FF:11835-124G8: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005040 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008560;DRR009432;DRZ000857;DRZ002242;DRZ012207;DRZ013592 | ||
|ancestors_in_disease_facet=DOID: | |ancestors_in_anatomy_facet=UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034 | |||
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:193,DOID:2394,DOID:120 | |||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000272,FF:0000274 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520metastasis%252c%2520donor2.CNhs13093.11835-124G8.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520metastasis%252c%2520donor2.CNhs13093.11835-124G8.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520metastasis%252c%2520donor2.CNhs13093.11835-124G8.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520metastasis%252c%2520donor2.CNhs13093.11835-124G8.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520metastasis%252c%2520donor2.CNhs13093.11835-124G8.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11835-124G8 | |id=FF:11835-124G8 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000274 | ||
|is_obsolete= | |||
|library_id=CNhs13093 | |||
|library_id_phase_based=2:CNhs13093 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11835 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11835 | |||
|name=mesenchymal precursor cell - ovarian cancer metastasis, donor2 | |name=mesenchymal precursor cell - ovarian cancer metastasis, donor2 | ||
|namespace= | |namespace= | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs13093,LSID1001,release013,COMPLETED | |profile_hcage=CNhs13093,LSID1001,release013,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.397035795364564,0,0.0372945114625121,0.165678944156147,0,0,0,0,0,0,0,0,0,0,0,0.409127188182498,0,-0.153323010348428,0,0.155186271533669,0,0,0,-0.0979578962680575,0,0,0.0493853113270484,0,0,0,0,0,0,0,0,0,0,0.182341901105911,0,-0.159146062720578,0,0.409127188182498,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,0.0171248918505085,0,0.312134826939893,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.032652837812811,0,0,0,-0.108505134288839,-0.00663380860461985,0,0.182341901105911,0,0.182341901105911,-0.0980353512377064,0.169522554790202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0.182341901105911,0,0,0,-0.0186483088905025,0,0,0.132359221918951,0,0,0 | |||
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| |||
|rna_box=124 | |rna_box=124 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=14.32655 | |rna_weight_ug=14.32655 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 91: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.75336355453635e-220!GO:0005737;cytoplasm;4.07879331401982e-185!GO:0043226;organelle;4.78274067911256e-146!GO:0043229;intracellular organelle;8.56189782923028e-146!GO:0043231;intracellular membrane-bound organelle;2.05723168162603e-141!GO:0043227;membrane-bound organelle;4.01604066258158e-141!GO:0044444;cytoplasmic part;9.21036089974648e-137!GO:0044422;organelle part;5.04804466354071e-113!GO:0044446;intracellular organelle part;1.14305108744078e-111!GO:0005515;protein binding;2.78997582584181e-83!GO:0032991;macromolecular complex;9.60555256350684e-77!GO:0030529;ribonucleoprotein complex;6.77598333003618e-66!GO:0044238;primary metabolic process;1.27460762018684e-64!GO:0044237;cellular metabolic process;6.72413318260402e-63!GO:0043170;macromolecule metabolic process;3.06717989961069e-59!GO:0043233;organelle lumen;1.54723438507613e-53!GO:0031974;membrane-enclosed lumen;1.54723438507613e-53!GO:0031090;organelle membrane;2.92500211498445e-53!GO:0005739;mitochondrion;4.48302143711855e-52!GO:0003723;RNA binding;6.5557744169134e-50!GO:0019538;protein metabolic process;1.03124427075751e-49!GO:0044428;nuclear part;4.10745792614897e-47!GO:0044260;cellular macromolecule metabolic process;9.16985336607906e-45!GO:0006412;translation;4.78505774628724e-44!GO:0044267;cellular protein metabolic process;7.38113535924919e-44!GO:0016043;cellular component organization and biogenesis;2.3304750912575e-42!GO:0015031;protein transport;3.78736254001904e-42!GO:0033036;macromolecule localization;5.15001801186725e-42!GO:0005840;ribosome;5.24694398837543e-42!GO:0045184;establishment of protein localization;1.78040180157856e-39!GO:0043234;protein complex;2.39203101572808e-39!GO:0008104;protein localization;2.47394428795711e-39!GO:0005634;nucleus;9.39632779675664e-39!GO:0009058;biosynthetic process;1.83399729544091e-38!GO:0003735;structural constituent of ribosome;5.1272456131857e-38!GO:0005829;cytosol;7.06812170623572e-38!GO:0009059;macromolecule biosynthetic process;2.41219111246522e-37!GO:0044429;mitochondrial part;1.11265691156163e-35!GO:0033279;ribosomal subunit;2.42723509098164e-34!GO:0044249;cellular biosynthetic process;7.40428556386778e-34!GO:0006396;RNA processing;1.17565185804342e-33!GO:0046907;intracellular transport;9.14710494128833e-33!GO:0031967;organelle envelope;1.29621573904781e-32!GO:0031975;envelope;2.2220014803723e-32!GO:0031981;nuclear lumen;7.37648000026258e-30!GO:0016071;mRNA metabolic process;1.22800854276017e-27!GO:0006886;intracellular protein transport;1.23155473164868e-27!GO:0043283;biopolymer metabolic process;8.22049143050444e-27!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.78138204632595e-26!GO:0005783;endoplasmic reticulum;1.92434586078081e-26!GO:0008380;RNA splicing;7.50896432351634e-26!GO:0010467;gene expression;5.32762920291153e-25!GO:0012505;endomembrane system;1.01823822251153e-24!GO:0005740;mitochondrial envelope;3.86989507552674e-24!GO:0006397;mRNA processing;6.33125414111836e-24!GO:0031966;mitochondrial membrane;5.06711809130221e-23!GO:0022613;ribonucleoprotein complex biogenesis and assembly;6.3419325897705e-23!GO:0006996;organelle organization and biogenesis;7.19419602847255e-23!GO:0065003;macromolecular complex assembly;1.08877051025419e-22!GO:0019866;organelle inner membrane;6.35589602430631e-22!GO:0044445;cytosolic part;1.16120530944765e-21!GO:0006119;oxidative phosphorylation;3.93337777528094e-21!GO:0005743;mitochondrial inner membrane;1.19600999574891e-20!GO:0022607;cellular component assembly;1.54626148317318e-20!GO:0043228;non-membrane-bound organelle;1.94511941511528e-20!GO:0043232;intracellular non-membrane-bound organelle;1.94511941511528e-20!GO:0048770;pigment granule;2.6451580444252e-20!GO:0042470;melanosome;2.6451580444252e-20!GO:0051649;establishment of cellular localization;3.00154527409481e-20!GO:0044432;endoplasmic reticulum part;3.63296970426165e-20!GO:0051641;cellular localization;3.77566243383738e-20!GO:0006457;protein folding;5.26742347183779e-20!GO:0005794;Golgi apparatus;9.26759442418876e-19!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.1568431410617e-18!GO:0005681;spliceosome;1.62498224096781e-18!GO:0044455;mitochondrial membrane part;3.00482300357177e-18!GO:0015934;large ribosomal subunit;3.71702950047229e-18!GO:0005654;nucleoplasm;6.52396852731784e-18!GO:0015935;small ribosomal subunit;3.97085305009126e-17!GO:0016462;pyrophosphatase activity;1.5324290040938e-16!