FFCP PHASE1:Mm9::chr12:109544394..109544413,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=214305 | |EntrezGene=214305 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q14DK5 | |UniProt=Q14DK5 | ||
|association_with_transcript=-66bp_to_ENSMUST00000021685,NM_001044380,uc007ozn.1_5end | |association_with_transcript=-66bp_to_ENSMUST00000021685,NM_001044380,uc007ozn.1_5end | ||
|cluster_id=chr12:109544394..109544413,+ | |||
|description=CAGE_peak_1_at_Hhipl1_5end | |description=CAGE_peak_1_at_Hhipl1_5end | ||
|id=chr12:109544394..109544413,+ | |id=chr12:109544394..109544413,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.20e-11!23;CL:0000337!1.20e-11!23;CL:0002319!1.39e-07!43;CL:0000055!3.13e-07!50;CL:0000221!3.98e-07!44;CL:0000133!3.98e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.66e-19,23;CL:0000337,2.66e-19,23;CL:0000540,1.33e-12,33;CL:0000047,1.33e-12,33;CL:0000031,1.33e-12,33;CL:0000404,1.33e-12,33;CL:0002319,3.33e-12,43;CL:0000393,5.07e-12,39;CL:0000211,5.07e-12,39;CL:0000221,7.48e-12,44;CL:0000133,7.48e-12,44;CL:0002612,9.95e-10,3;CL:0002610,3.24e-09,3;CL:0002611,2.39e-07,2;CL:0002321,2.56e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.24e-14!75;UBERON:0001016!1.24e-14!75;UBERON:0001017!1.73e-14!73;UBERON:0005743!1.73e-14!73;UBERON:0001049!5.57e-14!52;UBERON:0005068!5.57e-14!52;UBERON:0006241!5.57e-14!52;UBERON:0007135!5.57e-14!52;UBERON:0000033!1.13e-12!63;UBERON:0000955!1.13e-12!50;UBERON:0006238!1.13e-12!50;UBERON:0004121!3.10e-12!102;UBERON:0000924!3.10e-12!102;UBERON:0006601!3.10e-12!102;UBERON:0002346!3.36e-12!71;UBERON:0003075!3.36e-12!71;UBERON:0007284!3.36e-12!71;UBERON:0002020!4.46e-12!34;UBERON:0002616!4.96e-12!49;UBERON:0003056!6.84e-12!49;UBERON:0003080!1.50e-10!40;UBERON:0002780!6.25e-10!39;UBERON:0001890!6.25e-10!39;UBERON:0006240!6.25e-10!39;UBERON:0002791!9.28e-09!29;UBERON:0003528!9.28e-09!29;UBERON:0001893!9.28e-09!29;UBERON:0000025!8.44e-08!114;UBERON:0004111!4.53e-07!122;UBERON:0000153!6.71e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.88e-18,73;UBERON:0001016,2.02e-17,75;UBERON:0001948,1.93e-15,5;UBERON:0002315,1.93e-15,5;UBERON:0000073,2.73e-15,54;UBERON:0002240,8.25e-13,6;UBERON:0005174,8.25e-13,6;UBERON:0001137,8.25e-13,6;UBERON:0004121,1.12e-12,95;UBERON:0000924,1.12e-12,95;UBERON:0006601,1.12e-12,95;UBERON:0002020,5.99e-12,34;UBERON:0001049,7.61e-11,52;UBERON:0005068,7.61e-11,52;UBERON:0006241,7.61e-11,52;UBERON:0007135,7.61e-11,52;UBERON:0002257,9.95e-10,3;UBERON:0004684,3.24e-09,3;UBERON:0002275,3.24e-09,3;UBERON:0002346,3.58e-08,64;UBERON:0003075,3.58e-08,64;UBERON:0007284,3.58e-08,64;UBERON:0002256,2.39e-07,2;UBERON:0002950,2.80e-07,4;UBERON:0001891,2.80e-07,4;UBERON:0009616,2.80e-07,4;UBERON:0010286,2.80e-07,4;UBERON:0010371,9.38e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0.550640256485045,0.782391344348039,0.218025156380447,0.439372365468944,0.194429899074283,1.1198913730029,1.43752564364972,0,0,0,0,0,1.54701627683233,1.82084814773638,4.23192783417626,0.633831403506179,1.35537812827653,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0.518448061542388,0.405017814995072,0.420649922702764,2.57085885963423,3.09215957332259,0.489963196859816,0.287536413054709,0,2.20231761998777,1.0214987046815,2.30409799884365,0.659431438650969,0.914876436024097,1.04182674111352,1.3959149950069,2.8138130501584,0.45839474333043,2.94628585473668,3.84403538157578,1.3047961207771,0.075726193333184,0.453429360640713,0.289864488701678,0,0,0,0,0,0.140444420131752,0.170430322578058,0.519572009205738,0.70667914902068,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0.230615497256059,0,0.23517741427141,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0.255457055208591,0,0,0,2.09706895166752,1.37250180845588,0.502617408451458,0.695297280769106,0.511430914660661,1.0389402227978,0.162241263067758,1.52759045775474,0.124406970610093,0,0,0.650602214813519,0.229902104433473,0.900310649026746,0.753524089178575,0.408218994907967,0.2562274405697,0.281105173679186,0.517406741478031,0,0.567318240503458,0.527