;1.96192906227359e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.98107734520732e-05!GO:0003682;chromatin binding;2.83103766503856e-05!GO:0008094;DNA-dependent ATPase activity;3.11138118306796e-05!GO:0051329;interphase of mitotic cell cycle;3.34461252070888e-05!GO:0005773;vacuole;3.63113083983196e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.82132348081287e-05!GO:0007264;small GTPase mediated signal transduction;3.87890012691032e-05!GO:0003724;RNA helicase activity;4.27370303428666e-05!GO:0043623;cellular protein complex assembly;4.27370303428666e-05!GO:0006613;cotranslational protein targeting to membrane;4.65176365095324e-05!GO:0007051;spindle organization and biogenesis;5.2683537547538e-05!GO:0004298;threonine endopeptidase activity;5.41577404832998e-05!GO:0051325;interphase;5.4423309405507e-05!GO:0000075;cell cycle checkpoint;5.6881247572427e-05!GO:0006888;ER to Golgi vesicle-mediated transport;6.02863054550429e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;6.10969930160285e-05!GO:0031323;regulation of cellular metabolic process;7.23880962127754e-05!GO:0031988;membrane-bound vesicle;9.12412896908198e-05!GO:0051168;nuclear export;9.15089688047916e-05!GO:0044440;endosomal part;9.37745668285583e-05!GO:0010008;endosome membrane;9.37745668285583e-05!GO:0044431;Golgi apparatus part;0.000102708942763144!GO:0005770;late endosome;0.000104624420647683!GO:0000314;organellar small ribosomal subunit;0.000105573227893984!GO:0005763;mitochondrial small ribosomal subunit;0.000105573227893984!GO:0000775;chromosome, pericentric region;0.000107906064938441!GO:0016023;cytoplasmic membrane-bound vesicle;0.000114027444252785!GO:0032561;guanyl ribonucleotide binding;0.000125009912033196!GO:0019001;guanyl nucleotide binding;0.000125009912033196!GO:0016740;transferase activity;0.000143128188527996!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000147925287529978!GO:0003729;mRNA binding;0.000153740681309054!GO:0045893;positive regulation of transcription, DNA-dependent;0.000175336765790921!GO:0048471;perinuclear region of cytoplasm;0.000175794242241719!GO:0045892;negative regulation of transcription, DNA-dependent;0.000176077468829824!GO:0045454;cell redox homeostasis;0.0001800294420598!GO:0006302;double-strand break repair;0.0001800294420598!GO:0006350;transcription;0.000180803288007378!GO:0008654;phospholipid biosynthetic process;0.000186932989852547!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000206481028264995!GO:0003899;DNA-directed RNA polymerase activity;0.000208792705966044!GO:0048522;positive regulation of cellular process;0.000214523853255398!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000219018430253553!GO:0000323;lytic vacuole;0.000226215811384172!GO:0005764;lysosome;0.000226215811384172!GO:0043021;ribonucleoprotein binding;0.000237637637074151!GO:0051052;regulation of DNA metabolic process;0.000238349007612957!GO:0006402;mRNA catabolic process;0.000245506506571085!GO:0005798;Golgi-associated vesicle;0.000256185264495788!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000257807963731646!GO:0031252;leading edge;0.00028646676286219!GO:0016310;phosphorylation;0.00029617520819422!GO:0042802;identical protein binding;0.000312776445685148!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000313670772080986!GO:0031982;vesicle;0.000333455523319104!GO:0065009;regulation of a molecular function;0.000351696578019702!GO:0005788;endoplasmic reticulum lumen;0.000373115034037012!GO:0015980;energy derivation by oxidation of organic compounds;0.000395445499874537!GO:0003684;damaged DNA binding;0.000395445499874537!GO:0008186;RNA-dependent ATPase activity;0.000429115955355833!GO:0006950;response to stress;0.00047446276516256!GO:0030867;rough endoplasmic reticulum membrane;0.000482845050564966!GO:0051789;response to protein stimulus;0.000555139237382633!GO:0006986;response to unfolded protein;0.000555139237382633!GO:0006383;transcription from RNA polymerase III promoter;0.000555139237382633!GO:0031410;cytoplasmic vesicle;0.000555911809573776!GO:0032508;DNA duplex unwinding;0.000562807553389017!GO:0032392;DNA geometric change;0.000562807553389017!GO:0016491;oxidoreductase activity;0.000591643833035198!GO:0006091;generation of precursor metabolites and energy;0.000618646378550872!GO:0019899;enzyme binding;0.000630900849590024!GO:0030036;actin cytoskeleton organization and biogenesis;0.000668676225682073!GO:0010468;regulation of gene expression;0.000755815702551347!GO:0008250;oligosaccharyl transferase complex;0.000755815702551347!GO:0033116;ER-Golgi intermediate compartment membrane;0.000763839665517709!GO:0006401;RNA catabolic process;0.000763902568120449!GO:0045941;positive regulation of transcription;0.000767160663012031!GO:0003702;RNA polymerase II transcription factor activity;0.000771144066710504!GO:0008632;apoptotic program;0.000778370766235144!GO:0000776;kinetochore;0.000844645045205819!