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.57817146620976e-16!GO:0017111;nucleoside-triphosphatase activity;1.70219088018408e-16!GO:0016817;hydrolase activity, acting on acid anhydrides;2.19734777967983e-16!GO:0043285;biopolymer catabolic process;6.99968818823475e-16!GO:0000166;nucleotide binding;8.17910395708428e-16!GO:0005746;mitochondrial respiratory chain;1.2064312566156e-15!GO:0022618;protein-RNA complex assembly;2.34285670412085e-15!GO:0048193;Golgi vesicle transport;3.23134499960017e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.5721621917819e-15!GO:0000502;proteasome complex (sensu Eukaryota);4.14926303331385e-15!GO:0030163;protein catabolic process;5.5235814782691e-15!GO:0009057;macromolecule catabolic process;8.80692148604912e-15!GO:0008134;transcription factor binding;1.09203263103336e-14!GO:0044451;nucleoplasm part;1.62705956906829e-14!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.64745368115478e-14!GO:0050136;NADH dehydrogenase (quinone) activity;4.06607166657418e-14!GO:0003954;NADH dehydrogenase activity;4.06607166657418e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.06607166657418e-14!GO:0051186;cofactor metabolic process;4.49316303702674e-14!GO:0051082;unfolded protein binding;5.3016119203201e-14!GO:0044265;cellular macromolecule catabolic process;5.31858716101587e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;6.07135167209282e-14!GO:0005789;endoplasmic reticulum membrane;1.01089984806881e-13!GO:0016874;ligase activity;1.08766349689553e-13!GO:0044257;cellular protein catabolic process;1.09658848993113e-13!GO:0019941;modification-dependent protein catabolic process;1.13710027840951e-13!GO:0043632;modification-dependent macromolecule catabolic process;1.13710027840951e-13!GO:0031980;mitochondrial lumen;1.14451779614951e-13!GO:0005759;mitochondrial matrix;1.14451779614951e-13!GO:0006605;protein targeting;1.27848542655068e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.48805760258043e-13!GO:0008135;translation factor activity, nucleic acid binding;1.57950407097982e-13!GO:0006511;ubiquitin-dependent protein catabolic process;1.78067933443042e-13!GO:0016192;vesicle-mediated transport;3.16035977051199e-13!GO:0012501;programmed cell death;3.30574656662277e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.80436621276059e-13!GO:0006512;ubiquitin cycle;5.40365448009172e-13!GO:0005730;nucleolus;6.39376970019e-13!GO:0006915;apoptosis;8.77233762704346e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.29749291541445e-12!GO:0005793;ER-Golgi intermediate compartment;2.1921925677578e-12!GO:0030964;NADH dehydrogenase complex (quinone);3.03205178128926e-12!GO:0045271;respiratory chain complex I;3.03205178128926e-12!GO:0005747;mitochondrial respiratory chain complex I;3.03205178128926e-12!GO:0042775;organelle ATP synthesis coupled electron transport;6.71746719865794e-12!GO:0042773;ATP synthesis coupled electron transport;6.71746719865794e-12!GO:0043412;biopolymer modification;6.73516317969901e-12!GO:0032553;ribonucleotide binding;6.84291381939282e-12!GO:0032555;purine ribonucleotide binding;6.84291381939282e-12!GO:0008219;cell death;7.61380958647319e-12!GO:0016265;death;7.61380958647319e-12!GO:0048523;negative regulation of cellular process;9.18061132778816e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;9.18061132778816e-12!GO:0017076;purine nucleotide binding;1.52580384130331e-11!GO:0006732;coenzyme metabolic process;1.96402341616334e-11!GO:0044248;cellular catabolic process;2.08465210348785e-11!GO:0003743;translation initiation factor activity;4.66590630914231e-11!GO:0009055;electron carrier activity;4.73187828900891e-11!GO:0005761;mitochondrial ribosome;5.31237722772665e-11!GO:0000313;organellar ribosome;5.31237722772665e-11!GO:0006259;DNA metabolic process;6.45392448931137e-11!GO:0006464;protein modification process;8.38133281221037e-11!GO:0006413;translational initiation;1.36383166019856e-10!GO:0048519;negative regulation of biological process;2.10973862279898e-10!GO:0003712;transcription cofactor activity;2.63229289424852e-10!GO:0009259;ribonucleotide metabolic process;3.94324080886502e-10!GO:0006446;regulation of translational initiation;9.4401833503177e-10!GO:0006163;purine nucleotide metabolic process;1.02988101132358e-09!GO:0009150;purine ribonucleotide metabolic process;1.20607044997002e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.2683506164879e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;2.07059125197974e-09!GO:0000375;RNA splicing, via transesterification reactions;2.07059125197974e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.07059125197974e-09!GO:0005635;nuclear envelope;2.31662454414249e-09!GO:0007049;cell cycle;2.57059352566599e-09!GO:0006164;purine nucleotide biosynthetic process;2.85372749619673e-09!GO:0009152;purine ribonucleotide biosynthetic process;3.12066631258149e-09!GO:0009260;ribonucleotide biosynthetic process;3.33913355539363e-09!GO:0008565;protein transporter activity;4.21818051771897e-09!GO:0044431;Golgi apparatus part;4.30798988362215e-09!GO:0005768;endosome;5.29221841845628e-09!GO:0005788;endoplasmic reticulum lumen;5.42062392415151e-09!GO:0009199;ribonucleoside triphosphate metabolic process;5.54199155665755e-09!GO:0003924;GTPase activity;5.95334864691329e-09!GO:0031988;membrane-bound vesicle;6.2184751485814e-09!GO:0016023;cytoplasmic membrane-bound vesicle;6.2200588682384e-09!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;6.56099091855915e-09!GO:0031965;nuclear membrane;7.19310314411984e-09!GO:0009141;nucleoside triphosphate metabolic process;9.25589768128622e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;9.28978847787943e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.10988963168317e-08!GO:0043067;regulation of programmed cell death;1.19831026389936e-08!GO:0005524;ATP binding;1.25982240496263e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.30733758981521e-08!GO:0009144;purine nucleoside triphosphate metabolic process;1.30733758981521e-08!GO:0006913;nucleocytoplasmic transport;1.30733758981521e-08!GO:0042254;ribosome biogenesis and assembly;1.5139587658401e-08!GO:0042981;regulation of apoptosis;1.54887736472907e-08!GO:0006888;ER to Golgi vesicle-mediated transport;1.54887736472907e-08!GO:0015986;ATP synthesis coupled proton transport;1.60455468281272e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.60455468281272e-08!GO:0009142;nucleoside triphosphate biosynthetic process;1.98643969620465e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.98643969620465e-08!GO:0032559;adenyl ribonucleotide binding;2.21859004775459e-08!GO:0043069;negative regulation of programmed cell death;2.29514210226433e-08!GO:0051169;nuclear transport;2.29514210226433e-08!GO:0008639;small protein conjugating enzyme activity;2.33560135735051e-08!GO:0043687;post-translational protein modification;2.33560135735051e-08!GO:0003676;nucleic acid binding;2.65204175405486e-08!GO:0030120;vesicle coat;3.11110686092087e-08!GO:0030662;coated vesicle membrane;3.11110686092087e-08!GO:0051246;regulation