853372491847,0.876782929710299,0.834141747676794,1.0447564995665,0.61734640922383,0.398068533636986,0,0,0,0,0.234526059981096,0.180062061461015,0.473489471170421,0.590292695242212,0.617068451549513,0.930135779001631,0.268273401399619,0.350296027101508,0.987359099480883,0.164167464079095,0.243206428637567,0,0.219550115291051,0.536825675041487,0.841159794256509,0.411618449517138,0,0,0.426576501070468,0,0.38660238396628,0.403367049246685,0.22237804384487,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0.407302655690628,0,0.210407459670956,0.189709611372772,0,0,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.509235257325564,0.469380496577004,0.502518772325447,0.238043640886014,0,0.315270288212382,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0.275936746304732,0.321101179975584,0.586058432961016,0,0,0.315508219416257,0,0,0,0,0,0,0,0,2.24924921495265,0.283880170416537,1.24645922567079,1.46598263418218,1.15479086080775,0,0,0.604647113929502,0.188605079755898,0,0,0.258428293168221,0.727067458955011,0.356497378384721,0,0,0,0,1.26042765821917,0.905510786479282,0.643011105094777,0.354680467284547,0,0.329098041204242,0.608929898229199,0.704015124191131,0,0,0,0.322928853391811,0.0603129249281559,0,0.164140899745061,0,0.927126510052548,0,0.619160603889667,0.370389054739423,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0.269728692769641,0.330613822901344,0,0.129614973291793,0,0,0,0.165458490457098,0.777804753376191,0.774958940866387,0.506868376472335,0.469428954583016,0.2604087696879,0.104859344425711,0,0,0,0,0.205421914329655,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0,0,0.116876902181569,0.453460767230423,0,0,0,0.386379188064381,1.50145980360946,0.915758121336325,0.428736758158132,0,1.6942555278512,1.38097570952153,0,0.343706364687375,0.685082519770642,0.755393897389701,2.02506750069542,1.80128481289688,0.453142408984205,0,0.103787347584177,0.798049746802062,0,0,0.628839487883947,0,0.666740183404846,0.824140228955577,0.320919209591815,0.758091635291392,0,0.188626341386076,0.280924522409647,0.192075457214608,0.287177344778066,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0.532427418478012,0,0.145346416632329,0.282328141245992,0.338458431566706,0.365855945745545,0.526139422875686,0,0.561142271657738,0,0.29551344712669,0,0.309873682371932,0,0.499621155875892,0.467863216890817,0.429742108096597,0.57386499620653,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0.550640256485045,0.782391344348039,0.218025156380447,0.439372365468944,0.194429899074283,1.1198913730029,1.43752564364972,0,0,0,0,0,1.54701627683233,1.82084814773638,4.23192783417626,0.633831403506179,1.35537812827653,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0.518448061542388,0.405017814995072,0.420649922702764,2.57085885963423,3.09215957332259,0.489963196859816,0.287536413054709,0,2.20231761998777,1.0214987046815,2.30409799884365,0.659431438650969,0.914876436024097,1.04182674111352,1.3959149950069,2.8138130501584,0.45839474333043,2.94628585473668,3.84403538157578,1.3047961207771,0.075726193333184,0.453429360640713,0.289864488701678,0,0,0,0,0,0.140444420131752,0.170430322578058,0.519572009205738,0.70667914902068,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0.230615497256059,0,0.23517741427141,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0.255457055208591,0,0,0,2.09706895166752,1.37250180845588,0.502617408451458,0.695297280769106,0.511430914660661,1.0389402227978,0.162241263067758,1.52759045775474,0.124406970610093,0,0,0.650602214813519,0.229902104433473,0.900310649026746,0.753524089178575,0.408218994907967,0.2562274405697,0.281105173679186,0.517406741478031,0,0.567318240503458,0.527853372491847,0.876782929710299,0.834141747676794,1.0447564995665,0.61734640922383,0.398068533636986,0,0,0,0,0.234526059981096,0.180062061461015,0.473489471170421,0.590292695242212,0.617068451549513,0.930135779001631,0.268273401399619,0.350296027101508,0.987359099480883,0.164167464079095,0.243206428637567,0,0.219550115291051,0.536825675041487,0.841159794256509,0.411618449