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000932986529530412!GO:0005885;Arp2/3 protein complex;0.000959952739521142!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000991286183347237!GO:0051101;regulation of DNA binding;0.0010195044441228!GO:0006414;translational elongation;0.0010195044441228!GO:0035258;steroid hormone receptor binding;0.00103608738559233!GO:0004576;oligosaccharyl transferase activity;0.00105376661691984!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00111985384598923!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00116387952522539!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00116387952522539!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00116387952522539!GO:0016859;cis-trans isomerase activity;0.00119637900336629!GO:0051920;peroxiredoxin activity;0.00120491071527207!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00121391062988558!GO:0000228;nuclear chromosome;0.00122459198469998!GO:0004004;ATP-dependent RNA helicase activity;0.00123237928032498!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.001257182908415!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0012989787885158!GO:0006268;DNA unwinding during replication;0.00133363172388521!GO:0051252;regulation of RNA metabolic process;0.00137486487701235!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00139324460720114!GO:0046983;protein dimerization activity;0.0014343401133877!GO:0005048;signal sequence binding;0.0014343401133877!GO:0022890;inorganic cation transmembrane transporter activity;0.00145824246249779!GO:0007010;cytoskeleton organization and biogenesis;0.00149704175034725!GO:0042770;DNA damage response, signal transduction;0.00154599645644229!GO:0031072;heat shock protein binding;0.00159720012362509!GO:0005769;early endosome;0.00162388943732912!GO:0003678;DNA helicase activity;0.00165332101331195!GO:0000139;Golgi membrane;0.00167792122042365!GO:0000786;nucleosome;0.00170010421283212!GO:0007052;mitotic spindle organization and biogenesis;0.00174405574954306!GO:0005684;U2-dependent spliceosome;0.00181426671852123!GO:0006352;transcription initiation;0.00183688202335923!GO:0016197;endosome transport;0.0018568066276649!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00199500027206677!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00199500027206677!GO:0046489;phosphoinositide biosynthetic process;0.00200596224834!GO:0006612;protein targeting to membrane;0.00202693303961612!GO:0007243;protein kinase cascade;0.00208562811716342!GO:0009165;nucleotide biosynthetic process;0.00227145861915274!GO:0016791;phosphoric monoester hydrolase activity;0.00262274393410884!GO:0004527;exonuclease activity;0.00263840835311372!GO:0006611;protein export from nucleus;0.00263840835311372!GO:0003746;translation elongation factor activity;0.00279608480407862!GO:0030521;androgen receptor signaling pathway;0.0028195212890629!GO:0030132;clathrin coat of coated pit;0.00282615843948594!GO:0043596;nuclear replication fork;0.00289177620985443!GO:0000792;heterochromatin;0.0028938425170222!GO:0065007;biological regulation;0.00289396103243621!GO:0006284;base-excision repair;0.00291144715704105!GO:0008033;tRNA processing;0.00302502184970016!GO:0006310;DNA recombination;0.00305168727255452!GO:0032774;RNA biosynthetic process;0.00307645960463209!GO:0006270;DNA replication initiation;0.00320602307830901!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00323411900677325!GO:0006839;mitochondrial transport;0.00323856716877983!GO:0046483;heterocycle metabolic process;0.003261526487254!GO:0048500;signal recognition particle;0.0032707713477626!GO:0046474;glycerophospholipid biosynthetic process;0.00340381253313352!GO:0043681;protein import into mitochondrion;0.0036574400968832!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00368686330806928!GO:0006351;transcription, DNA-dependent;0.00368751960893447!GO:0006892;post-Golgi vesicle-mediated transport;0.00391722255250633!GO:0008629;induction of apoptosis by intracellular signals;0.00400084910360847!GO:0016363;nuclear matrix;0.0040082840565883!GO:0000049;tRNA binding;0.00418757794047562!GO:0008022;protein C-terminus binding;0.00424011207462262!GO:0006891;intra-Golgi vesicle-mediated transport;0.00432111731073534!GO:0006338;chromatin remodeling;0.00444533498890549!GO:0006354;RNA elongation;0.00453470612782408!GO:0005876;spindle microtubule;0.00457034229052348!GO:0008361;regulation of cell size;0.00465597862137679!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00484741275867131!GO:0051098;regulation of binding;0.00488451362569932!GO:0030137;COPI-coated vesicle;0.00491389361677308!GO:0006626;protein targeting to mitochondrion;0.0050623989986602!GO:0001558;regulation of cell growth;0.00509362412097058!GO:0008234;cysteine-type peptidase activity;0.0052106930126273!