of protein metabolic process;3.48433771829926e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.73378092880106e-08!GO:0004842;ubiquitin-protein ligase activity;3.99919494559036e-08!GO:0019829;cation-transporting ATPase activity;4.17510718721525e-08!GO:0016604;nuclear body;4.28744878830451e-08!GO:0019787;small conjugating protein ligase activity;4.66404021285847e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;4.80536714579728e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;4.80536714579728e-08!GO:0006916;anti-apoptosis;4.82424739897615e-08!GO:0030554;adenyl nucleotide binding;5.44482195093756e-08!GO:0043066;negative regulation of apoptosis;6.30007721813193e-08!GO:0046034;ATP metabolic process;8.48908918685459e-08!GO:0005773;vacuole;8.51803550800895e-08!GO:0003714;transcription corepressor activity;8.51803550800895e-08!GO:0016070;RNA metabolic process;8.69628826536375e-08!GO:0031982;vesicle;9.34990560247007e-08!GO:0031410;cytoplasmic vesicle;1.05489935534299e-07!GO:0031252;leading edge;1.10010609372416e-07!GO:0009056;catabolic process;1.29097719789332e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.3879133732996e-07!GO:0051726;regulation of cell cycle;1.43971835593805e-07!GO:0000074;regulation of progression through cell cycle;1.50663508894606e-07!GO:0015078;hydrogen ion transmembrane transporter activity;1.53036479134532e-07!GO:0044453;nuclear membrane part;1.60419499210426e-07!GO:0009060;aerobic respiration;1.99638302449118e-07!GO:0050794;regulation of cellular process;2.24378695462954e-07!GO:0006754;ATP biosynthetic process;2.66819784889726e-07!GO:0006753;nucleoside phosphate metabolic process;2.66819784889726e-07!GO:0048475;coated membrane;2.77625541249925e-07!GO:0030117;membrane coat;2.77625541249925e-07!GO:0051188;cofactor biosynthetic process;2.77625541249925e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.77625541249925e-07!GO:0017038;protein import;3.00230692042133e-07!GO:0016607;nuclear speck;3.15360492411611e-07!GO:0000139;Golgi membrane;3.16634329810763e-07!GO:0042623;ATPase activity, coupled;3.57684328173505e-07!GO:0006399;tRNA metabolic process;3.97052191255693e-07!GO:0016469;proton-transporting two-sector ATPase complex;3.99726871836231e-07!GO:0016881;acid-amino acid ligase activity;4.12831040618458e-07!GO:0016887;ATPase activity;4.18335170683399e-07!GO:0006461;protein complex assembly;4.77577137886528e-07!GO:0005839;proteasome core complex (sensu Eukaryota);7.99364299387724e-07!GO:0022402;cell cycle process;8.96212453169221e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;9.30489156832058e-07!GO:0004812;aminoacyl-tRNA ligase activity;9.30489156832058e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;9.30489156832058e-07!GO:0045333;cellular respiration;9.6280732019779e-07!GO:0007005;mitochondrion organization and biogenesis;1.02178678033021e-06!GO:0000323;lytic vacuole;1.14444980640824e-06!GO:0005764;lysosome;1.14444980640824e-06!GO:0043038;amino acid activation;1.16538092444907e-06!GO:0006418;tRNA aminoacylation for protein translation;1.16538092444907e-06!GO:0043039;tRNA aminoacylation;1.16538092444907e-06!GO:0005770;late endosome;1.3853250127346e-06!GO:0008361;regulation of cell size;2.05840616372623e-06!GO:0016564;transcription repressor activity;2.27252004450221e-06!GO:0016491;oxidoreductase activity;2.54055036876186e-06!GO:0006366;transcription from RNA polymerase II promoter;2.6836561008778e-06!GO:0009117;nucleotide metabolic process;3.19797891070583e-06!GO:0004386;helicase activity;3.42250250032041e-06!GO:0007243;protein kinase cascade;3.46485484272238e-06!GO:0016049;cell growth;3.51425733092209e-06!GO:0006752;group transfer coenzyme metabolic process;3.63074549913554e-06!GO:0008026;ATP-dependent helicase activity;3.96212764969219e-06!GO:0006099;tricarboxylic acid cycle;4.14618330437097e-06!GO:0046356;acetyl-CoA catabolic process;4.14618330437097e-06!GO:0051187;cofactor catabolic process;4.59885398059393e-06!GO:0005525;GTP binding;4.64885250113614e-06!GO:0009108;coenzyme biosynthetic process;5.14149916995348e-06!GO:0004298;threonine endopeptidase activity;5.57098165370178e-06!GO:0051789;response to protein stimulus;5.61097576592884e-06!GO:0006986;response to unfolded protein;5.61097576592884e-06!GO:0045786;negative regulation of progression through cell cycle;6.60766793899153e-06!GO:0044440;endosomal part;8.01245177384912e-06!GO:0010008;endosome membrane;8.01245177384912e-06!GO:0009109;coenzyme catabolic process;9.56291423046989e-06!GO:0005798;Golgi-associated vesicle;9.62647261865728e-06!GO:0030532;small nuclear ribonucleoprotein complex;9.9793164836082e-06!GO:0048522;positive regulation of cellular process;1.06360467898266e-05!GO:0016787;hydrolase activity;1.06360467898266e-05!GO:0065002;intracellular protein transport across a membrane;1.08511491500764e-05!GO:0001558;regulation of cell growth;1.10559261298167e-05!GO:0045259;proton-transporting ATP synthase complex;1.23939155887115e-05!GO:0032446;protein modification by small protein conjugation;1.46550596629652e-05!GO:0005643;nuclear pore;1.64251678714253e-05!GO:0006084;acetyl-CoA metabolic process;1.81511951986744e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.91479009545844e-05!GO:0006325;establishment and/or maintenance of chromatin architecture;2.01574204572891e-05!GO:0006613;cotranslational protein targeting to membrane;2.13396974111952e-05!GO:0030036;actin cytoskeleton organization and biogenesis;2.15842985929456e-05!GO:0006974;response to DNA damage stimulus;2.17496754843143e-05!GO:0008092;cytoskeletal protein binding;2.24176445511647e-05!GO:0050789;regulation of biological process;2.31268763935556e-05!GO:0016567;protein ubiquitination;2.49374628491562e-05!GO:0019899;enzyme binding;2.77228081725018e-05!GO:0045454;cell redox homeostasis;2.85902794511617e-05!GO:0006793;phosphorus metabolic process;2.94217123600951e-05!GO:0006796;phosphate metabolic process;2.94217123600951e-05!GO:0031324;negative regulation of cellular metabolic process;3.09606386111342e-05!GO:0030867;rough endoplasmic reticulum membrane;3.49888717744129e-05!GO:0032561;guanyl ribonucleotide binding;3.55086337794631e-05!GO:0019001;guanyl nucleotide binding;3.55086337794631e-05!GO:0005667;transcription factor complex;3.65457518495098e-05!GO:0051170;nuclear import;3.75009750853112e-05!GO:0030133;transport vesicle;3.7611367135359e-05!GO:0008654;phospholipid biosynthetic process;3.7695442962598e-05!GO:0016853;isomerase activity;4.04580382309447e-05!GO:0006364;rRNA processing;4.38547695703942e-05!GO:0006323;DNA packaging;4.59533739980609e-05!GO:0016310;phosphorylation;4.66567617448676e-05!GO:0006606;protein import into nucleus;5.34296272516197e-05!GO:0016072;rRNA metabolic process;8.15110546181463e-05!GO:0005905;coated pit;8.8014312570852e-05!GO:0033116;ER-Golgi intermediate compartment membrane;8.80626899975505e-05!GO:0015630;microtubule cytoskeleton;9.2442190609794e-05!GO:0046930;pore complex;0.000105093771537757!GO:0005769;early endosome;0.000105655882687632!GO:0031968;organelle outer membrane;0.000107908236805509!GO:0019867;outer membrane;0.000117192192343002!