517138,0,0,0.426576501070468,0,0.38660238396628,0.403367049246685,0.22237804384487,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0.407302655690628,0,0.210407459670956,0.189709611372772,0,0,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.509235257325564,0.469380496577004,0.502518772325447,0.238043640886014,0,0.315270288212382,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0.275936746304732,0.321101179975584,0.586058432961016,0,0,0.315508219416257,0,0,0,0,0,0,0,0,2.24924921495265,0.283880170416537,1.24645922567079,1.46598263418218,1.15479086080775,0,0,0.604647113929502,0.188605079755898,0,0,0.258428293168221,0.727067458955011,0.356497378384721,0,0,0,0,1.26042765821917,0.905510786479282,0.643011105094777,0.354680467284547,0,0.329098041204242,0.608929898229199,0.704015124191131,0,0,0,0.322928853391811,0.0603129249281559,0,0.164140899745061,0,0.927126510052548,0,0.619160603889667,0.370389054739423,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0.269728692769641,0.330613822901344,0,0.129614973291793,0,0,0,0.165458490457098,0.777804753376191,0.774958940866387,0.506868376472335,0.469428954583016,0.2604087696879,0.104859344425711,0,0,0,0,0.205421914329655,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0,0,0.116876902181569,0.453460767230423,0,0,0,0.386379188064381,1.50145980360946,0.915758121336325,0.428736758158132,0,1.6942555278512,1.38097570952153,0,0.343706364687375,0.685082519770642,0.755393897389701,2.02506750069542,1.80128481289688,0.453142408984205,0,0.103787347584177,0.798049746802062,0,0,0.628839487883947,0,0.666740183404846,0.824140228955577,0.320919209591815,0.758091635291392,0,0.188626341386076,0.280924522409647,0.192075457214608,0.287177344778066,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0.532427418478012,0,0.145346416632329,0.282328141245992,0.338458431566706,0.365855945745545,0.526139422875686,0,0.561142271657738,0,0.29551344712669,0,0.309873682371932,0,0.499621155875892,0.467863216890817,0.429742108096597,0.57386499620653,0,0.231867835620421 | ||
|short_description=p1@Hhipl1 | |short_description=p1@Hhipl1 | ||
}} | }} |
Latest revision as of 06:52, 26 September 2015
Short description: | p1@Hhipl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hhipl1_5end |
Coexpression cluster: | NA |
Association with transcript: | -66bp_to_ENSMUST00000021685, NM_001044380, uc007ozn.1_5end |
EntrezGene: | Hhipl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.66e-19 | 23 |
neuroblast (sensu Vertebrata) | 2.66e-19 | 23 |
neuron | 1.33e-12 | 33 |
neuronal stem cell | 1.33e-12 | 33 |
neuroblast | 1.33e-12 | 33 |
electrically signaling cell | 1.33e-12 | 33 |
neural cell | 3.33e-12 | 43 |
electrically responsive cell | 5.07e-12 | 39 |
electrically active cell | 5.07e-12 | 39 |
ectodermal cell | 7.48e-12 | 44 |
neurectodermal cell | 7.48e-12 | 44 |
neuron of the ventral spinal cord | 9.95e-10 | 3 |
raphe nuclei neuron | 3.24e-09 | 3 |
neuron of the dorsal spinal cord | 2.39e-07 | 2 |
embryonic cell | 2.56e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.88e-18 | 73 |
nervous system | 2.02e-17 | 75 |
regional part of spinal cord | 1.93e-15 | 5 |
gray matter of spinal cord | 1.93e-15 | 5 |
regional part of nervous system | 2.73e-15 | 54 |
spinal cord | 8.25e-13 | 6 |
dorsal region element | 8.25e-13 | 6 |
dorsum | 8.25e-13 | 6 |
ectoderm-derived structure | 1.12e-12 | 95 |
ectoderm | 1.12e-12 | 95 |
presumptive ectoderm | 1.12e-12 | 95 |
gray matter | 5.99e-12 | 34 |
neural tube | 7.61e-11 | 52 |
neural rod | 7.61e-11 | 52 |
future spinal cord | 7.61e-11 | 52 |
neural keel | 7.61e-11 | 52 |
ventral horn of spinal cord | 9.95e-10 | 3 |
raphe nuclei | 3.24e-09 | 3 |
reticular formation | 3.24e-09 | 3 |
neurectoderm | 3.58e-08 | 64 |
neural plate | 3.58e-08 | 64 |
presumptive neural plate | 3.58e-08 | 64 |
dorsal horn of spinal cord | 2.39e-07 | 2 |
regional part of midbrain | 2.80e-07 | 4 |
midbrain | 2.80e-07 | 4 |
presumptive midbrain | 2.80e-07 | 4 |
midbrain neural tube | 2.80e-07 | 4 |
ecto-epithelium | 9.38e-07 | 73 |