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00533025312898582!GO:0005905;coated pit;0.00533025312898582!GO:0030663;COPI coated vesicle membrane;0.00533025312898582!GO:0030126;COPI vesicle coat;0.00533025312898582!GO:0006979;response to oxidative stress;0.00534012483181943!GO:0016251;general RNA polymerase II transcription factor activity;0.00536431690182924!GO:0016272;prefoldin complex;0.00540472388729353!GO:0030880;RNA polymerase complex;0.00562906801606012!GO:0030118;clathrin coat;0.00571138634515404!GO:0003711;transcription elongation regulator activity;0.00571138634515404!GO:0005791;rough endoplasmic reticulum;0.00580028761541689!GO:0030029;actin filament-based process;0.00582854714397023!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00584237340979623!GO:0007088;regulation of mitosis;0.00605238744434688!GO:0015992;proton transport;0.0062156277091447!GO:0044452;nucleolar part;0.00624483291541494!GO:0016853;isomerase activity;0.00648891275668793!GO:0005637;nuclear inner membrane;0.00669089755612666!GO:0048487;beta-tubulin binding;0.00675994098650358!GO:0046966;thyroid hormone receptor binding;0.00681613801884281!GO:0008139;nuclear localization sequence binding;0.00690824130588114!GO:0007050;cell cycle arrest;0.00697566831026492!GO:0016049;cell growth;0.00732048618300901!GO:0019843;rRNA binding;0.0073353775946019!GO:0050681;androgen receptor binding;0.0073716030707055!GO:0044454;nuclear chromosome part;0.00743967980398376!GO:0043488;regulation of mRNA stability;0.00751046631354641!GO:0043487;regulation of RNA stability;0.00751046631354641!GO:0018196;peptidyl-asparagine modification;0.00756121397014714!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00756121397014714!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00757540730402819!GO:0015002;heme-copper terminal oxidase activity;0.00757540730402819!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00757540730402819!GO:0004129;cytochrome-c oxidase activity;0.00757540730402819!GO:0008312;7S RNA binding;0.00767201001315784!GO:0006818;hydrogen transport;0.00768227113886804!GO:0040029;regulation of gene expression, epigenetic;0.00769522738595401!GO:0004674;protein serine/threonine kinase activity;0.00775075757807436!GO:0008287;protein serine/threonine phosphatase complex;0.0079068784925823!GO:0006672;ceramide metabolic process;0.00800040282046471!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00830138916110934!GO:0016741;transferase activity, transferring one-carbon groups;0.00830138916110934!GO:0033673;negative regulation of kinase activity;0.00849005256479541!GO:0006469;negative regulation of protein kinase activity;0.00849005256479541!GO:0030384;phosphoinositide metabolic process;0.00855873116350372!GO:0006405;RNA export from nucleus;0.0087923893447968!GO:0006289;nucleotide-excision repair;0.00883859726261624!GO:0006275;regulation of DNA replication;0.00892649515136855!GO:0008092;cytoskeletal protein binding;0.00916156265251349!GO:0008601;protein phosphatase type 2A regulator activity;0.00917012660503204!GO:0004518;nuclease activity;0.0092888055043731!GO:0030176;integral to endoplasmic reticulum membrane;0.009413171297714!GO:0008168;methyltransferase activity;0.00945902703908076!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00951013652640133!GO:0015399;primary active transmembrane transporter activity;0.00951013652640133!GO:0050662;coenzyme binding;0.00968608440983306!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00976811182166234!GO:0009116;nucleoside metabolic process;0.00987744835221225!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00990285285765544!GO:0045047;protein targeting to ER;0.00990285285765544!GO:0003725;double-stranded RNA binding;0.00999476924833191!GO:0050790;regulation of catalytic activity;0.0100048676609899!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0100048676609899!GO:0051087;chaperone binding;0.010237649023986!GO:0001726;ruffle;0.0102999054884592!GO:0000082;G1/S transition of mitotic cell cycle;0.0103818806984494!GO:0043601;nuclear replisome;0.0108817051567251!GO:0030894;replisome;0.0108817051567251!GO:0042393;histone binding;0.01090044410614!GO:0007006;mitochondrial membrane organization and biogenesis;0.0111685730817383!GO:0000059;protein import into nucleus, docking;0.0112071729283591!GO:0030119;AP-type membrane coat adaptor complex;0.0113155528505712!GO:0051128;regulation of cellular component organization and biogenesis;0.0113342820888362!GO:0016584;nucleosome positioning;0.0113342820888362!