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000126504000159195!GO:0043566;structure-specific DNA binding;0.000130294261198812!GO:0000245;spliceosome assembly;0.000132450992186722!GO:0005048;signal sequence binding;0.000137504274900098!GO:0006403;RNA localization;0.000146829713500394!GO:0005762;mitochondrial large ribosomal subunit;0.000159113663942729!GO:0000315;organellar large ribosomal subunit;0.000159113663942729!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.000160910598872696!GO:0016563;transcription activator activity;0.000161551844698177!GO:0030029;actin filament-based process;0.000164002195967463!GO:0016859;cis-trans isomerase activity;0.000176842849040225!GO:0006091;generation of precursor metabolites and energy;0.000177326457715838!GO:0044262;cellular carbohydrate metabolic process;0.000177811647042333!GO:0007010;cytoskeleton organization and biogenesis;0.000180770084772435!GO:0015980;energy derivation by oxidation of organic compounds;0.000203984802489797!GO:0050657;nucleic acid transport;0.000206652850796669!GO:0051236;establishment of RNA localization;0.000206652850796669!GO:0050658;RNA transport;0.000206652850796669!GO:0009892;negative regulation of metabolic process;0.00020757949852524!GO:0016740;transferase activity;0.000211475150885332!GO:0006612;protein targeting to membrane;0.000211475150885332!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000216609234139925!GO:0003724;RNA helicase activity;0.000243910828567148!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000245436432012115!GO:0006281;DNA repair;0.000266231735013651!GO:0009967;positive regulation of signal transduction;0.000268639900338646!GO:0005791;rough endoplasmic reticulum;0.000269531834513871!GO:0008250;oligosaccharyl transferase complex;0.000281408875557325!GO:0000278;mitotic cell cycle;0.000288750567935686!GO:0051276;chromosome organization and biogenesis;0.000292721925675691!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.00030514955926469!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000326509846967261!GO:0005885;Arp2/3 protein complex;0.000338161031442208!GO:0001726;ruffle;0.000363485846074043!GO:0030659;cytoplasmic vesicle membrane;0.000363485846074043!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000366353492797529!GO:0015399;primary active transmembrane transporter activity;0.000366353492797529!GO:0000151;ubiquitin ligase complex;0.000369587831905409!GO:0004576;oligosaccharyl transferase activity;0.000375588226644036!GO:0008047;enzyme activator activity;0.000382812491027513!GO:0048468;cell development;0.000384892118700719!GO:0065004;protein-DNA complex assembly;0.000426691715206875!GO:0003713;transcription coactivator activity;0.000435769039855211!GO:0003697;single-stranded DNA binding;0.000473510206974229!GO:0043021;ribonucleoprotein binding;0.000474852326257313!GO:0016568;chromatin modification;0.000522227395844882!GO:0006891;intra-Golgi vesicle-mediated transport;0.000522227395844882!GO:0009719;response to endogenous stimulus;0.000565629530074943!GO:0005741;mitochondrial outer membrane;0.000573978115251226!GO:0030663;COPI coated vesicle membrane;0.000619128923012895!GO:0030126;COPI vesicle coat;0.000619128923012895!GO:0043623;cellular protein complex assembly;0.000681086390547633!GO:0018196;peptidyl-asparagine modification;0.000709090606939378!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000709090606939378!GO:0005813;centrosome;0.000714833683241222!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000714833683241222!GO:0048518;positive regulation of biological process;0.000832728090934558!GO:0016044;membrane organization and biogenesis;0.000934345413378191!GO:0016126;sterol biosynthetic process;0.000934345413378191!GO:0007264;small GTPase mediated signal transduction;0.000954042643959792!GO:0044433;cytoplasmic vesicle part;0.00101764263503813!GO:0051920;peroxiredoxin activity;0.00102008651423828!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00115678821136678!GO:0006333;chromatin assembly or disassembly;0.00123815266265703!GO:0009165;nucleotide biosynthetic process;0.0013821320116071!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00146572161268099!GO:0006414;translational elongation;0.0014763170276085!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00149290187832079!GO:0040008;regulation of growth;0.00150590777252661!GO:0065009;regulation of a molecular function;0.00153416804865297!GO:0016481;negative regulation of transcription;0.00162056633669599!GO:0030137;COPI-coated vesicle;0.00162056633669599!GO:0005815;microtubule organizing center;0.00162246681403798!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00162246681403798!GO:0030176;integral to endoplasmic reticulum membrane;0.00163821114613574!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00170014999763289!GO:0019843;rRNA binding;0.00177317816533238!GO:0000314;organellar small ribosomal subunit;0.00182350325204462!GO:0005763;mitochondrial small ribosomal subunit;0.00182350325204462!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00194108850259069!GO:0048471;perinuclear region of cytoplasm;0.00194863945281173!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00194863945281173!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00194863945281173!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00194863945281173!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00199069730971346!GO:0031543;peptidyl-proline dioxygenase activity;0.00199378429947205!GO:0046474;glycerophospholipid biosynthetic process;0.00205213760326725!GO:0008610;lipid biosynthetic process;0.00205449937447834!GO:0012506;vesicle membrane;0.002080808277642!GO:0008186;RNA-dependent ATPase activity;0.00210849233731927!GO:0030027;lamellipodium;0.00211110448985092!GO:0042802;identical protein binding;0.00211161391564793!GO:0031072;heat shock protein binding;0.00211161391564793!GO:0065007;biological regulation;0.00218824623298725!GO:0043284;biopolymer biosynthetic process;0.00222999363174985!GO:0008243;plasminogen activator activity;0.0022347709604534!GO:0030658;transport vesicle membrane;0.00239077997799721!GO:0016779;nucleotidyltransferase activity;0.0024288078777462!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00251107111801455!GO:0030127;COPII vesicle coat;0.00253938481833308!GO:0012507;ER to Golgi transport vesicle membrane;0.00253938481833308!GO:0046467;membrane lipid biosynthetic process;0.00253938481833308!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00258121326590312!GO:0030132;clathrin coat of coated pit;0.0028631708917883!GO:0007006;mitochondrial membrane organization and biogenesis;0.00293559021799848!GO:0031418;L-ascorbic acid binding;0.00299086709975418!GO:0019798;procollagen-proline dioxygenase activity;0.00306192921162204!GO:0007040;lysosome organization and biogenesis;0.00319279177504614!GO:0051028;mRNA transport;0.00319279177504614!GO:0030134;ER to Golgi transport vesicle;0.00326580833064904!GO:0006839;mitochondrial transport;0.0033183848129512!GO:0000785;chromatin;0.00337692485113555!GO:0007050;cell cycle arrest;0.00337692485113555!GO:0022890;inorganic cation transmembrane transporter activity;0.00342112100197228!GO:0016197;endosome transport;0.00345186224167724!GO:0045792;negative regulation of cell size;0.00350702141696471!GO:0003779;actin binding;0.00357614934230807!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00374593787354799!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00374593787354799!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00380981073696508!GO:0048500;signal recognition particle;0.00390827398812461!GO:0006260;DNA replication;0.00392223891272397!GO:0046489;phosphoinositide biosynthetic process;0.00393110831040391!GO:0006509;membrane protein ectodomain proteolysis;0.00429982770578923!GO:0033619;membrane protein proteolysis;0.00429982770578923!GO:0051168;nuclear export;0.00439092637104801!GO:0043681;protein import into mitochondrion;0.00444593016945495!GO:0030308;negative regulation of cell growth;0.00449657296853768!GO:0043492;ATPase activity, coupled to movement of substances;0.00473313080507068!GO:0015992;proton transport;0.00474920644820533!GO:0051427;hormone receptor binding;0.00474920644820533!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00474920644820533!GO:0004177;aminopeptidase activity;0.004751505529051!GO:0005774;vacuolar membrane;0.00492351530334897!GO:0005581;collagen;0.00493286241193525!GO:0048487;beta-tubulin binding;0.00503460363970749!GO:0030118;clathrin coat;0.00512957028444392!GO:0006650;glycerophospholipid metabolic process;0.00516756502796591!GO:0008632;apoptotic program;0.00519930896599885!GO:0006626;protein targeting to mitochondrion;0.00523344681829806!GO:0006818;hydrogen transport;0.00524755674790268!GO:0004004;ATP-dependent RNA helicase activity;0.00527746114444424!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00527753726942026!GO:0031902;late endosome membrane;0.00545640569037645!GO:0006979;response to oxidative stress;0.00550704628037129!GO:0001666;response to hypoxia;0.00587099738890175!GO:0003690;double-stranded DNA binding;0.00587591612464736!GO:0017166;vinculin binding;0.00612656610822966!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00647235277402219!GO:0008139;nuclear localization sequence binding;0.00658281631877524!GO:0030660;Golgi-associated vesicle membrane;0.00679366644423419!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00690886702525894!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00690901160867191!GO:0007033;vacuole organization and biogenesis;0.00717865021705037!GO:0006417;regulation of translation;0.00721416386399133!GO:0003899;DNA-directed RNA polymerase activity;0.00721416386399133!GO:0006695;cholesterol biosynthetic process;0.00741914273069798!GO:0046519;sphingoid metabolic process;0.00761575813800342!GO:0006334;nucleosome assembly;0.00804556257541296!GO:0035257;nuclear hormone receptor binding;0.008108252808557!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00812879945071176!GO:0045047;protein targeting to ER;0.00812879945071176!GO:0051087;chaperone binding;0.00832066572112151!GO:0051270;regulation of cell motility;0.00889547142027394!GO:0003729;mRNA binding;0.00954538589206232!GO:0005096;GTPase activator activity;0.00988006244614162!GO:0005869;dynactin complex;0.0103877008085795!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0110386015632942!GO:0000059;protein import into nucleus, docking;0.0111802229344902!GO:0045045;secretory pathway;0.0122145144267743!GO:0006672;ceramide metabolic process;0.0124109692493511!GO:0044437;vacuolar part;0.0126939408741699!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0131991817551039!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0131991817551039!GO:0008312;7S RNA binding;0.01323427746731!GO:0006383;transcription from RNA polymerase III promoter;0.0135220478556673!GO:0008234;cysteine-type peptidase activity;0.0142579024229948!GO:0006892;post-Golgi vesicle-mediated transport;0.0145326811849913!GO:0015631;tubulin binding;0.0155588879332405!GO:0030041;actin filament polymerization;0.015727397366572!GO:0005862;muscle thin filament tropomyosin;0.015727397366572!GO:0030384;phosphoinositide metabolic process;0.0159029015467232!GO:0005765;lysosomal membrane;0.0159779447780106!GO:0007030;Golgi organization and biogenesis;0.0160043807492655!GO:0007242;intracellular signaling cascade;0.0162735444273162!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0162735444273162!GO:0016363;nuclear matrix;0.0162735444273162!GO:0006740;NADPH regeneration;0.0164083541893559!GO:0006098;pentose-phosphate shunt;0.0164083541893559!GO:0043433;negative regulation of transcription factor activity;0.0164458215082765!GO:0050811;GABA receptor binding;0.0166059654047436!GO:0003746;translation elongation factor activity;0.0167202034341974!GO:0006497;protein amino acid lipidation;0.0168784958006611!GO:0009966;regulation of signal transduction;0.0169033039185841!GO:0006007;glucose catabolic process;0.0169645331946111!GO:0005694;chromosome;0.0169645331946111!GO:0051287;NAD binding;0.0172634540208776!GO:0043022;ribosome binding;0.0176918881698774!GO:0031497;chromatin assembly;0.0177073655502892!GO:0006595;polyamine metabolic process;0.0179208500642214!GO:0048144;fibroblast proliferation;0.018723044777961!GO:0048145;regulation of fibroblast proliferation;0.018723044777961!GO:0051128;regulation of cellular component organization and biogenesis;0.0187936921186669!GO:0030503;regulation of cell redox homeostasis;0.0191348318400681!GO:0008180;signalosome;0.0192010005621092!GO:0004197;cysteine-type endopeptidase activity;0.0199318881675751!GO:0045926;negative regulation of growth;0.0199318881675751!GO:0008320;protein transmembrane transporter activity;0.0199318881675751!GO:0044420;extracellular matrix part;0.0202219367082231!GO:0031529;ruffle organization and biogenesis;0.0202219367082231!GO:0007034;vacuolar transport;0.0204336591641186!GO:0030433;ER-associated protein catabolic process;0.0204336591641186!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0204336591641186!GO:0035258;steroid hormone receptor binding;0.0207201528881672!GO:0006402;mRNA catabolic process;0.0207487629392929!GO:0000087;M phase of mitotic cell cycle;0.0212440852958509!GO:0005100;Rho GTPase activator activity;0.0214230238832722!GO:0045892;negative regulation of transcription, DNA-dependent;0.0214354618071166!GO:0030125;clathrin vesicle coat;0.0220503410101759!GO:0030665;clathrin coated vesicle membrane;0.0220503410101759!GO:0006607;NLS-bearing substrate import into nucleus;0.0223227826286035!GO:0045936;negative regulation of phosphate metabolic process;0.0223227826286035!GO:0000049;tRNA binding;0.0223296324206317!GO:0044427;chromosomal part;0.0224616989706917!GO:0051272;positive regulation of cell motility;0.0224702730888889!GO:0040017;positive regulation of locomotion;0.0224702730888889!GO:0007569;cell aging;0.0224757055305018!GO:0003756;protein disulfide isomerase activity;0.022793245686911!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.022793245686911!