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0115455586943318!GO:0000428;DNA-directed RNA polymerase complex;0.0115455586943318!GO:0048518;positive regulation of biological process;0.0117171946917336!GO:0051540;metal cluster binding;0.0120019234772991!GO:0051536;iron-sulfur cluster binding;0.0120019234772991!GO:0048468;cell development;0.012247615804869!GO:0046519;sphingoid metabolic process;0.0124591134090803!GO:0045449;regulation of transcription;0.0125785528384593!GO:0030131;clathrin adaptor complex;0.0125883783603723!GO:0000159;protein phosphatase type 2A complex;0.0127715208238964!GO:0015631;tubulin binding;0.0128264005037539!GO:0043433;negative regulation of transcription factor activity;0.0130457305734676!GO:0004721;phosphoprotein phosphatase activity;0.0130730078260917!GO:0016044;membrane organization and biogenesis;0.0132045868948077!GO:0019867;outer membrane;0.0135911185590615!GO:0043065;positive regulation of apoptosis;0.0139305822297277!GO:0008637;apoptotic mitochondrial changes;0.0140695114396037!GO:0031968;organelle outer membrane;0.0144348736437103!GO:0030518;steroid hormone receptor signaling pathway;0.0144571701068915!GO:0046467;membrane lipid biosynthetic process;0.0145014895392472!GO:0009967;positive regulation of signal transduction;0.0145692751164772!GO:0016311;dephosphorylation;0.0145729475371867!GO:0000790;nuclear chromatin;0.0147908835340021!GO:0005741;mitochondrial outer membrane;0.0149477388919118!GO:0006506;GPI anchor biosynthetic process;0.0152834714437633!GO:0051348;negative regulation of transferase activity;0.0153534277547949!GO:0031124;mRNA 3'-end processing;0.0154745691836351!GO:0043284;biopolymer biosynthetic process;0.0155936044889379!GO:0032200;telomere organization and biogenesis;0.0155936044889379!GO:0000723;telomere maintenance;0.0155936044889379!GO:0017166;vinculin binding;0.0157951657182607!GO:0000339;RNA cap binding;0.0158336383151802!GO:0030027;lamellipodium;0.0161690798757618!GO:0006376;mRNA splice site selection;0.0162028834795296!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0162028834795296!GO:0051287;NAD binding;0.0162028834795296!GO:0004860;protein kinase inhibitor activity;0.0163250751236374!GO:0043068;positive regulation of programmed cell death;0.0166283616554811!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0169036644286011!GO:0006733;oxidoreduction coenzyme metabolic process;0.0172022395172937!GO:0007040;lysosome organization and biogenesis;0.0176535217804686!GO:0006650;glycerophospholipid metabolic process;0.0180623565457609!GO:0030133;transport vesicle;0.0188881095693752!GO:0048037;cofactor binding;0.0189996330313955!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0192667137809099!GO:0005874;microtubule;0.0192667137809099!GO:0009112;nucleobase metabolic process;0.0193299803140594!GO:0043022;ribosome binding;0.0193741902829136!GO:0005869;dynactin complex;0.0197536824279612!GO:0006505;GPI anchor metabolic process;0.0199832173963878!GO:0042026;protein refolding;0.0200613378025561!GO:0046822;regulation of nucleocytoplasmic transport;0.0203392505925292!GO:0000922;spindle pole;0.0206491178814878!GO:0006417;regulation of translation;0.0210050493291423!GO:0007265;Ras protein signal transduction;0.0219203778480035!GO:0005832;chaperonin-containing T-complex;0.0223522097957597!GO:0008180;signalosome;0.0227622754523318!GO:0005856;cytoskeleton;0.0229607823614464!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0231301492926565!GO:0006144;purine base metabolic process;0.0236027193025624!GO:0051338;regulation of transferase activity;0.0237616944757025!GO:0019783;small conjugating protein-specific protease activity;0.0237616944757025!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0239890456474184!GO:0000086;G2/M transition of mitotic cell cycle;0.0240222335018517!GO:0022415;viral reproductive process;0.0241136452216764!GO:0005862;muscle thin filament tropomyosin;0.0241538402776592!GO:0007017;microtubule-based process;0.024154941716631!GO:0030031;cell projection biogenesis;0.024154941716631!GO:0008408;3'-5' exonuclease activity;0.0248827251788789!GO:0031529;ruffle organization and biogenesis;0.0251670313353992!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0255587110628442!GO:0043414;biopolymer methylation;0.025636605003199!GO:0030658;transport vesicle membrane;0.0256744973901858!GO:0006595;polyamine metabolic process;0.0257575306097198!GO:0005669;transcription factor TFIID complex;0.0258110838975181!GO:0045792;negative regulation of cell size;0.0263309516672984!GO:0007093;mitotic cell cycle checkpoint;0.0272726668138088!GO:0000781;chromosome, telomeric region;0.0274605079981016!GO:0019752;carboxylic acid metabolic process;0.0277886044612112!GO:0045113;regulation of integrin biosynthetic process;0.0277886044612112!GO:0045112;integrin biosynthetic process;0.0277886044612112!GO:0006607;NLS-bearing substrate import into nucleus;0.0278291021832505!GO:0031625;ubiquitin protein ligase binding;0.027945073679202!GO:0043492;ATPase activity, coupled to movement of substances;0.029062354522317!GO:0030308;negative regulation of cell growth;0.0291937514360427!GO:0043154;negative regulation of caspase activity;0.0294222230679499!GO:0004722;protein serine/threonine phosphatase activity;0.0294992412365168!GO:0006082;organic acid metabolic process;0.0296905572850761!GO:0030125;clathrin vesicle coat;0.0300517856190521!GO:0030665;clathrin coated vesicle membrane;0.0300517856190521!GO:0000096;sulfur amino acid metabolic process;0.0300606392932643!GO:0005720;nuclear heterochromatin;0.0307740163369293!GO:0007059;chromosome segregation;0.0315367309379813!GO:0045045;secretory pathway;0.031832507139501!GO:0030911;TPR domain binding;0.0321705009554581!GO:0004843;ubiquitin-specific protease activity;0.0331481133619049!GO:0031901;early endosome membrane;0.0333146989266143!GO:0043549;regulation of kinase activity;0.0333167361635658!GO:0009303;rRNA transcription;0.0336941073743711!GO:0005938;cell cortex;0.0343263491402699!GO:0008426;protein kinase C inhibitor activity;0.0343263491402699!GO:0006497;protein amino acid lipidation;0.0345050950328285!GO:0004532;exoribonuclease activity;0.0346924617927192!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0346924617927192!GO:0003677;DNA binding;0.034732352918731!GO:0009119;ribonucleoside metabolic process;0.034732352918731!GO:0000123;histone acetyltransferase complex;0.034732352918731!GO:0031570;DNA integrity checkpoint;0.0349341896543934!GO:0007004;telomere maintenance via telomerase;0.0351795009835721!GO:0008630;DNA damage response, signal transduction resulting in induction of apoptosis;0.035467173939061!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0369900303448836!GO:0050178;phenylpyruvate tautomerase activity;0.0370546749894181!GO:0022408;negative regulation of cell-cell adhesion;0.0371578510929516!GO:0007033;vacuole organization and biogenesis;0.0372430159326851!GO:0006509;membrane protein ectodomain proteolysis;0.0375217225671207!GO:0033619;membrane protein proteolysis;0.0375217225671207!GO:0004300;enoyl-CoA hydratase activity;0.0376299390604323!GO:0030433;ER-associated protein catabolic process;0.0387364123180776!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0387364123180776!GO:0031326;regulation of cellular biosynthetic process;0.0390330590671676!GO:0046982;protein heterodimerization activity;0.0394645342539301!GO:0032507;maintenance of cellular protein localization;0.0395478882120496!GO:0030503;regulation of cell redox homeostasis;0.039582925748209!GO:0035267;NuA4 histone acetyltransferase complex;0.0400584722328305!GO:0051053;negative regulation of DNA metabolic process;0.0401778164158271!GO:0006767;water-soluble vitamin metabolic process;0.0405746430947617!GO:0050811;GABA receptor binding;0.0410299865061425!GO:0046128;purine ribonucleoside metabolic process;0.0411902366900516!GO:0042278;purine nucleoside metabolic process;0.0411902366900516!GO:0031532;actin cytoskeleton reorganization;0.0414341238603131!GO:0005758;mitochondrial intermembrane space;0.0418874360940354!GO:0016126;sterol biosynthetic process;0.0422358189913132!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0422358189913132!GO:0004003;ATP-dependent DNA helicase activity;0.0422604049259437!GO:0043189;H4/H2A histone acetyltransferase complex;0.0423401672360998!GO:0030659;cytoplasmic vesicle membrane;0.04289139087463!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0429274883033661!GO:0051059;NF-kappaB binding;0.0432440607701346!GO:0004563;beta-N-acetylhexosaminidase activity;0.0432440607701346!GO:0004448;isocitrate dehydrogenase activity;0.0432860572144549!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0433484882882049!GO:0008652;amino acid biosynthetic process;0.0433484882882049!GO:0017134;fibroblast growth factor binding;0.0433906718253824!GO:0043624;cellular protein complex disassembly;0.043769526077065!GO:0022406;membrane docking;0.0444680991205673!GO:0048278;vesicle docking;0.0444680991205673!GO:0000725;recombinational repair;0.0445419519286281!GO:0000724;double-strand break repair via homologous recombination;0.0445419519286281!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0446177493385891!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.04463250478802!GO:0031371;ubiquitin conjugating enzyme complex;0.04463250478802!GO:0043281;regulation of caspase activity;0.0446542847753532!GO:0040008;regulation of growth;0.0446542847753532!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0451140957496849!GO:0010257;NADH dehydrogenase complex assembly;0.0451140957496849!GO:0033108;mitochondrial respiratory chain complex assembly;0.0451140957496849!GO:0001836;release of cytochrome c from mitochondria;0.0451140957496849!GO:0031902;late endosome membrane;0.0453980990376388!GO:0000209;protein polyubiquitination;0.0456507601514806!GO:0051539;4 iron, 4 sulfur cluster binding;0.0463615181025239!GO:0047485;protein N-terminus binding;0.0466739614266395!GO:0030660;Golgi-associated vesicle membrane;0.0468639351713041!GO:0000805;X chromosome;0.0475304940056368!GO:0001740;Barr body;0.0475304940056368!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0479133767643343!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0484766761419447!GO:0005784;translocon complex;0.0485646972354452!GO:0008538;proteasome activator activity;0.0495598906680584!GO:0007242;intracellular signaling cascade;0.0496089683555566