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0228933089494832!GO:0015002;heme-copper terminal oxidase activity;0.0228933089494832!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0228933089494832!GO:0004129;cytochrome-c oxidase activity;0.0228933089494832!GO:0006984;ER-nuclear signaling pathway;0.0229121731471322!GO:0000339;RNA cap binding;0.0231729827983276!GO:0007067;mitosis;0.0238442284763615!GO:0040011;locomotion;0.0242217682178168!GO:0051101;regulation of DNA binding;0.0246022671956659!GO:0051252;regulation of RNA metabolic process;0.0249068456633936!GO:0030032;lamellipodium biogenesis;0.0251620951893009!GO:0043065;positive regulation of apoptosis;0.025195283666305!GO:0033559;unsaturated fatty acid metabolic process;0.0261992758800203!GO:0006636;unsaturated fatty acid biosynthetic process;0.0261992758800203!GO:0006950;response to stress;0.0262480474051823!GO:0035035;histone acetyltransferase binding;0.0266680115669596!GO:0006518;peptide metabolic process;0.0268401976405786!GO:0000096;sulfur amino acid metabolic process;0.0268640298214901!GO:0050790;regulation of catalytic activity;0.0269373696211423!GO:0040012;regulation of locomotion;0.0274927635719825!GO:0031301;integral to organelle membrane;0.0276667636641088!GO:0005832;chaperonin-containing T-complex;0.0277543014267585!GO:0031901;early endosome membrane;0.0280505406243282!GO:0000902;cell morphogenesis;0.0282192133850125!GO:0032989;cellular structure morphogenesis;0.0282192133850125!GO:0031326;regulation of cellular biosynthetic process;0.0282192133850125!GO:0008154;actin polymerization and/or depolymerization;0.0284333483042574!GO:0009889;regulation of biosynthetic process;0.0284935644672019!GO:0005684;U2-dependent spliceosome;0.0288979129464198!GO:0045941;positive regulation of transcription;0.0290579922740359!GO:0000209;protein polyubiquitination;0.0292267382855186!GO:0046426;negative regulation of JAK-STAT cascade;0.0292352320851665!GO:0032940;secretion by cell;0.0295025415742612!GO:0003711;transcription elongation regulator activity;0.0297183296712404!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0297192493308164!GO:0043068;positive regulation of programmed cell death;0.0297225574798545!GO:0016272;prefoldin complex;0.0297225574798545!GO:0031625;ubiquitin protein ligase binding;0.0297225574798545!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0297819706562845!GO:0048146;positive regulation of fibroblast proliferation;0.0299485534845884!GO:0032507;maintenance of cellular protein localization;0.0307391734078102!GO:0007160;cell-matrix adhesion;0.0313251194937285!GO:0005520;insulin-like growth factor binding;0.0322458845050977!GO:0005874;microtubule;0.0326413734059422!GO:0051336;regulation of hydrolase activity;0.0327854022833775!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0327931518534005!GO:0045893;positive regulation of transcription, DNA-dependent;0.0327931518534005!GO:0001952;regulation of cell-matrix adhesion;0.0330720208557018!GO:0022408;negative regulation of cell-cell adhesion;0.0330720208557018!GO:0031589;cell-substrate adhesion;0.0340829592217466!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0343800940162706!GO:0010257;NADH dehydrogenase complex assembly;0.0343800940162706!GO:0033108;mitochondrial respiratory chain complex assembly;0.0343800940162706!GO:0042158;lipoprotein biosynthetic process;0.0345865311961447!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0347497294703156!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0347497294703156!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0347932004603023!GO:0030119;AP-type membrane coat adaptor complex;0.0351208542504167!GO:0007021;tubulin folding;0.0351767830060986!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0352754745120947!GO:0051301;cell division;0.0352778528101317!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0356072033310832!GO:0043488;regulation of mRNA stability;0.0360211075731334!GO:0043487;regulation of RNA stability;0.0360211075731334!GO:0030833;regulation of actin filament polymerization;0.0361208560927292!GO:0051540;metal cluster binding;0.0361307328070752!GO:0051536;iron-sulfur cluster binding;0.0361307328070752!GO:0030984;kininogen binding;0.0361738583043336!GO:0004213;cathepsin B activity;0.0361738583043336!GO:0016860;intramolecular oxidoreductase activity;0.0376375492627343!GO:0006643;membrane lipid metabolic process;0.0376556011981742!GO:0006354;RNA elongation;0.0378570003901186!GO:0008637;apoptotic mitochondrial changes;0.0381005813404002!GO:0007265;Ras protein signal transduction;0.0381091871720772!GO:0019318;hexose metabolic process;0.0387546553628905!GO:0022884;macromolecule transmembrane transporter activity;0.0387546553628905!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0387546553628905!GO:0005099;Ras GTPase activator activity;0.0387546553628905!GO:0046483;heterocycle metabolic process;0.0388629227153138!GO:0022403;cell cycle phase;0.0389610633621575!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0390257511658973!GO:0051329;interphase of mitotic cell cycle;0.0395492473572196!GO:0008033;tRNA processing;0.0398839182122771!GO:0030521;androgen receptor signaling pathway;0.0401771134039946!GO:0030880;RNA polymerase complex;0.0402370385042093!GO:0005637;nuclear inner membrane;0.0404877953434807!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.040784038039179!GO:0033673;negative regulation of kinase activity;0.0414977410109987!GO:0006469;negative regulation of protein kinase activity;0.0414977410109987!GO:0051235;maintenance of localization;0.0423706077450498!GO:0006611;protein export from nucleus;0.0426275807954361!GO:0022406;membrane docking;0.0430121553967981!GO:0048278;vesicle docking;0.0430121553967981!GO:0045185;maintenance of protein localization;0.0431224179713676!GO:0008538;proteasome activator activity;0.0431432890171606!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0432018190692296!GO:0006506;GPI anchor biosynthetic process;0.0436092473524589!GO:0031124;mRNA 3'-end processing;0.0436092473524589!GO:0006458;'de novo' protein folding;0.0436092473524589!GO:0051084;'de novo' posttranslational protein folding;0.0436092473524589!GO:0005586;collagen type III;0.0436208877113158!GO:0006778;porphyrin metabolic process;0.0438794246518596!GO:0033013;tetrapyrrole metabolic process;0.0438794246518596!GO:0004674;protein serine/threonine kinase activity;0.0440829563163424!GO:0019752;carboxylic acid metabolic process;0.044390089320354!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.045922715199476!GO:0044452;nucleolar part;0.045922715199476!GO:0043281;regulation of caspase activity;0.0466711912022705!GO:0050681;androgen receptor binding;0.0468619423488725!GO:0006790;sulfur metabolic process;0.0468669068906023!GO:0008147;structural constituent of bone;0.0474712821711894!GO:0042326;negative regulation of phosphorylation;0.0476199046287803!GO:0005996;monosaccharide metabolic process;0.04845084045965!GO:0051098;regulation of binding;0.0487324859069773!GO:0006082;organic acid metabolic process;0.0488810151316544!GO:0051348;negative regulation of transferase activity;0.0491061673400486!GO:0006897;endocytosis;0.0495311865838259!GO:0010324;membrane invagination;0.0495311865838259!GO:0018193;peptidyl-amino acid modification;0.0497402760113176 | |||