|sample_id=10688
|sample_id=10688
|sample_note=
|sample_note=
Line 76: Line 98:
|sample_tissue=cervix
|sample_tissue=cervix
|top_motifs=VSX1,2:2.43311710967;SNAI1..3:2.07891899345;ZEB1:1.89268899318;TP53:1.43891256011;NKX2-1,4:1.259895858;MYOD1:1.21607986714;E2F1..5:1.20473689113;NKX2-3_NKX2-5:1.15612804159;ELK1,4_GABP{A,B1}:1.03760965756;MTF1:0.938779650278;TFDP1:0.911588404813;TBX4,5:0.892461820636;FOXN1:0.888770767152;XCPE1{core}:0.849356144128;PITX1..3:0.839592944707;PDX1:0.819904566172;FOXQ1:0.804166007695;TEAD1:0.78489675519;PPARG:0.75132844999;RBPJ:0.742418889583;DBP:0.7381000553;TFAP2{A,C}:0.734393896986;HOXA9_MEIS1:0.715551910117;CEBPA,B_DDIT3:0.609372736105;ESR1:0.547684989217;CDC5L:0.545016467454;ZNF148:0.525370403472;POU1F1:0.502192667339;PAX1,9:0.502003335879;MED-1{core}:0.478864005468;NR6A1:0.463175858352;BREu{core}:0.41591279161;POU6F1:0.399175882644;FOX{F1,F2,J1}:0.353566756254;SP1:0.350450045862;NFE2:0.33797086077;IRF7:0.326162737969;FOS_FOS{B,L1}_JUN{B,D}:0.318414390218;TFAP2B:0.305349786428;NR5A1,2:0.301160735952;NKX6-1,2:0.299514957823;ONECUT1,2:0.297216435246;NKX3-2:0.245069472361;HOX{A6,A7,B6,B7}:0.237437711607;ZNF423:0.234977857323;TLX2:0.23173456215;NRF1:0.22489882731;FOXO1,3,4:0.220464888973;RFX1:0.192891993561;RORA:0.191386359251;EBF1:0.17676785243;OCT4_SOX2{dimer}:0.176225598257;HOX{A4,D4}:0.172723832446;TLX1..3_NFIC{dimer}:0.166710588463;ZFP161:0.161960900514;TEF:0.161314518451;FOXP1:0.14152365309;FOX{I1,J2}:0.13530281936;ADNP_IRX_SIX_ZHX:0.13451331526;ATF4:0.128381914534;HBP1_HMGB_SSRP1_UBTF:0.0990424433049;RFX2..5_RFXANK_RFXAP:0.0912363492131;TFCP2:0.0909006334601;HLF:0.0765784090648;ZNF143:0.0708846280738;ESRRA:0.0697975618821;ZBTB16:0.0620961264966;PAX4:0.0564427952808;BACH2:0.0466268401374;YY1:0.0414507856269;ZBTB6:0.0410900824819;ARID5B:0.0363521668907;FOXL1:0.0335738621843;TAL1_TCF{3,4,12}:0.00849160327143;LMO2:0.00265846789595;NFY{A,B,C}:-0.000320757495958;FOXM1:-0.0126410877233;MYB:-0.0158814123352;ATF2:-0.0194012936572;IKZF2:-0.0299009906233;HIC1:-0.0561245428934;EGR1..3:-0.0593227291719;CREB1:-0.061125010279;IKZF1:-0.0699460574621;HNF4A_NR2F1,2:-0.0747978873009;NFIL3:-0.076022324001;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.0760303678144;SOX5:-0.0797665616685;GLI1..3:-0.0923427082352;ALX4:-0.113771875593;PAX2:-0.127255376636;UFEwm:-0.130728952071;CDX1,2,4:-0.131238015674;FOSL2:-0.139019068898;MAZ:-0.141688971472;PAX3,7:-0.141973325023;HMGA1,2:-0.148212938441;POU2F1..3:-0.148651110687;CRX:-0.158006686148;GFI1:-0.15816831441;TBP:-0.158479515671;ELF1,2,4:-0.159489161854;HOX{A5,B5}:-0.172673453338;GZF1:-0.176687292261;NFE2L2:-0.177120297407;MTE{core}:-0.179003651619;HNF1A:-0.179808471341;ATF5_CREB3:-0.184927501327;bHLH_family:-0.188761627291;PRRX1,2:-0.206843474242;POU5F1:-0.208010915583;GTF2A1,2:-0.223838478085;KLF4:-0.226388299816;EP300:-0.230301749537;ZIC1..3:-0.237769099034;HAND1,2:-0.244542769442;JUN:-0.244827744229;HIF1A:-0.246092308673;PBX1:-0.246932836156;STAT2,4,6:-0.252171194547;MEF2{A,B,C,D}:-0.265318694163;ZNF384:-0.298494569375;LEF1_TCF7_TCF7L1,2:-0.314383147308;SOX{8,9,10}:-0.351892709176;NANOG:-0.367878546485;RREB1:-0.369979701361;FOX{D1,D2}:-0.373851403155;LHX3,4:-0.382903430605;MAFB:-0.383729395158;GFI1B:-0.393855488431;REST:-0.39401786272;BPTF:-0.423600551732;GTF2I:-0.427109803797;TOPORS:-0.428680769902;IRF1,2:-0.443262538971;ALX1:-0.468416357278;NFKB1_REL_RELA:-0.473158318964;GATA6:-0.473938384105;NR1H4:-0.475701180943;MYBL2:-0.495738895434;CUX2:-0.502510203409;HES1:-0.534144581788;AHR_ARNT_ARNT2:-0.547136611474;NHLH1,2:-0.547462525477;AIRE:-0.551360324902;SRF:-0.556000760924;ETS1,2:-0.559212159857;T:-0.577360559771;MZF1:-0.605214843662;FOXP3:-0.60979008914;SOX2:-0.650990050687;TFAP4:-0.651609283418;STAT5{A,B}:-0.65877234523;RUNX1..3:-0.668149139679;SPI1:-0.669106388591;SPIB:-0.674763894969;EN1,2:-0.682016400867;PRDM1:-0.68681246168;SOX17:-0.686886218717;PATZ1:-0.761188765564;HSF1,2:-0.765892158329;PAX5:-0.767463257028;NKX3-1:-0.78472708003;NR3C1:-0.786826699982;AR:-0.788016014508;FOXD3:-0.792870469474;SREBF1,2:-0.795998522077;EVI1:-0.802100140348;NFIX:-0.8490883036;STAT1,3:-0.862857762217;RXR{A,B,G}:-0.870985218546;POU3F1..4:-0.91420404218;NKX2-2,8:-0.914342814053;DMAP1_NCOR{1,2}_SMARC:-0.952960053342;MYFfamily:-0.960252326759;PAX8:-0.961935753526;ATF6:-0.974133126094;FOXA2:-1.01333378699;TGIF1:-1.1003322386;PAX6:-1.11680446664;GCM1,2:-1.2030405576;NFE2L1:-1.23286941196;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.25905776343;RXRA_VDR{dimer}:-1.31948990495;ZNF238:-1.3292264949;SPZ1:-1.39931277481;SMAD1..7,9:-1.41946829285;GATA4:-1.46331672739;HMX1:-1.46488181891;NANOG{mouse}:-1.62506683013;NFATC1..3:-1.63783159655;XBP1:-1.68544342492