|sample_id=11835 | |sample_id=11835 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue=ovary | |sample_tissue=ovary | ||
|top_motifs=PAX4:2.00908478193;SRF:1.65722958107;HIF1A:1.58016283354;ALX4:1.52521756689;UFEwm:1.4665211793;ZNF384:1.42800486425;GZF1:1.40317069146;TAL1_TCF{3,4,12}:1.38596707902;NR3C1:1.31342217067;ESR1:1.29066279842;TEF:1.25764251913;ZNF238:1.25347163696;RXRA_VDR{dimer}:1.18027069119;NKX3-1:1.11169282036;ATF6:1.11032971605;NFE2L1:1.08829963378;HOX{A4,D4}:1.05413997129;GLI1..3:1.05322501337;HSF1,2:1.01336799274;TEAD1:0.988271381377;MYBL2:0.972253603573;XBP1:0.961268611846;TLX1..3_NFIC{dimer}:0.936936434776;SPZ1:0.935812078714;EVI1:0.930100282034;RXR{A,B,G}:0.917214262049;TBP:0.894415288785;ZIC1..3:0.881775059096;HES1:0.848661339077;ZBTB16:0.842754976441;EN1,2:0.778773255837;EBF1:0.775718017838;XCPE1{core}:0.766872960883;HOX{A5,B5}:0.739263713421;GTF2A1,2:0.733510807627;TOPORS:0.729753898076;ZBTB6:0.729125076333;NR6A1:0.713901312936;AIRE:0.681077066364;FOXL1:0.68100992438;PRDM1:0.680583870195;TP53:0.656446231648;HMX1:0.650466012878;TFCP2:0.635739359949;PPARG:0.609494976459;HMGA1,2:0.604610033878;MAFB:0.598559978177;MTE{core}:0.596879620582;NFATC1..3:0.589784265829;GATA4:0.581348619477;PAX1,9:0.572530004288;KLF4:0.551074871602;GCM1,2:0.546767722744;PAX8:0.521355409863;SOX17:0.509186439892;HLF:0.46970558819;ONECUT1,2:0.455413539323;TFAP2{A,C}:0.439167412747;MZF1:0.434419585964;bHLH_family:0.361753326103;HBP1_HMGB_SSRP1_UBTF:0.359971436003;GTF2I:0.322776353411;SMAD1..7,9:0.307835717564;TFAP2B:0.297969066696;TFAP4:0.290064208367;POU6F1:0.278307222056;NFE2L2:0.274910130823;ZFP161:0.264118534543;NHLH1,2:0.255574469301;HAND1,2:0.223251329014;GFI1B:0.214938501832;PATZ1:0.212520772115;IKZF1:0.191315528575;LHX3,4:0.187284766724;HOXA9_MEIS1:0.179378929272;FOS_FOS{B,L1}_JUN{B,D}:0.173156544603;IRF1,2:0.161934638374;MAZ:0.145986789698;ALX1:0.14580420188;BACH2:0.142766596069;NFE2:0.140313592995;NKX2-2,8:0.136396552471;POU1F1:0.123069356787;NKX3-2:0.106826653862;TFDP1:0.0948918699145;FOXD3:0.0899065462658;CDC5L:0.0785438216434;SREBF1,2:0.0748663327634;SP1:0.0544523222394;MYFfamily:0.0537327601433;POU3F1..4:0.0509681067711;ZNF423:0.0473988650666;NKX2-1,4:0.0452027654702;NKX6-1,2:0.0443939083344;AR:0.0408536310782;FOXP1:0.037926897055;FOSL2:0.0207661957311;RREB1:0.0138593872907;EP300:0.00550394331337;NANOG{mouse}:0.00372066432241;ATF2:-0.00692146324814;TBX4,5:-0.0156768050761;RFX1:-0.0231951327174;REST:-0.038128464438;MED-1{core}:-0.0418615939026;HNF1A:-0.0619339309856;HOX{A6,A7,B6,B7}:-0.0793363405929;HIC1:-0.0830229335992;PAX2:-0.107680058021;NFKB1_REL_RELA:-0.108278946283;PITX1..3:-0.11336588736;TLX2:-0.126362056915;SOX2:-0.160785221345;SOX5:-0.161190522936;RUNX1..3:-0.169020647918;STAT2,4,6:-0.169059643655;ZNF148:-0.178457686318;AHR_ARNT_ARNT2:-0.197526448964;LEF1_TCF7_TCF7L1,2:-0.199055254974;FOX{D1,D2}:-0.20415486005;JUN:-0.208354021735;NFIX:-0.209246400922;CREB1:-0.222655948578;HNF4A_NR2F1,2:-0.228885228563;MEF2{A,B,C,D}:-0.254535346047;PAX3,7:-0.262345253515;FOX{I1,J2}:-0.274082965481;DBP:-0.302369300403;CRX:-0.309500014288;DMAP1_NCOR{1,2}_SMARC:-0.315610800839;EGR1..3:-0.338810698355;ETS1,2:-0.340535126839;MTF1:-0.341045172694;BPTF:-0.352839027046;CDX1,2,4:-0.357046842064;CEBPA,B_DDIT3:-0.38331707299;MYOD1:-0.389863761048;OCT4_SOX2{dimer}:-0.414095527931;POU2F1..3:-0.444573323756;NR1H4:-0.476559280849;NKX2-3_NKX2-5:-0.489546488685;CUX2:-0.491439506048;ZEB1:-0.491847261635;FOXA2:-0.502744907016;ADNP_IRX_SIX_ZHX:-0.516531888562;NR5A1,2:-0.518438651771;MYB:-0.523813848045;LMO2:-0.525676674861;STAT5{A,B}:-0.530823387376;ATF4:-0.557820669246;POU5F1:-0.586080842955;ARID5B:-0.590866119809;NFIL3:-0.600707083441;SPIB:-0.603849827864;ZNF143:-0.634580521847;IRF7:-0.636362582812;SPI1:-0.640776193043;FOXO1,3,4:-0.664759304271;NRF1:-0.679951195485;ATF5_CREB3:-0.683619321137;PRRX1,2:-0.689566043867;T:-0.707683255604;SNAI1..3:-0.708417072354;ELK1,4_GABP{A,B1}:-0.712557752679;YY1:-0.724427109506;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.734567814782;TGIF1:-0.744645046316;ELF1,2,4:-0.74777811087;PAX5:-0.789047669896;GATA6:-0.792715030555;RFX2..5_RFXANK_RFXAP:-0.815610503818;FOXM1:-0.824777450788;SOX{8,9,10}:-0.864680034163;GFI1:-0.867217712173;E2F1..5:-0.885143372069;IKZF2:-0.91289128356;PAX6:-0.930247004777;FOXQ1:-0.970597380085;PDX1:-1.02464606483;FOXN1:-1.02586457271;STAT1,3:-1.02693953928;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.11291892841;RBPJ:-1.12134092211;VSX1,2:-1.1333322853;RORA:-1.13732071006;NFY{A,B,C}:-1.17766028512;ESRRA:-1.18120514259;FOXP3:-1.27285552892;BREu{core}:-1.28694506941;PBX1:-1.38940193435;NANOG:-1.47107864883;FOX{F1,F2,J1}:-1.74117366573 | |top_motifs=PAX4:2.00908478193;SRF:1.65722958107;HIF1A:1.58016283354;ALX4:1.52521756689;UFEwm:1.4665211793;ZNF384:1.42800486425;GZF1:1.40317069146;TAL1_TCF{3,4,12}:1.38596707902;NR3C1:1.31342217067;ESR1:1.29066279842;TEF:1.25764251913;ZNF238:1.25347163696;RXRA_VDR{dimer}:1.18027069119;NKX3-1:1.11169282036;ATF6:1.11032971605;NFE2L1:1.08829963378;HOX{A4,D4}:1.05413997129;GLI1..3:1.05322501337;HSF1,2:1.01336799274;TEAD1:0.988271381377;MYBL2:0.972253603573;XBP1:0.961268611846;TLX1..3_NFIC{dimer}:0.936936434776;SPZ1:0.935812078714;EVI1:0.930100282034;RXR{A,B,G}:0.917214262049;TBP:0.894415288785;ZIC1..3:0.881775059096;HES1:0.848661339077;ZBTB16:0.842754976441;EN1,2:0.778773255837;EBF1:0.775718017838;XCPE1{core}:0.766872960883;HOX{A5,B5}:0.739263713421;GTF2A1,2:0.733510807627;TOPORS:0.729753898076;ZBTB6:0.729125076333;NR6A1:0.713901312936;AIRE:0.681077066364;FOXL1:0.68100992438;PRDM1:0.680583870195;TP53:0.656446231648;HMX1:0.650466012878;TFCP2:0.635739359949;PPARG:0.609494976459;HMGA1,2:0.604610033878;MAFB:0.598559978177;MTE{core}:0.596879620582;NFATC1..3:0.589784265829;GATA4:0.581348619477;PAX1,9:0.572530004288;KLF4:0.551074871602;GCM1,2:0.546767722744;PAX8:0.521355409863;SOX17:0.509186439892;HLF:0.46970558819;ONECUT1,2:0.455413539323;TFAP2{A,C}:0.439167412747;MZF1:0.434419585964;bHLH_family:0.361753326103;HBP1_HMGB_SSRP1_UBTF:0.359971436003;GTF2I:0.322776353411;SMAD1..7,9:0.307835717564;TFAP2B:0.297969066696;TFAP4:0.290064208367;POU6F1:0.278307222056;NFE2L2:0.274910130823;ZFP161:0.264118534543;NHLH1,2:0.255574469301;HAND1,2:0.223251329014;GFI1B:0.214938501832;PATZ1:0.212520772115;IKZF1:0.191315528575;LHX3,4:0.187284766724;HOXA9_MEIS1:0.179378929272;FOS_FOS{B,L1}_JUN{B,D}:0.173156544603;IRF1,2:0.161934638374;MAZ:0.145986789698;ALX1:0.14580420188;BACH2:0.142766596069;NFE2:0.140313592995;NKX2-2,8:0.136396552471;POU1F1:0.123069356787;NKX3-2:0.106826653862;TFDP1:0.0948918699145;FOXD3:0.0899065462658;CDC5L:0.0785438216434;SREBF1,2:0.0748663327634;SP1:0.0544523222394;MYFfamily:0.0537327601433;POU3F1..4:0.0509681067711;ZNF423:0.0473988650666;NKX2-1,4:0.0452027654702;NKX6-1,2:0.0443939083344;AR:0.0408536310782;FOXP1:0.037926897055;FOSL2:0.0207661957311;RREB1:0.0138593872907;EP300:0.00550394331337;NANOG{mouse}:0.00372066432241;ATF2:-0.00692146324814;TBX4,5:-0.0156768050761;RFX1:-0.0231951327174;REST:-0.038128464438;MED-1{core}:-0.0418615939026;HNF1A:-0.0619339309856;HOX{A6,A7,B6,B7}:-0.0793363405929;HIC1:-0.0830229335992;PAX2:-0.107680058021;NFKB1_REL_RELA:-0.108278946283;PITX1..3:-0.11336588736;TLX2:-0.126362056915;SOX2:-0.160785221345;SOX5:-0.161190522936;RUNX1..3:-0.169020647918;STAT2,4,6:-0.169059643655;ZNF148:-0.178457686318;AHR_ARNT_ARNT2:-0.197526448964;LEF1_TCF7_TCF7L1,2:-0.199055254974;FOX{D1,D2}:-0.20415486005;JUN:-0.208354021735;NFIX:-0.209246400922;CREB1:-0.222655948578;HNF4A_NR2F1,2:-0.228885228563;MEF2{A,B,C,D}:-0.254535346047;PAX3,7:-0.262345253515;FOX{I1,J2}:-0.274082965481;DBP:-0.302369300403;CRX:-0.309500014288;DMAP1_NCOR{1,2}_SMARC:-0.315610800839;EGR1..3:-0.338810698355;ETS1,2:-0.340535126839;MTF1:-0.341045172694;BPTF:-0.352839027046;CDX1,2,4:-0.357046842064;CEBPA,B_DDIT3:-0.38331707299;MYOD1:-0.389863761048;OCT4_SOX2{dimer}:-0.414095527931;POU2F1..3:-0.444573323756;NR1H4:-0.476559280849;NKX2-3_NKX2-5:-0.489546488685;CUX2:-0.491439506048;ZEB1:-0.491847261635;FOXA2:-0.502744907016;ADNP_IRX_SIX_ZHX:-0.516531888562;NR5A1,2:-0.518438651771;MYB:-0.523813848045;LMO2:-0.525676674861;STAT5{A,B}:-0.530823387376;ATF4:-0.557820669246;POU5F1:-0.586080842955;ARID5B:-0.590866119809;NFIL3:-0.600707083441;SPIB:-0.603849827864;ZNF143:-0.634580521847;IRF7:-0.636362582812;SPI1:-0.640776193043;FOXO1,3,4:-0.664759304271;NRF1:-0.679951195485;ATF5_CREB3:-0.683619321137;PRRX1,2:-0.689566043867;T:-0.707683255604;SNAI1..3:-0.708417072354;ELK1,4_GABP{A,B1}:-0.712557752679;YY1:-0.724427109506;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.734567814782;TGIF1:-0.744645046316;ELF1,2,4:-0.74777811087;PAX5:-0.789047669896;GATA6:-0.792715030555;RFX2..5_RFXANK_RFXAP:-0.815610503818;FOXM1:-0.824777450788;SOX{8,9,10}:-0.864680034163;GFI1:-0.867217712173;E2F1..5:-0.885143372069;IKZF2:-0.91289128356;PAX6:-0.930247004777;FOXQ1:-0.970597380085;PDX1:-1.02464606483;FOXN1:-1.02586457271;STAT1,3:-1.02693953928;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.11291892841;RBPJ:-1.12134092211;VSX1,2:-1.1333322853;RORA:-1.13732071006;NFY{A,B,C}:-1.17766028512;ESRRA:-1.18120514259;FOXP3:-1.27285552892;BREu{core}:-1.28694506941;PBX1:-1.38940193435;NANOG:-1.47107864883;FOX{F1,F2,J1}:-1.74117366573 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11835-124G8;search_select_hide=table117:FF:11835-124G8 | |||
}} | }} | ||
Latest revision as of 18:22, 4 June 2020
| Name: | mesenchymal precursor cell - ovarian cancer metastasis, donor2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs13093 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13093
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13093
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.812 |
| 10 | 10 | 0.954 |
| 100 | 100 | 0.846 |
| 101 | 101 | 0.832 |
| 102 | 102 | 0.536 |
| 103 | 103 | 0.592 |
| 104 | 104 | 0.823 |
| 105 | 105 | 0.106 |
| 106 | 106 | 9.29043e-4 |
| 107 | 107 | 0.016 |
| 108 | 108 | 0.0504 |
| 109 | 109 | 0.779 |
| 11 | 11 | 0.68 |
| 110 | 110 | 0.458 |
| 111 | 111 | 0.849 |
| 112 | 112 | 0.132 |
| 113 | 113 | 0.809 |
| 114 | 114 | 0.235 |
| 115 | 115 | 0.203 |
| 116 | 116 | 0.0898 |
| 117 | 117 | 0.816 |
| 118 | 118 | 0.852 |
| 119 | 119 | 0.627 |
| 12 | 12 | 0.594 |
| 120 | 120 | 0.176 |
| 121 | 121 | 0.757 |
| 122 | 122 | 0.00433 |
| 123 | 123 | 0.423 |
| 124 | 124 | 0.34 |
| 125 | 125 | 0.274 |
| 126 | 126 | 0.848 |
| 127 | 127 | 0.574 |
| 128 | 128 | 0.231 |
| 129 | 129 | 0.291 |
| 13 | 13 | 0.51 |
| 130 | 130 | 0.0606 |
| 131 | 131 | 0.614 |
| 132 | 132 | 0.376 |
| 133 | 133 | 0.764 |
| 134 | 134 | 0.542 |
| 135 | 135 | 0.564 |
| 136 | 136 | 0.645 |
| 137 | 137 | 0.113 |
| 138 | 138 | 0.475 |
| 139 | 139 | 0.679 |
| 14 | 14 | 0.134 |
| 140 | 140 | 0.283 |
| 141 | 141 | 0.672 |
| 142 | 142 | 0.397 |
| 143 | 143 | 0.313 |
| 144 | 144 | 0.501 |
| 145 | 145 | 0.237 |
| 146 | 146 | 0.445 |
| 147 | 147 | 0.111 |
| 148 | 148 | 0.683 |
| 149 | 149 | 0.121 |
| 15 | 15 | 0.952 |
| 150 | 150 | 0.227 |
| 151 | 151 | 0.629 |
| 152 | 152 | 0.0253 |
| 153 | 153 | 0.233 |
| 154 | 154 | 0.797 |
| 155 | 155 | 0.136 |
| 156 | 156 | 0.791 |
| 157 | 157 | 0.87 |
| 158 | 158 | 0.255 |
| 159 | 159 | 0.874 |
| 16 | 16 | 0.122 |
| 160 | 160 | 0.421 |
| 161 | 161 | 0.667 |
| 162 | 162 | 0.113 |
| 163 | 163 | 0.155 |
| 164 | 164 | 0.0719 |
| 165 | 165 | 0.618 |
| 166 | 166 | 0.0526 |
| 167 | 167 | 0.653 |
| 168 | 168 | 0.863 |
| 169 | 169 | 0.0411 |
| 17 | 17 | 0.211 |
| 18 | 18 | 0.101 |
| 19 | 19 | 0.0441 |
| 2 | 2 | 0.36 |
| 20 | 20 | 0.363 |
| 21 | 21 | 0.128 |
| 22 | 22 | 0.553 |
| 23 | 23 | 0.0453 |
| 24 | 24 | 0.395 |
| 25 | 25 | 0.0271 |
| 26 | 26 | 0.48 |
| 27 | 27 | 0.476 |
| 28 | 28 | 0.163 |
| 29 | 29 | 0.43 |
| 3 | 3 | 0.6 |
| 30 | 30 | 0.66 |
| 31 | 31 | 0.813 |
| 32 | 32 | 8.55417e-11 |
| 33 | 33 | 0.83 |
| 34 | 34 | 0.763 |
| 35 | 35 | 0.604 |
| 36 | 36 | 0.0979 |
| 37 | 37 | 0.0493 |
| 38 | 38 | 0.441 |
| 39 | 39 | 0.186 |
| 4 | 4 | 0.76 |
| 40 | 40 | 0.675 |
| 41 | 41 | 0.632 |
| 42 | 42 | 0.243 |
| 43 | 43 | 0.817 |
| 44 | 44 | 0.491 |
| 45 | 45 | 0.973 |
| 46 | 46 | 0.226 |
| 47 | 47 | 0.879 |
| 48 | 48 | 0.71 |
| 49 | 49 | 0.98 |
| 5 | 5 | 0.74 |
| 50 | 50 | 0.435 |
| 51 | 51 | 0.892 |
| 52 | 52 | 0.601 |
| 53 | 53 | 0.302 |
| 54 | 54 | 0.671 |
| 55 | 55 | 0.128 |
| 56 | 56 | 0.867 |
| 57 | 57 | 0.43 |
| 58 | 58 | 0.387 |
| 59 | 59 | 0.298 |
| 6 | 6 | 0.551 |
| 60 | 60 | 0.595 |
| 61 | 61 | 0.619 |
| 62 | 62 | 0.939 |
| 63 | 63 | 0.291 |
| 64 | 64 | 0.615 |
| 65 | 65 | 0.631 |
| 66 | 66 | 0.0281 |
| 67 | 67 | 0.508 |
| 68 | 68 | 0.972 |
| 69 | 69 | 0.986 |
| 7 | 7 | 0.0645 |
| 70 | 70 | 0.0641 |
| 71 | 71 | 0.293 |
| 72 | 72 | 0.326 |
| 73 | 73 | 0.023 |
| 74 | 74 | 0.165 |
| 75 | 75 | 0.821 |
| 76 | 76 | 0.871 |
| 77 | 77 | 0.0633 |
| 78 | 78 | 0.859 |
| 79 | 79 | 1.89779e-4 |
| 8 | 8 | 0.218 |
| 80 | 80 | 0.48 |
| 81 | 81 | 0.743 |
| 82 | 82 | 0.522 |
| 83 | 83 | 0.197 |
| 84 | 84 | 0.617 |
| 85 | 85 | 0.0321 |
| 86 | 86 | 0.986 |
| 87 | 87 | 0.583 |
| 88 | 88 | 0.709 |
| 89 | 89 | 0.193 |
| 9 | 9 | 0.718 |
| 90 | 90 | 0.858 |
| 91 | 91 | 0.695 |
| 92 | 92 | 0.279 |
| 93 | 93 | 0.889 |
| 94 | 94 | 0.362 |
| 95 | 95 | 0.608 |
| 96 | 96 | 0.734 |
| 97 | 97 | 0.513 |
| 98 | 98 | 0.696 |
| 99 | 99 | 0.0129 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13093
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000274 human mesenchymal precursor cell- ovarian cancer-metastasis sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)
DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
193 (reproductive organ cancer)
2394 (ovarian cancer)
120 (female reproductive organ cancer)
UBERON: Anatomy
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000272 (human ovarian cancer mesenchymal precursor cell sample)
0000274 (human mesenchymal precursor cell- ovarian cancer-metastasis sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