|top_motifs=VSX1,2:2.43311710967;SNAI1..3:2.07891899345;ZEB1:1.89268899318;TP53:1.43891256011;NKX2-1,4:1.259895858;MYOD1:1.21607986714;E2F1..5:1.20473689113;NKX2-3_NKX2-5:1.15612804159;ELK1,4_GABP{A,B1}:1.03760965756;MTF1:0.938779650278;TFDP1:0.911588404813;TBX4,5:0.892461820636;FOXN1:0.888770767152;XCPE1{core}:0.849356144128;PITX1..3:0.839592944707;PDX1:0.819904566172;FOXQ1:0.804166007695;TEAD1:0.78489675519;PPARG:0.75132844999;RBPJ:0.742418889583;DBP:0.7381000553;TFAP2{A,C}:0.734393896986;HOXA9_MEIS1:0.715551910117;CEBPA,B_DDIT3:0.609372736105;ESR1:0.547684989217;CDC5L:0.545016467454;ZNF148:0.525370403472;POU1F1:0.502192667339;PAX1,9:0.502003335879;MED-1{core}:0.478864005468;NR6A1:0.463175858352;BREu{core}:0.41591279161;POU6F1:0.399175882644;FOX{F1,F2,J1}:0.353566756254;SP1:0.350450045862;NFE2:0.33797086077;IRF7:0.326162737969;FOS_FOS{B,L1}_JUN{B,D}:0.318414390218;TFAP2B:0.305349786428;NR5A1,2:0.301160735952;NKX6-1,2:0.299514957823;ONECUT1,2:0.297216435246;NKX3-2:0.245069472361;HOX{A6,A7,B6,B7}:0.237437711607;ZNF423:0.234977857323;TLX2:0.23173456215;NRF1:0.22489882731;FOXO1,3,4:0.220464888973;RFX1:0.192891993561;RORA:0.191386359251;EBF1:0.17676785243;OCT4_SOX2{dimer}:0.176225598257;HOX{A4,D4}:0.172723832446;TLX1..3_NFIC{dimer}:0.166710588463;ZFP161:0.161960900514;TEF:0.161314518451;FOXP1:0.14152365309;FOX{I1,J2}:0.13530281936;ADNP_IRX_SIX_ZHX:0.13451331526;ATF4:0.128381914534;HBP1_HMGB_SSRP1_UBTF:0.0990424433049;RFX2..5_RFXANK_RFXAP:0.0912363492131;TFCP2:0.0909006334601;HLF:0.0765784090648;ZNF143:0.0708846280738;ESRRA:0.0697975618821;ZBTB16:0.0620961264966;PAX4:0.0564427952808;BACH2:0.0466268401374;YY1:0.0414507856269;ZBTB6:0.0410900824819;ARID5B:0.0363521668907;FOXL1:0.0335738621843;TAL1_TCF{3,4,12}:0.00849160327143;LMO2:0.00265846789595;NFY{A,B,C}:-0.000320757495958;FOXM1:-0.0126410877233;MYB:-0.0158814123352;ATF2:-0.0194012936572;IKZF2:-0.0299009906233;HIC1:-0.0561245428934;EGR1..3:-0.0593227291719;CREB1:-0.061125010279;IKZF1:-0.0699460574621;HNF4A_NR2F1,2:-0.0747978873009;NFIL3:-0.076022324001;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.0760303678144;SOX5:-0.0797665616685;GLI1..3:-0.0923427082352;ALX4:-0.113771875593;PAX2:-0.127255376636;UFEwm:-0.130728952071;CDX1,2,4:-0.131238015674;FOSL2:-0.139019068898;MAZ:-0.141688971472;PAX3,7:-0.141973325023;HMGA1,2:-0.148212938441;POU2F1..3:-0.148651110687;CRX:-0.158006686148;GFI1:-0.15816831441;TBP:-0.158479515671;ELF1,2,4:-0.159489161854;HOX{A5,B5}:-0.172673453338;GZF1:-0.176687292261;NFE2L2:-0.177120297407;MTE{core}:-0.179003651619;HNF1A:-0.179808471341;ATF5_CREB3:-0.184927501327;bHLH_family:-0.188761627291;PRRX1,2:-0.206843474242;POU5F1:-0.208010915583;GTF2A1,2:-0.223838478085;KLF4:-0.226388299816;EP300:-0.230301749537;ZIC1..3:-0.237769099034;HAND1,2:-0.244542769442;JUN:-0.244827744229;HIF1A:-0.246092308673;PBX1:-0.246932836156;STAT2,4,6:-0.252171194547;MEF2{A,B,C,D}:-0.265318694163;ZNF384:-0.298494569375;LEF1_TCF7_TCF7L1,2:-0.314383147308;SOX{8,9,10}:-0.351892709176;NANOG:-0.367878546485;RREB1:-0.369979701361;FOX{D1,D2}:-0.373851403155;LHX3,4:-0.382903430605;MAFB:-0.383729395158;GFI1B:-0.393855488431;REST:-0.39401786272;BPTF:-0.423600551732;GTF2I:-0.427109803797;TOPORS:-0.428680769902;IRF1,2:-0.443262538971;ALX1:-0.468416357278;NFKB1_REL_RELA:-0.473158318964;GATA6:-0.473938384105;NR1H4:-0.475701180943;MYBL2:-0.495738895434;CUX2:-0.502510203409;HES1:-0.534144581788;AHR_ARNT_ARNT2:-0.547136611474;NHLH1,2:-0.547462525477;AIRE:-0.551360324902;SRF:-0.556000760924;ETS1,2:-0.559212159857;T:-0.577360559771;MZF1:-0.605214843662;FOXP3:-0.60979008914;SOX2:-0.650990050687;TFAP4:-0.651609283418;STAT5{A,B}:-0.65877234523;RUNX1..3:-0.668149139679;SPI1:-0.669106388591;SPIB:-0.674763894969;EN1,2:-0.682016400867;PRDM1:-0.68681246168;SOX17:-0.686886218717;PATZ1:-0.761188765564;HSF1,2:-0.765892158329;PAX5:-0.767463257028;NKX3-1:-0.78472708003;NR3C1:-0.786826699982;AR:-0.788016014508;FOXD3:-0.792870469474;SREBF1,2:-0.795998522077;EVI1:-0.802100140348;NFIX:-0.8490883036;STAT1,3:-0.862857762217;RXR{A,B,G}:-0.870985218546;POU3F1..4:-0.91420404218;NKX2-2,8:-0.914342814053;DMAP1_NCOR{1,2}_SMARC:-0.952960053342;MYFfamily:-0.960252326759;PAX8:-0.961935753526;ATF6:-0.974133126094;FOXA2:-1.01333378699;TGIF1:-1.1003322386;PAX6:-1.11680446664;GCM1,2:-1.2030405576;NFE2L1:-1.23286941196;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.25905776343;RXRA_VDR{dimer}:-1.31948990495;ZNF238:-1.3292264949;SPZ1:-1.39931277481;SMAD1..7,9:-1.41946829285;GATA4:-1.46331672739;HMX1:-1.46488181891;NANOG{mouse}:-1.62506683013;NFATC1..3:-1.63783159655;XBP1:-1.68544342492
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10688-109F4;search_select_hide=table117:FF:10688-109F4
}}
}}

Latest revision as of 14:33, 3 June 2020

Name:glassy cell carcinoma cell line:HOKUG
Species:Human (Homo sapiens)
Library ID:CNhs11824
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuecervix
dev stageNA
sexfemale
age53
cell typeunclassifiable
cell lineHOKUG
companyRIKEN Bioresource centre
collaborationYukio Nakamura (RIKEN BRC)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005113
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11824 CAGE DRX007896 DRR008768
Accession ID Hg19

Library idBAMCTSS
CNhs11824 DRZ000193 DRZ001578
Accession ID Hg38

Library idBAMCTSS
CNhs11824 DRZ011543 DRZ012928
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.64
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.263
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.00144
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.559
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.356
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0.0919
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.403
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0.7
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.0784
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.152
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.00581
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.232
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.059
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.244
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11824

Jaspar motifP-value
MA0002.20.00249
MA0003.10.944
MA0004.10.0753
MA0006.10.0629
MA0007.10.403
MA0009.10.337
MA0014.10.0831
MA0017.10.795
MA0018.20.547
MA0019.10.847
MA0024.11.63434e-5
MA0025.10.396
MA0027.10.832
MA0028.10.00498
MA0029.10.55
MA0030.10.149
MA0031.10.736
MA0035.20.74
MA0038.10.182
MA0039.20.0131
MA0040.10.0815
MA0041.10.724
MA0042.10.682
MA0043.10.412
MA0046.10.781
MA0047.20.881
MA0048.10.828
MA0050.10.253
MA0051.10.94
MA0052.10.0995
MA0055.10.00368
MA0057.10.166
MA0058.10.0214
MA0059.10.0158
MA0060.10.198
MA0061.15.78282e-6
MA0062.20.0331
MA0065.20.288
MA0066.10.36
MA0067.10.304
MA0068.10.0438
MA0069.10.787
MA0070.10.466
MA0071.10.655
MA0072.10.233
MA0073.10.405
MA0074.10.703
MA0076.10.00314
MA0077.10.538
MA0078.10.143
MA0079.20.317
MA0080.28.81462e-8
MA0081.10.0291
MA0083.10.85
MA0084.10.0254
MA0087.10.744
MA0088.10.198
MA0090.10.0302
MA0091.10.0228
MA0092.10.308
MA0093.10.102
MA0099.20.747
MA0100.10.838
MA0101.10.00283
MA0102.20.0478
MA0103.14.34335e-7
MA0104.20.0419
MA0105.12.84861e-8
MA0106.10.00544
MA0107.12.93981e-4
MA0108.20.443
MA0111.10.791
MA0112.20.704
MA0113.10.799
MA0114.10.155
MA0115.10.211
MA0116.12.17548e-4
MA0117.10.217
MA0119.10.596
MA0122.10.769
MA0124.10.598
MA0125.10.185
MA0131.10.991
MA0135.10.197
MA0136.18.49065e-5
MA0137.20.399
MA0138.20.323
MA0139.10.74
MA0140.10.0782
MA0141.10.816
MA0142.10.0762
MA0143.10.683
MA0144.10.665
MA0145.10.0903
MA0146.10.18
MA0147.10.043
MA0148.10.395
MA0149.10.0684
MA0150.10.956
MA0152.10.0929
MA0153.10.723
MA0154.17.76271e-4
MA0155.10.446
MA0156.10.123
MA0157.10.202
MA0159.10.439
MA0160.10.709
MA0162.10.781
MA0163.16.20478e-4
MA0164.10.33
MA0258.10.72
MA0259.10.285



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11824

Novel motifP-value
10.95
100.883
1000.748
1010.4
1020.128
1030.298
1040.394
1050.891
1060.219
1070.574
1080.789
1090.0695
110.0798
1100.964
1110.953
1120.267
1130.134
1140.136
1150.979
1160.866
1170.943
1180.469
1190.201
120.632
1200.994
1210.264
1220.183
1230.618
1240.038
1250.183
1260.906
1270.495
1280.0915
1290.496
130.0457
1300.88
1310.647
1320.603
1330.00308
1340.758
1350.0847
1360.00669
1370.146
1380.429
1390.295
140.876
1400.687
1410.348
1420.464
1430.00184
1440.356
1450.218
1460.718
1470.897
1480.118
1490.171
150.314
1500.733
1510.405
1520.302
1530.314
1540.737
1550.442
1560.488
1570.395
1580.259
1590.746
160.704
1600.501
1610.694
1620.695
1630.778
1640.599
1650.858
1660.378
1670.977
1680.11
1690.469
170.907
180.23
190.0803
20.992
200.201
210.703
220.945
230.103
240.975
250.656
260.564
270.408
280.622
290.816
30.256
300.32
310.156
320.017
330.844
340.418
350.0459
360.46
370.328
380.855
390.915
40.648
400.427
410.003
420.488
430.0805
440.496
450.956
460.236
470.379
480.662
490.0867
50.338
500.646
510.341
520.39
530.184
540.794
550.668
560.919
570.88
580.972
590.182
60.555
600.931
610.929
620.36
630.743
640.604
650.239
660.848
670.483
680.209
690.389
70.262
700.795
710.766
720.94
730.406
740.00173
750.661
760.429
770.508
780.089
790.0914
80.842
800.0822
810.0867
820.0205
830.16
840.995
850.0133
860.335
870.109
880.26
890.64
90.319
900.092
910.0779
920.216
930.571
940.0719
950.299
960.0489
970.59
980.197
990.861



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11824


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
305 (carcinoma)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100297 (carcinoma cell line sample)
0101120 (epithelial cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

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